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Query: NC_007952:2812996:2825726 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 2825726, End: 2826934, Length: 1209

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010676:61098:6109861098622641167Burkholderia phytofirmans PsJN chromosome 2, complete sequencehypothetical protein0645
NC_015633:2327500:2335403233540323365751173Vibrio anguillarum 775 chromosome chromosome I, complete sequenceaspartate-semialdehyde dehydrogenase9e-96350
NC_016944:975725:9860289860289872001173Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein5e-92338
NC_016445:452100:4660004660004671721173Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein5e-92338
NC_012582:997268:1011164101116410123361173Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein5e-92338
NC_012578:936000:9464229464229475941173Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein5e-92338
NC_002505:980595:9890079890079901791173Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein5e-92338
NC_009457:471337:4797844797844809171134Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein7e-91334
NC_017270:885179:892850892850893821972Vibrio cholerae LMA3984-4 chromosome chromosome I, completehypothetical protein4e-75281
NC_014973:1071500:1092181109218110933351155Geobacter sp. M18 chromosome, complete genomehypothetical protein4e-55215
NC_008609:3119502:3127722312772231289061185Pelobacter propionicus DSM 2379, complete genomehypothetical protein5e-45182
NC_009614:947775:9641819641819653741194Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein2e-44179
NC_009614:2034265:2034265203426520354581194Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein2e-44179
NC_009615:21500:3944839448406411194Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein2e-42173
NC_015571:411156:4249694249694261531185Porphyromonas gingivalis TDC60, complete genomeputative delta-aminolevulinic acid dehydratase5e-42172
NC_008554:1177199:1190228119022811913851158Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein7e-35148
NC_009454:358044:3671473671473683341188Pelotomaculum thermopropionicum SI, complete genomehypothetical protein5e-24112
NC_019792:3027515:3030128303012830314891362Natronobacterium gregoryi SP2 chromosome, complete genomehypothetical protein2e-1893.6