Pre_GI: BLASTP Hits

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Query: NC_007952:1416000:1432780 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1432780, End: 1433412, Length: 633

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:4061372:406137240613724061992621Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-48192
NC_011365:1865687:187975018797501880403654Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein4e-47187
NC_014306:4901390:490139049013904902010621Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein1e-46186
NC_017047:1434500:145487514548751455516642Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein2e-44179
NC_015061:1481500:150193215019321502573642Rahnella sp. Y9602 chromosome, complete genomehypothetical protein2e-44179
NC_020064:3825916:383040438304043831012609Serratia marcescens FGI94, complete genomethiosulfate reductase cytochrome B subunit (membrane anchoring protein)3e-43174
NC_015856:4203301:422236242223624223027666Collimonas fungivorans Ter331 chromosome, complete genomethiosulfate reductase cytochrome B subunit (membrane anchoring protein)4e-40164
NC_014910:755192:766606766606767262657Alicycliphilus denitrificans BC chromosome, complete genometransmembrane hydrogenase cytochrome6e-39160
NC_015422:704500:705926705926706582657Alicycliphilus denitrificans K601 chromosome, complete genomeputative transmembrane hydrogenase cytochrome8e-39160
NC_020211:1621000:162556116255611626172612Serratia marcescens WW4, complete genomethiosulfate reductase cytochrome subunit B4e-38157
NC_007298:2769525:279183227918322792428597Dechloromonas aromatica RCB, complete genomeputative transmembrane hydrogenase cytochrome B-type subunit oxidoreductase protein1e-37155
NC_003295:659837:666136666136666774639Ralstonia solanacearum GMI1000, complete genomePUTATIVE TRANSMEMBRANE HYDROGENASE CYTOCHROME B-TYPE SUBUNIT OXIDOREDUCTASE PROTEIN4e-37154
NC_014311:2385666:240046124004612401099639Ralstonia solanacearum PSI07 chromosome, complete genometransmembrane hydrogenase cytochrome B-type subunit4e-37154
NC_016616:134449:161978161978162574597Dechlorosoma suillum PS chromosome, complete genomethiosulfate reductase cytochrome B subunit (membrane anchoring protein)1e-34146
NC_013592:713036:719216719216719815600Dickeya dadantii Ech586, complete genomehypothetical protein9e-32136
NC_008253:4735418:476946247694624770061600Escherichia coli 536, complete genomehypothetical membrane protein5e-24110
NC_012779:916000:926219926219926560342Edwardsiella ictaluri 93-146, complete genomeputative B-type cytochomre4e-21101
NC_004431:3409389:341555134155513415946396Escherichia coli CFT073, complete genomehypothetical protein3e-1272
NC_008536:1778500:177903117790311779708678Solibacter usitatus Ellin6076, complete genomeThiosulfate reductase cytochrome B subunit (membrane anchoring protein)-like protein5e-1064.7
NC_020064:3998715:403749740374974038360864Serratia marcescens FGI94, complete genomethiosulfate reductase cytochrome B subunit (membrane anchoring protein)5e-0961.2
NC_018515:937994:954045954045954635591Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit4e-0754.7
NC_015499:352934:363157363157363738582Thermodesulfobium narugense DSM 14796 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit2e-0652.4