Pre_GI: BLASTP Hits

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Query: NC_007952:1416000:1432007 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1432007, End: 1432783, Length: 777

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020064:3825916:383100238310023831769768Serratia marcescens FGI94, complete genomesulfite oxidase-like oxidoreductase9e-98356
NC_014306:4901390:490064249006424901397756Erwinia billingiae Eb661, complete genomeOxidoreductase, molybdopterin binding3e-97354
NC_017047:1434500:145411814541181454882765Rahnella aquatilis HX2 chromosome, complete genomeoxidoreductase molybdopterin binding protein2e-96352
NC_015061:1481500:150117515011751501939765Rahnella sp. Y9602 chromosome, complete genomeoxidoreductase molybdopterin binding protein2e-96352
NC_016616:134449:162585162585163373789Dechlorosoma suillum PS chromosome, complete genomesulfite oxidase-like oxidoreductase1e-88326
NC_020211:1621000:162618316261831626959777Serratia marcescens WW4, complete genomeoxidoreductase molybdopterin binding protein2e-86318
NC_015856:4203301:422304542230454223818774Collimonas fungivorans Ter331 chromosome, complete genomeoxidoreductase, molybdopterin binding protein9e-84310
NC_007298:2769525:279244127924412793229789Dechloromonas aromatica RCB, complete genomeOxidoreductase, molybdopterin binding1e-81303
NC_014910:755192:765821765821766609789Alicycliphilus denitrificans BC chromosome, complete genomeoxidoreductase molybdopterin binding protein5e-81300
NC_003295:659837:666796666796667569774Ralstonia solanacearum GMI1000, complete genomehypothetical protein8e-81300
NC_015422:704500:705141705141705929789Alicycliphilus denitrificans K601 chromosome, complete genomeoxidoreductase molybdopterin binding protein1e-80299
NC_008253:4735418:476869247686924769462771Escherichia coli 536, complete genomehypothetical protein4e-80297
NC_012779:916000:926829926829927617789Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-79295
NC_014311:2385666:239966623996662400439774Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein6e-79293
NC_013592:713036:719826719826720596771Dickeya dadantii Ech586, complete genomeoxidoreductase molybdopterin binding protein9e-78290
NC_011365:1865687:188040018804001881149750Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeoxidoreductase molybdopterin-binding protein1e-76286
NC_004431:3409389:341605634160563416892837Escherichia coli CFT073, complete genomehypothetical protein2e-75282
NC_020064:3998715:403672440367244037500777Serratia marcescens FGI94, complete genomesulfite oxidase-like oxidoreductase3e-36151
NC_008536:1778500:177969517796951780465771Solibacter usitatus Ellin6076, complete genomeoxidoreductase, molybdopterin binding1e-29130
NC_014643:535708:5357085357085372641557Rothia dentocariosa ATCC 17931 chromosome, complete genomeoxidoreductase2e-1789.4
NC_008782:752686:754112754112755110999Acidovorax sp. JS42, complete genomeoxidoreductase, molybdopterin binding4e-1788.6
NC_014212:3091571:3112047311204731134441398Meiothermus silvanus DSM 9946 chromosome, complete genomeoxidoreductase molybdopterin binding protein5e-1788.2
NC_011992:717107:720683720683721681999Acidovorax ebreus TPSY, complete genomeoxidoreductase molybdopterin binding1e-1686.7
NC_009049:80184:857638576386668906Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceoxidoreductase, molybdopterin binding6e-1684.3
NC_013922:3696697:371042337104233711121699Natrialba magadii ATCC 43099 chromosome, complete genomeoxidoreductase molybdopterin binding protein7e-1684.3
NC_008009:1264791:127107712710771272033957Acidobacteria bacterium Ellin345, complete genomeSulfite oxidase-like enzyme1e-1584
NC_013894:543901:562698562698563291594Thermocrinis albus DSM 14484 chromosome, complete genomeoxidoreductase molybdopterin binding protein1e-1583.6
NC_008781:708811:708811708811709809999Polaromonas naphthalenivorans CJ2, complete genomeoxidoreductase, molybdopterin binding6e-1581.3
NC_012914:569471:5911715911715924211251Paenibacillus sp. JDR-2, complete genomeoxidoreductase molybdopterin binding1e-1480.5
NC_007802:4071006:408656840865684087548981Jannaschia sp. CCS1, complete genomeTwin-arginine translocation pathway signal1e-1480.5
NC_008044:136844:142784142784143686903Silicibacter sp. TM1040, complete genomeTwin-arginine translocation pathway signal2e-1479.7
NC_020908:4263552:427801042780104278903894Octadecabacter arcticus 238, complete genomeputative molybdopterin-binding oxidoreductase4e-1478.6
NC_014098:1670327:168005516800551680678624Bacillus tusciae DSM 2912 chromosome, complete genomeoxidoreductase molybdopterin binding protein5e-1478.2
NC_015563:1172745:117274511727451173725981Delftia sp. Cs1-4 chromosome, complete genomesulfoxide reductase catalytic subunit yedY6e-1477.8
NC_012483:3529895:352989535298953530863969Acidobacterium capsulatum ATCC 51196, complete genomeoxidoreductase, molybdopterin-binding9e-1477.4
NC_002695:2655445:2664016266401626650201005Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein8e-1374.3
NC_011353:2563056:2571627257162725726311005Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesulfite oxidase subunit YedY8e-1374.3
NC_013008:2561586:2570608257060825716121005Escherichia coli O157:H7 str. TW14359 chromosome, complete genomesulfite oxidase subunit YedY8e-1374.3
NC_013941:2425233:2433804243380424348081005Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein8e-1374.3
NC_002655:2730659:2739231273923127402351005Escherichia coli O157:H7 EDL933, complete genomehypothetical protein8e-1374.3
NC_009952:592000:615171615171616088918Dinoroseobacter shibae DFL 12, complete genomeoxidoreductase molybdopterin binding8e-1374.3
NC_016822:2201388:2216064221606422170681005Shigella sonnei 53G, complete genomeTMAO/DMSO reductase9e-1373.9
NC_013364:2522888:2531437253143725324411005Escherichia coli O111:H- str. 11128, complete genomeputative reductase9e-1373.9
NC_011741:2091249:2101184210118421021881005Escherichia coli IAI1 chromosome, complete genomeputative sulfite oxidase subunit YedY9e-1373.9
NC_011415:2248417:2257417225741722584211005Escherichia coli SE11 chromosome, complete genomeputative sulfite oxidase subunit YedY9e-1373.9
NC_009801:2159123:2168944216894421699481005Escherichia coli E24377A, complete genomeoxidoreductase, molybdopterin binding9e-1373.9
CU928160:2091249:2101184210118421021881005Escherichia coli IAI1 chromosome, complete genomeexported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export9e-1373.9
NC_008563:2041345:2046727204672720477311005Escherichia coli APEC O1, complete genomeYedY9e-1373.9
NC_004741:2009769:2018269201826920192731005Shigella flexneri 2a str. 2457T, complete genome1e-1273.9
NC_008258:2045000:2050260205026020512641005Shigella flexneri 5 str. 8401, complete genome1e-1273.9
NC_007613:1038000:1052698105269810537021005Shigella boydii Sb227, complete genome1e-1273.9
AC_000091:2027648:2041615204161520426191005Escherichia coli W3110 DNA, complete genomepredicted reductase9e-1373.9
NC_000913:2028472:2037502203750220385061005Escherichia coli K12, complete genomehypothetical protein9e-1373.9
NC_012967:1967675:1977477197747719784811005Escherichia coli B str. REL606 chromosome, complete genomeputative sulfite oxidase subunit YedY9e-1373.9
NC_016902:1902431:1913962191396219149661005Escherichia coli KO11FL chromosome, complete genomeoxidoreductase molybdopterin binding protein9e-1373.9
NC_013353:2272919:2278629227862922796331005Escherichia coli O103:H2 str. 12009, complete genomereductase9e-1373.9
NC_010498:1210145:1218917121891712199211005Escherichia coli SMS-3-5, complete genomeoxidoreductase, molybdopterin binding9e-1373.9
CP002516:1902431:1913962191396219149661005Escherichia coli KO11, complete genomeoxidoreductase molybdopterin binding protein9e-1373.9
CP002185:2181936:2190889219088921918931005Escherichia coli W, complete genomepredicted reductase9e-1373.9
AP010958:2272919:2278629227862922796331005Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted reductase9e-1373.9
NC_009800:2049346:2058578205857820595821005Escherichia coli HS, complete genomeoxidoreductase, molybdopterin binding9e-1373.9
NC_012947:1769438:1796855179685517978591005Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completesulfite oxidase subunit YedY9e-1373.9
NC_012759:1920955:1929985192998519309891005Escherichia coli BW2952 chromosome, complete genomeputative sulfite oxidase subunit YedY9e-1373.9
NC_004431:2185750:2191116219111621921201005Escherichia coli CFT073, complete genomehypothetical protein9e-1373.9
NC_015730:3853065:386899538689953869900906Roseobacter litoralis Och 149 chromosome, complete genomesulfoxide reductase catalytic subunit YedY2e-1273.2
NC_003911:3453764:346895934689593469858900Silicibacter pomeroyi DSS-3, complete genomehypothetical protein2e-1272.8
NC_013665:2074587:208580120858012086514714Methanocella paludicola SANAE, complete genomehypothetical protein2e-1272.8
NC_008209:695269:700873700873701778906Roseobacter denitrificans OCh 114, complete genomehypothetical protein3e-1272.4
NC_012968:1191037:119222511922251193223999Methylotenera mobilis JLW8, complete genomeoxidoreductase molybdopterin binding4e-1271.6
NC_008686:50750:564285642857324897Paracoccus denitrificans PD1222 chromosome 1, complete sequenceoxidoreductase, molybdopterin binding5e-1271.6
NC_020911:18500:202942029421202909Octadecabacter antarcticus 307, complete genomeputative molybdopterin-binding oxidoreductase6e-1271.2
NC_008228:2450700:245370324537032454701999Pseudoalteromonas atlantica T6c, complete genomeoxidoreductase, molybdopterin binding3e-1168.9
NC_018643:320197:332010332010332903894Alpha proteobacterium HIMB5 chromosome, complete genomemolybdopterin-dependent oxidoreductase6e-1168.2
NC_015690:790500:797334797334797927594Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYuiH5e-1168.2
NC_016935:789849:796860796860797453594Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein5e-1168.2
NC_011916:2967624:298794829879482988889942Caulobacter crescentus NA1000 chromosome, complete genomesulfite oxidase subunit YedY8e-1167.8
NC_002696:2941644:296196829619682962909942Caulobacter crescentus CB15, complete genomehypothetical protein8e-1167.8
NC_008253:1938975:194464019446401945275636Escherichia coli 536, complete genomehypothetical protein9e-1167.4
NC_009656:115390:130073130073130720648Pseudomonas aeruginosa PA7 chromosome, complete genomemolybdopterin binding oxidoreductase9e-1167.4
NC_012491:4987280:500633550063355006931597Brevibacillus brevis NBRC 100599, complete genomehypothetical protein5e-1065.1
NC_017275:2327479:232858223285822329211630Sulfolobus islandicus HVE10/4 chromosome, complete genomeoxidoreductase molybdopterin binding protein6e-1064.7
NC_003106:1065476:107722010772201077678459Sulfolobus tokodaii str. 7, complete genomehypothetical protein8e-1064.3
NC_017192:683493:685559685559686518960Arcobacter sp. L, complete genomeoxidoreductase1e-0963.5
NC_011758:369704:1867186730781212Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeoxidoreductase molybdopterin binding1e-0963.5
NC_010505:5583000:5583260558326055843451086Methylobacterium radiotolerans JCM 2831, complete genomeSulfite oxidase2e-0963.2
NC_009937:1733196:173631117363111737093783Azorhizobium caulinodans ORS 571, complete genomeoxidoreductase3e-0962.4
NC_010511:225434:244425244425245393969Methylobacterium sp. 4-46 chromosome, complete genomeputative sulfite oxidase subunit YedY3e-0962.4
NC_015594:1210736:1228268122826812294731206Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeSulfite oxidase5e-0961.6
NC_012988:731790:7317907317907329951206Methylobacterium extorquens DM4, complete genomesulfite:cytochrome C oxidoreductase subunit A6e-0961.2
NC_011892:77975:1085571085571097681212Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeoxidoreductase molybdopterin binding1e-0860.5
NC_020209:3797830:3811007381100738120201014Pseudomonas poae RE*1-1-14, complete genomeTMAO/DMSO reductase1e-0860.5
NC_009142:1282589:1285306128530612864091104Saccharopolyspora erythraea NRRL 2338, complete genomenitrate reductase (NADH)2e-0859.7
NC_014758:1387470:140455014045501405146597Calditerrivibrio nitroreducens DSM 19672 chromosome, completeoxidoreductase molybdopterin binding protein5e-0858.2
NC_008701:1226797:124094112409411241408468Pyrobaculum islandicum DSM 4184, complete genomeoxidoreductase, molybdopterin binding1e-0756.6
NC_003295:856775:8575088575088586471140Ralstonia solanacearum GMI1000, complete genomePROBABLE SULFITE:CYTOCHROME C OXIDOREDUCTASE (SUBUNIT A) OXIDOREDUCTASE PROTEIN4e-0755.5
NC_014217:3431878:3431878343187834330951218Starkeya novella DSM 506 chromosome, complete genomeoxidoreductase molybdopterin binding protein5e-0755.1
NC_009720:251703:2607632607632619801218Xanthobacter autotrophicus Py2, complete genomeoxidoreductase molybdopterin binding8e-0754.3
NC_009720:2945655:2961561296156129627781218Xanthobacter autotrophicus Py2, complete genomeoxidoreductase molybdopterin binding8e-0754.3
NC_010730:813534:813534813534814223690Sulfurihydrogenibium sp. YO3AOP1, complete genomeoxidoreductase molybdopterin binding1e-0653.5
NC_011886:177039:1792241792241808191596Arthrobacter chlorophenolicus A6, complete genomeoxidoreductase molybdopterin binding3e-0652.4
NC_009142:2963831:298611829861182986624507Saccharopolyspora erythraea NRRL 2338, complete genomeoxidoreductase, molybdopterin binding3e-0652.4
NC_014666:5057000:5057532505753250587521221Frankia sp. EuI1c chromosome, complete genomeoxidoreductase molybdopterin binding protein4e-0652
NC_010505:5583000:5585943558594355871661224Methylobacterium radiotolerans JCM 2831, complete genomeoxidoreductase molybdopterin binding9e-0650.8