Pre_GI: BLASTP Hits

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Query: NC_007952:1416000:1425966 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1425966, End: 1427084, Length: 1119

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014655:2747399:2760480276048027615921113Leadbetterella byssophila DSM 17132 chromosome, complete genomealdose 1-epimerase6e-93341
NC_015966:521703:5249455249455260961152Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeAldose 1-epimerase7e-82304
NC_010995:948041:9532399532399543031065Cellvibrio japonicus Ueda107, complete genomealdose 1-epimerase1e-79296
NC_014532:2066074:2079432207943220806431212Halomonas elongata DSM 2581, complete genomealdose 1-epimerase4e-79295
NC_008536:1778500:1788348178834817894991152Solibacter usitatus Ellin6076, complete genomeAldose 1-epimerase1e-78293
NC_015556:130437:1485221485221496671146Pseudomonas fulva 12-X chromosome, complete genomeAldose 1-epimerase1e-70267
NC_008010:222516:226286226286227251966Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceAldose 1-epimerase2e-70266
NC_012529:301921:3039973039973051241128Deinococcus deserti VCD115 plasmid 2, complete sequencealdose 1-epimerase5e-70265
NC_013642:942767:9493369493369504241089Thermotoga naphthophila RKU-10, complete genomeAldose 1-epimerase2e-69263
NC_012781:302387:3140893140893151321044Eubacterium rectale ATCC 33656, complete genomealdose 1-epimerase1e-63244
NC_009615:4563831:4571361457136145725091149Parabacteroides distasonis ATCC 8503 chromosome, complete genomealdose 1-epimerase2e-63242
NC_009648:838000:8552928552928563351044Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomealdose 1-epimerase1e-59230
NC_014387:281157:2868342868342878771044Butyrivibrio proteoclasticus B316 chromosome 1, complete genomealdose 1-epimerase1e-59230
NC_016613:2103792:2106748210674821078121065Vibrio sp. EJY3 chromosome 1, complete sequencealdose 1-epimerase2e-59229
NC_015977:3424178:3427172342717234282091038Roseburia hominis A2-183 chromosome, complete genomealdose 1-epimerase7e-59228
NC_007952:444616:4598974598974610121116Burkholderia xenovorans LB400 chromosome 2, complete sequenceAldose 1-epimerase1e-58227
NC_015275:654959:6618086618086628631056Clostridium lentocellum DSM 5427 chromosome, complete genomeAldose 1-epimerase4e-56218
NC_011149:779903:8009988009988020381041Salmonella enterica subsp. enterica serovar Agona str. SL483,galactose mutarotase2e-53210
NC_011083:862901:8856078856078866471041Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,galactose mutarotase2e-53210
NC_012125:793812:8145378145378155771041Salmonella enterica subsp. enterica serovar Paratyphi C strainaldose 1-epimerase2e-53210
NC_012214:2673058:2676973267697326780071035Erwinia pyrifoliae Ep1/96, complete genomeGalactose 1-epimerase (Mutarotase)1e-53210
NC_003197:815964:8373398373398383791041Salmonella typhimurium LT2, complete genomegalactose-1-epimerase2e-53209
NC_011080:819103:8416908416908427301041Salmonella enterica subsp. enterica serovar Newport str. SL254,galactose mutarotase2e-53209
NC_011274:793681:8143498143498153891041Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91aldose 1-epimerase2e-53209
NC_016810:819489:8365938365938376331041Salmonella enterica subsp. enterica serovar Typhimurium straldose 1-epimerase (mutarotase)2e-53209
NC_016856:819482:8376798376798387191041Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Saldose 1-epimerase2e-53209
NC_016857:819429:8365938365938376331041Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74aldose 1-epimerase2e-53209
NC_016860:857500:8761678761678772071041Salmonella enterica subsp. enterica serovar Typhimurium straldose 1-epimerase2e-53209
NC_016863:819478:8376798376798387191041Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1aldose 1-epimerase2e-53209
NC_017046:819414:8365818365818376211041Salmonella enterica subsp. enterica serovar Typhimurium str. 798aldose 1-epimerase (mutarotase)2e-53209
NC_011205:839425:8615208615208625601041Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853aldose 1-epimerase2e-53209
NC_013411:2739989:2758363275836327594091047Geobacillus sp. Y412MC61, complete genomeAldose 1-epimerase1e-52207
NC_014915:1880748:1898301189830118993471047Geobacillus sp. Y412MC52 chromosome, complete genomeAldose 1-epimerase1e-52207
NC_011294:781170:7964877964877975271041Salmonella enterica subsp. enterica serovar Enteritidis straldose 1-epimerase7e-53207
NC_006300:600516:6024696024696035271059Mannheimia succiniciproducens MBEL55E, complete genomeGalM protein3e-52205
NC_013971:1283942:1303157130315713041911035Erwinia amylovora ATCC 49946 chromosome, complete genomealdose 1-epimerase5e-52205
NC_013961:1246454:1265627126562712666611035Erwinia amylovora, complete genomegalactose-1-epimerase (mutarotase)5e-52205
NC_014206:1694330:1720168172016817212201053Geobacillus sp. C56-T3 chromosome, complete genomealdose 1-epimerase1e-51204
NC_010694:2565580:2569508256950825705421035Erwinia tasmaniensis, complete genomeGalactose 1-epimerase (Mutarotase)6e-52204
NC_020210:1951746:1953780195378019548321053Geobacillus sp. GHH01, complete genomealdose 1-epimerase7e-51201
NC_009328:1867971:1882092188209218831411050Geobacillus thermodenitrificans NG80-2 chromosome, complete genomealdose 1-epimerase5e-50198
NC_013411:2767400:2771371277137127724231053Geobacillus sp. Y412MC61, complete genomeAldose 1-epimerase8e-50197
NC_014915:1909275:1911309191130919123611053Geobacillus sp. Y412MC52 chromosome, complete genomeAldose 1-epimerase8e-50197
NC_006510:1901954:1905459190545919065051047Geobacillus kaustophilus HTA426, complete genomealdose 1-epimerase1e-48194
NC_014328:85290:1159741159741170081035Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative aldose 1-epimerase1e-40167
NC_013515:347671:3795803795803806321053Streptobacillus moniliformis DSM 12112, complete genomeAldose 1-epimerase8e-40164
NC_012470:258287:2731152731152741581044Streptococcus equi subsp. zooepidemicus, complete genomealdose 1-epimerase (mutarotase)4e-33142
NC_015687:1478668:1494486149448614955231038Clostridium acetobutylicum DSM 1731 chromosome, complete genomealdose-1-epimerase5e-33142
NC_010380:124655:1499451499451509821038Streptococcus pneumoniae Hungary19A-6, complete genomealdose 1-epimerase4e-32139
NC_012947:3015985:303556030355603036180621Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete3e-30133
NC_017347:2437902:2458388245838824594071020Staphylococcus aureus subsp. aureus T0131 chromosome, completealdose 1-epimerase3e-23109