Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:769500:794358 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 794358, End: 795872, Length: 1515

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007951:2206263:2220092222009222216061515Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase, R6 like0975
NC_007952:3238241:3239089323908932406031515Burkholderia xenovorans LB400 chromosome 2, complete sequenceIntegrase, catalytic region0975
NC_007951:2087385:2106075210607521075891515Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase0975
NC_007951:1928906:1951349195134919528631515Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase integrase, IstA0975
NC_010086:1816378:1849654184965418511681515Burkholderia multivorans ATCC 17616 chromosome 2, completeIntegrase catalytic region0935
NC_010087:376918:4234224234224249361515Burkholderia multivorans ATCC 17616 chromosome 3, completeIntegrase catalytic region0935
NC_010805:575709:6241366241366256201485Burkholderia multivorans ATCC 17616 chromosome 2, completeISBmu7b transposase0913
NC_010801:481601:4999224999225014061485Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu7a transposase0913
NC_016626:1669477:1669477166947716709581482Burkholderia sp. YI23 plasmid byi_1p, complete sequenceISBmu7a transposase0831
NC_004463:5540924:5543986554398655455361551Bradyrhizobium japonicum USDA 110, complete genomeputative transposase0696
NC_004463:1872537:1871026187102618725761551Bradyrhizobium japonicum USDA 110, complete genomeputative transposase0696
NC_009467:117812:1334651334651349941530Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequenceintegrase catalytic subunit0658
NC_015186:2197236:2198803219880322003051503Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element0654
NC_008686:405159:4312344312344327511518Paracoccus denitrificans PD1222 chromosome 1, complete sequenceIntegrase, catalytic region0650
NC_003047:3360000:3395946339594633974601515Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSPOSASE NUMBER 1 FOR INSERTION SEQUENCE ISRM270645
NC_017325:1897500:1911800191180019133081509Sinorhizobium meliloti SM11 chromosome, complete genometransposase2e-163576
NC_015590:145353:1473581473581488661509Sinorhizobium meliloti AK83 chromosome 1, complete sequenceintegrase catalytic subunit2e-163576
NC_007925:1085500:1100823110082311023161494Rhodopseudomonas palustris BisB18, complete genomeIntegrase, catalytic region2e-127456
NC_016626:1781956:1785372178537217868711500Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase, IS21 family9e-126450
NC_006513:148950:1583071583071598031497Azoarcus sp. EbN1, complete genometransposase3e-125449
NC_007951:4741620:4756244475624447577371494Burkholderia xenovorans LB400 chromosome 1, complete sequenceputative transposase with integrase domain1e-124447
NC_007951:1971584:1985835198583519873281494Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase integrase protein1e-124447
NC_012791:2832001:2846754284675428482471494Variovorax paradoxus S110 chromosome 1, complete genometransposase2e-121436
NC_016585:1004000:1024581102458110260561476Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceTransposase of ISAli13, IS21 family, ORFA8e-121434
NC_007951:2904644:2940441294044129419341494Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase6e-120431
NC_002678:4859111:487688148768814877831951Mesorhizobium loti MAFF303099, complete genometransposase7e-120431
NC_016590:1183470:1188216118821611897151500Burkholderia sp. YI23 chromosome 3, complete sequenceintegrase catalytic subunit1e-117423
NC_011206:2019577:2031455203145520329391485Acidithiobacillus ferrooxidans ATCC 53993, complete genomeIntegrase catalytic region2e-106386
NC_011884:2194767:2208132220813222096821551Cyanothece sp. PCC 7425, complete genome7e-102371
NC_011884:2921618:2939048293904829405981551Cyanothece sp. PCC 7425, complete genome7e-102371
NC_011884:4366831:4385541438554143870911551Cyanothece sp. PCC 7425, complete genome7e-102371
NC_011884:1998559:2011735201173520132851551Cyanothece sp. PCC 7425, complete genome7e-102371
NC_008750:1253354:1265548126554812670531506Shewanella sp. W3-18-1, complete genomeIntegrase, catalytic region5e-101368
NC_004431:1401681:1403622140362214051211500Escherichia coli CFT073, complete genomehypothetical protein7e-100364
NC_004431:3409389:3445858344585834473571500Escherichia coli CFT073, complete genomehypothetical protein7e-100364
NC_009931:117904:1359021359021376381737Acaryochloris marina MBIC11017 plasmid pREB6, complete sequencetransposase, putative1e-99363
NC_007941:11319:2851228512300111500Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein8e-99361
NC_009052:4168776:4168776416877641702781503Shewanella baltica OS155, complete genomeIntegrase, catalytic region2e-96353
NC_009052:3381943:3381943338194333834451503Shewanella baltica OS155, complete genomeIntegrase, catalytic region5e-96352
NC_009052:1899954:1916952191695219184541503Shewanella baltica OS155, complete genomeIntegrase, catalytic region4e-96352
NC_009052:4437649:4448857444885744503591503Shewanella baltica OS155, complete genomeIntegrase, catalytic region4e-96352
NC_009052:1211989:1226697122669712281991503Shewanella baltica OS155, complete genomeIntegrase, catalytic region4e-96352
NC_009052:3381943:3384965338496533864671503Shewanella baltica OS155, complete genomeIntegrase, catalytic region4e-96352
NC_009052:2107692:2119764211976421212661503Shewanella baltica OS155, complete genomeIntegrase, catalytic region4e-96352
NC_009052:4335754:4339397433939743408991503Shewanella baltica OS155, complete genomeIntegrase, catalytic region4e-96352
NC_008740:1484531:1504870150487015063361467Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region7e-91335
NC_009483:66502:7784577845792931449Geobacter uraniireducens Rf4 chromosome, complete genomeintegrase catalytic subunit1e-71271
NC_014973:3290545:3305576330557633070631488Geobacter sp. M18 chromosome, complete genomeintegrase catalytic subunit8e-71268
NC_004431:1166568:116711211671121167843732Escherichia coli CFT073, complete genome2e-57223
NC_002678:4859111:487782248778224878388567Mesorhizobium loti MAFF303099, complete genometransposase6e-53209
NC_017249:9198000:920239192023919202693303Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-25117
NC_008253:3122148:314004131400413140535495Escherichia coli 536, complete genomehypothetical protein1e-20101
NC_004431:1166568:116656811665681167122555Escherichia coli CFT073, complete genome7e-1789.4
NC_008253:3122148:313966431396643139888225Escherichia coli 536, complete genomehypothetical protein5e-1376.3
NC_008541:472643:4841864841864859401755Arthrobacter sp. FB24 chromosome 1, complete sequenceTransposase and inactivated derivatives-like protein2e-1274.7
NC_014158:233733:2355142355142372111698Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase3e-1273.6
NC_005773:1333863:1338288133828813397781491Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy20, transposase IstA6e-1272.8
NC_009656:115390:1383671383671398751509Pseudomonas aeruginosa PA7 chromosome, complete genometransposase6e-1169.3
NC_009434:695582:7370807370807385521473Pseudomonas stutzeri A1501, complete genometransposase8e-1168.9
NC_009434:608765:6742836742836757551473Pseudomonas stutzeri A1501, complete genometransposase9e-1168.9
NC_015740:3486226:3501252350125235027601509Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetransposase1e-1068.6
NC_015222:983647:9839549839549859481995Nitrosomonas sp. AL212 chromosome, complete genomeIstB domain-containing protein ATP-binding protein2e-1067.8
NC_008048:389645:4244344244344259631530Sphingopyxis alaskensis RB2256, complete genomeIntegrase, catalytic region2e-1067.8
NC_015740:141910:1505841505841520921509Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetransposase3e-1067.4
NC_013929:5850599:5857445585744558590911647Streptomyces scabiei 87.22 chromosome, complete genometransposase3e-1067.4
NC_014910:4207227:4215033421503342165591527Alicycliphilus denitrificans BC chromosome, complete genomeintegrase catalytic region protein4e-1067
NC_014910:465980:4967444967444982701527Alicycliphilus denitrificans BC chromosome, complete genomeintegrase catalytic region protein4e-1067
NC_017167:1648913:1737316173731617387821467Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1transposase3e-1067
NC_015222:1607757:1609077160907716113802304Nitrosomonas sp. AL212 chromosome, complete genomeIstB domain-containing protein ATP-binding protein5e-1066.2
NC_015733:2581324:2581324258132425828321509Pseudomonas putida S16 chromosome, complete genomeISPsy20, transposase IstA8e-1065.9
NC_008782:752686:7781637781637796951533Acidovorax sp. JS42, complete genomeIntegrase, catalytic region1e-0965.5
NC_010125:2483122:2511209251120925127981590Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase1e-0965.5
NC_008782:1277117:1289444128944412909761533Acidovorax sp. JS42, complete genomeIntegrase, catalytic region1e-0965.5
NC_008782:3252092:3268020326802032695521533Acidovorax sp. JS42, complete genomeIntegrase, catalytic region1e-0965.5
NC_008782:867344:8724598724598739911533Acidovorax sp. JS42, complete genomeIntegrase, catalytic region1e-0965.5
NC_015733:3736104:3812470381247038139781509Pseudomonas putida S16 chromosome, complete genomeISPsy20, transposase IstA1e-0965.5
NC_013235:2257899:2291364229136422929681605Nakamurella multipartita DSM 44233, complete genomeIstA29e-1065.5
NC_015740:3678342:3711523371152337130311509Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetransposase1e-0965.1
NC_011365:738321:7645157645157660381524Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeintegrase catalytic subunit2e-0964.7
NC_011365:1969198:1987862198786219893851524Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeintegrase catalytic subunit2e-0964.7
NC_014006:2932959:294566929456692945893225Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein3e-0963.9
NC_009615:4642500:4645290464529046468881599Parabacteroides distasonis ATCC 8503 chromosome, complete genometransposase4e-0963.2
NC_009615:322107:3407383407383423361599Parabacteroides distasonis ATCC 8503 chromosome, complete genometransposase4e-0963.2
NC_009615:2503465:2512746251274625143441599Parabacteroides distasonis ATCC 8503 chromosome, complete genometransposase4e-0963.2
NC_011365:738321:7383217383217397871467Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeintegrase catalytic subunit5e-0963.2
NC_015733:2963548:2974239297423929754981260Pseudomonas putida S16 chromosome, complete genome7e-0962.4
NC_014098:2809689:2824299282429928255401242Bacillus tusciae DSM 2912 chromosome, complete genomeIntegrase catalytic region8e-0962.4
NC_015733:715947:7260087260087272191212Pseudomonas putida S16 chromosome, complete genome1e-0862
NC_015733:4130000:4143084414308441443521269Pseudomonas putida S16 chromosome, complete genome1e-0862
NC_008782:3167440:3220651322065132221651515Acidovorax sp. JS42, complete genomeIntegrase, catalytic region1e-0862
NC_015850:1614965:1614965161496516160321068Acidithiobacillus caldus SM-1 chromosome, complete genomeputative transposase1e-0861.6
NC_011989:2795811:2816283281628328178001518Agrobacterium vitis S4 chromosome 1, complete sequenceIS21 family transposase3e-0860.5
NC_015422:4508028:4514972451497245164981527Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase catalytic subunit7e-0859.3
NC_015422:910292:9221999221999237251527Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase catalytic subunit7e-0859.3
NC_013446:2164974:2191577219157721931031527Comamonas testosteroni CNB-2, complete genomeIstA8e-0858.9
NC_013446:2237854:2242782224278222443081527Comamonas testosteroni CNB-2, complete genomeIstA8e-0858.9
NC_009254:700891:7228347228347243391506Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit4e-0756.6
NC_011757:39881:4374143741452461506Methylobacterium chloromethanicum CM4, complete genomeIntegrase catalytic region4e-0756.6
NC_012724:3070386:3075628307562830771331506Burkholderia glumae BGR1 chromosome 1, complete genomeIntegrase, catalytic region4e-0756.6
NC_012721:2556160:2575408257540825769131506Burkholderia glumae BGR1 chromosome 2, complete genomeIntegrase, catalytic region4e-0756.6
NC_012724:359444:3851853851853866991515Burkholderia glumae BGR1 chromosome 1, complete genomeIntegrase, catalytic region4e-0756.6
NC_015383:229036:2298262298262310851260Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence4e-0756.6
NC_016860:4055117:4078672407867240801951524Salmonella enterica subsp. enterica serovar Typhimurium strtransposase for insertion sequences is13266e-0755.8
NC_009140:121107:1367351367351382581524Salmonella enterica enterica sv Newport str. SL254, completetransposase IstA for insertion sequence IS13266e-0755.8
NC_012987:32296:5172351723532221500Methylobacterium extorquens DM4 plasmid p1METDI, complete sequencetransposase of ISMdi27, IS21 family (ORF 1)2e-0654.7
NC_009511:2726296:2735985273598527374901506Sphingomonas wittichii RW1 chromosome, complete genomeintegrase catalytic subunit5e-0653.1