Pre_GI: BLASTP Hits

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Query: NC_007951:769500:786424 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 786424, End: 786987, Length: 564

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:5077410:5090808509080850925711764Pseudomonas poae RE*1-1-14, complete genomephage integrase5e-43173
NC_014391:2579919:2588716258871625897711056Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS116/IS110/IS902 family protein1e-28125
NC_013235:2257899:2273659227365922747051047Nakamurella multipartita DSM 44233, complete genometransposase IS116/IS110/IS902 family protein1e-24112
NC_008253:4735418:4758208475820847592841077Escherichia coli 536, complete genomeputative transposase3e-23108
NC_014722:2260489:226734022673402267603264Burkholderia rhizoxinica HKI 454, complete genometransposase4e-22104
NC_006087:2292791:2310939231093923120481110Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, ISlxx23e-21101
NC_006087:345976:3767123767123778211110Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, ISlxx23e-21101
NC_006087:1334500:1352017135201713531261110Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, ISlxx23e-21101
NC_006087:1425682:1428633142863314297421110Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, ISlxx23e-21101
NC_020908:823589:8255848255848266271044Octadecabacter arcticus 238, complete genomeputative IS110 family transposase4e-21100
NC_016800:1411000:1412065141206514132941230Corynebacterium diphtheriae BH8 chromosome, complete genometransposase-like protein1e-2099.8
NC_016789:224697:2263192263192275481230Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein1e-2099.8
NC_016789:199503:2263192263192275481230Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein1e-2099.8
NC_016789:1495274:1508541150854115097701230Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein1e-2099.8
NC_020911:1776670:1781941178194117829931053Octadecabacter antarcticus 307, complete genomeputative IS110-family transposase1e-2099.8
NC_003155:777216:7882487882487893121065Streptomyces avermitilis MA-4680, complete genomeIS110 family transposase3e-2097.8
NC_004369:1552847:1563201156320115644301230Corynebacterium efficiens YS-314, complete genomeputative transposase5e-2097.4
NC_004369:531579:548858548858549592735Corynebacterium efficiens YS-314, complete genomehypothetical protein7e-2097.1
NC_020911:2998000:3002336300233630033881053Octadecabacter antarcticus 307, complete genomeputative IS110-family transposase8e-2096.7
NC_016906:2845424:2857737285773728588521116Gordonia polyisoprenivorans VH2 chromosome, complete genometransposase1e-1892.8
NC_016109:4455158:446982844698284470253426Kitasatospora setae KM-6054, complete genomehypothetical protein1e-1892.8
NC_004369:1268956:1295135129513512963971263Corynebacterium efficiens YS-314, complete genomeputative transposase6e-1890.5
NC_004369:1268956:1287053128705312883151263Corynebacterium efficiens YS-314, complete genomeinsertion element conserved hypothetical protein6e-1890.5
NC_004369:531579:5473975473975486351239Corynebacterium efficiens YS-314, complete genomeputative transposase6e-1890.5
NC_004369:256262:2696762696762709141239Corynebacterium efficiens YS-314, complete genomeputative transposase6e-1890.5
NC_014158:233733:2759272759272770901164Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase IS3/IS911 family protein1e-1789.4
NC_009953:3385428:338859233885923389575984Salinispora arenicola CNS-205 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-1685.9
NC_009921:5531972:5548222554822255493341113Frankia sp. EAN1pec, complete genometransposase IS116/IS110/IS902 family protein7e-1580.1
NC_013929:1584906:1594672159467215957421071Streptomyces scabiei 87.22 chromosome, complete genometransposase3e-1271.2
NC_014815:3790050:3804410380441038054891080Micromonospora sp. L5 chromosome, complete genometransposase is116/is110/is902 family protein2e-1168.9
NC_003888:7028165:7059104705910470602431140Streptomyces coelicolor A3(2), complete genometransposase2e-1168.9
NC_017219:1203500:1211335121133512126001266Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transposase7e-1063.5
NC_011593:1202726:1211544121154412128091266Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,transposase IS116/IS110/IS902 family protein7e-1063.5
NC_017219:2292040:2316921231692123181861266Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transposase7e-0960.5
NC_011593:2288993:2317103231710323183681266Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,transposase IS116/IS110/IS902 family protein7e-0960.5
NC_017955:343931:3439313439313449891059Modestobacter marinus, complete genometransposase IS116/IS110/IS902 family6e-0650.4
NC_017955:2494640:2518771251877125198291059Modestobacter marinus, complete genometransposase6e-0650.4