Pre_GI: BLASTP Hits

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Query: NC_007951:570500:604115 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 604115, End: 604717, Length: 603

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:6259649:6269804626980462711471344Methylobacterium nodulans ORS 2060, complete genomenatural resistance-associated macrophage protein6e-50196
NC_009485:7626677:7643071764307176443781308Bradyrhizobium sp. BTAi1 chromosome, complete genomemanganese transport protein1e-48192
NC_007953:572926:5729265729265742151290Burkholderia xenovorans LB400 chromosome 3, complete sequenceMn2+/Fe2+ transporter, NRAMP family5e-43173
NC_017249:3181976:3200135320013532014991365Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein9e-38156
NC_010508:1865602:1880259188025918815451287Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencenatural resistance-associated macrophage protein2e-33142
NC_011983:508287:5082875082875096031317Agrobacterium radiobacter K84 chromosome 2, complete genomemanganese transport protein3e-27121
NC_009441:3597020:3607615360761536088771263Flavobacterium johnsoniae UW101 chromosome, complete genomenatural resistance-associated macrophage protein5e-1994
NC_014328:1739578:1739578173957817408311254Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative divalent cation transporter1e-1170.1
NC_011146:3720658:3729560372956037307861227Geobacter bemidjiensis Bem, complete genomenatural resistance-associated macrophage protein6e-1063.9
NC_013204:74855:1010231010231023391317Eggerthella lenta DSM 2243, complete genomenatural resistance-associated macrophage protein8e-1063.5
NC_010511:4313769:432839043283904328545156Methylobacterium sp. 4-46 chromosome, complete genome1e-0963.2
NC_009138:1544835:156588515658851566106222Herminiimonas arsenicoxydans, complete genomehypothetical protein4e-0961.2
NC_017191:425000:4357124357124369861275Bacillus amyloliquefaciens XH7 chromosome, complete genomemanganese transport protein MntH1e-0859.3
NC_017190:424000:4344754344754357491275Bacillus amyloliquefaciens LL3 chromosome, complete genomemanganese transporter1e-0859.3
NC_017188:419000:4298024298024310761275Bacillus amyloliquefaciens TA208 chromosome, complete genomemanganese transport protein MntH1e-0859.3
NC_014551:442135:4524464524464537201275Bacillus amyloliquefaciens DSM 7, complete genomemanganese transporter1e-0859.3
NC_020291:1871846:1890352189035218915931242Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeMn2+ and Fe2+ transporters of the NRAMP family2e-0858.9
NC_002932:937157:9536779536779549361260Chlorobium tepidum TLS, complete genomenatural resistance-associated macrophage protein family protein4e-0857.8
NC_017904:4742775:4754341475434147560081668Mycobacterium sp. MOTT36Y chromosome, complete genomeMn2+/Fe2+ transporter7e-0857
NC_009712:1446472:1469874146987414711421269Candidatus Methanoregula boonei 6A8, complete genomenatural resistance-associated macrophage protein2e-0755.8
NC_007712:2806500:285460828546082855258651Sodalis glossinidius str. 'morsitans', complete genomeputative manganese transport protein MntH3e-0755.1
NC_014532:2989185:3007981300798130092731293Halomonas elongata DSM 2581, complete genomeK03322 metal ion transporter, Nramp family8e-0753.9
NC_009485:1604942:1640812164081216421311320Bradyrhizobium sp. BTAi1 chromosome, complete genomemanganese/divalent cation transport protein7e-0753.9
NC_012912:3749156:3749156374915637503911236Dickeya zeae Ech1591, complete genomeMn2+/Fe2+ transporter, NRAMP family9e-0753.5
NC_012880:3748665:3767627376762737688651239Dickeya dadantii Ech703, complete genomeMn2+/Fe2+ transporter, NRAMP family1e-0653.5
NC_009485:7827782:7831083783108378327111629Bradyrhizobium sp. BTAi1 chromosome, complete genomemanganese transport transmembrane protein1e-0653.1
NC_004193:783958:7847417847417859941254Oceanobacillus iheyensis HTE831, complete genomehypothetical protein1e-0653.1
NC_012917:833721:8515298515298527671239Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMn2+/Fe2+ transporter, NRAMP family1e-0653.1
NC_013421:1038500:1038569103856910398071239Pectobacterium wasabiae WPP163, complete genomeMn2+/Fe2+ transporter, NRAMP family1e-0653.1
NC_004547:913553:9332339332339344651233Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative manganese transport protein MntH1e-0652.8
NC_016602:1994110:1999300199930020005441245Vibrio furnissii NCTC 11218 chromosome 1, complete sequencemanganese transport protein1e-0652.8
NC_015944:10500:3454134541357491209Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequenceputative Mn transporter2e-0652.4
NC_009485:1604942:1637667163766716393011635Bradyrhizobium sp. BTAi1 chromosome, complete genomemanganese transport protein2e-0652