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Query: NC_007951:570500:598762 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 598762, End: 600561, Length: 1800

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008391:865340:8653408653408671271788Burkholderia cepacia AMMD chromosome 2, complete sequenceCl- channel, voltage-gated family protein0635
NC_011894:2184956:2198418219841822002291812Methylobacterium nodulans ORS 2060, complete genomeChloride channel core1e-92341
NC_020126:7372685:7375319737531973771931875Myxococcus stipitatus DSM 14675, complete genomechloride channel6e-73275
NC_007509:3668:5458654586558481263Burkholderia sp. 383 chromosome 3, complete sequenceCl- channel, voltage gated7e-1789.4
NC_015320:1399589:1417496141749614192651770Archaeoglobus veneficus SNP6 chromosome, complete genomeCl- channel voltage-gated family protein1e-1482
NC_011126:555483:5620315620315634581428Hydrogenobaculum sp. Y04AAS1, complete genomeChloride channel core4e-1480.1
NC_017080:1194199:1194199119419911959471749Phycisphaera mikurensis NBRC 102666, complete genomeputative ClC chloride channel2e-1171.6
NC_011027:817311:8350488350488369371890Chlorobaculum parvum NCIB 8327, complete genomeChloride channel core3e-1067.4
NC_012483:483425:5090275090275107451719Acidobacterium capsulatum ATCC 51196, complete genomechloride transporter, ClC family3e-1067.4
NC_008340:480399:4803994803994821261728Alkalilimnicola ehrlichei MLHE-1, complete genomeCl- channel, voltage-gated family protein3e-1067.4
NC_002689:78297:9714297142989201779Thermoplasma volcanium GSS1, complete genomeChloride channel protein3e-1067.4
NC_013166:417862:4182924182924200671776Kangiella koreensis DSM 16069, complete genomeChloride channel core3e-1067.4
NC_013205:1123280:1155829115582911575831755Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Cl- channel voltage-gated family protein5e-0963.5
NC_014761:1196669:1215782121578212175481767Oceanithermus profundus DSM 14977 chromosome, complete genomecl- channel voltage-gated family protein1e-0862
NC_007514:1840971:1863568186356818654631896Chlorobium chlorochromatii CaD3, complete genomechloride channel, putative2e-0758.2
NC_020541:2487427:2487427248742724888151389Rhodanobacter sp. 2APBS1, complete genomechloride channel protein EriC6e-0756.6
NC_014532:2298628:2300945230094523027231779Halomonas elongata DSM 2581, complete genomeK03281 chloride channel protein, CIC family5e-0653.5
NC_011206:2685499:2715535271553527169591425Acidithiobacillus ferrooxidans ATCC 53993, complete genomeChloride channel core5e-0653.1
NC_011761:2785660:2815696281569628170991404Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completevoltage-gated chloride channel7e-0652.8
NC_004663:5099845:5119138511913851209341797Bacteroides thetaiotaomicron VPI-5482, complete genomeputative chloride channel protein7e-0652.8
NC_014640:6971000:6989479698947969908461368Achromobacter xylosoxidans A8 chromosome, complete genomevoltage gated chloride channel family protein 39e-0652.4