Pre_GI: BLASTP Hits

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Query: NC_007951:570500:596249 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 596249, End: 596920, Length: 672

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010084:2822295:285498728549872855670684Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein2e-83308
NC_007510:759905:762064762064762747684Burkholderia sp. 383 chromosome 1, complete sequenceputative DedA family transmembrane protein6e-83306
NC_006350:3329477:336403333640333364776744Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative DedA family transmembrane protein8e-83306
NC_009076:3179662:321421732142173214897681Burkholderia pseudomallei 1106a chromosome I, complete sequencemembrane protein, DedA family1e-82306
NC_011000:3514338:356207135620713562754684Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative DedA family protein1e-82305
NC_007434:3588081:362263736226373623488852Burkholderia pseudomallei 1710b chromosome I, complete sequenceDedA1e-82305
NC_009074:3163362:319791931979193198647729Burkholderia pseudomallei 668 chromosome I, complete sequencemembrane protein, DedA family2e-82305
NC_008060:306170:309276309276310010735Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceputative DedA family transmembrane protein3e-82304
NC_008542:855347:858453858453859187735Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceputative DedA family transmembrane protein3e-82304
NC_009080:2123987:215854221585422159222681Burkholderia mallei NCTC 10247 chromosome II, complete sequencemembrane protein, DedA family3e-82304
NC_006348:2372945:240750024075002408180681Burkholderia mallei ATCC 23344 chromosome 1, complete sequencededA family protein3e-82304
NC_008836:1072721:110727611072761107956681Burkholderia mallei NCTC 10229 chromosome II, complete sequencededA family protein3e-82304
NC_010508:809974:812109812109812843735Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceSNARE associated Golgi protein1e-81302
NC_015381:766355:768624768624769307684Burkholderia gladioli BSR3 chromosome 1, complete sequencePutative DedA family transmembrane protein6e-76283
NC_012779:2586175:261256926125692613234666Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-48192
NC_015224:3225000:324891932489193249581663Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein3e-48191
NC_017986:3283433:329825032982503298906657Pseudomonas putida ND6 chromosome, complete genomehypothetical protein9e-46183
NC_004129:6240904:624896162489616249617657Pseudomonas fluorescens Pf-5, complete genomeDedA family protein1e-45182
NC_016830:5994494:599964159996416000297657Pseudomonas fluorescens F113 chromosome, complete genomeDedA integral membrane protein6e-45180
NC_015379:6023926:602922760292276029883657Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,membrane-related protein DedA7e-45180
NC_014960:3410741:342930734293073429975669Anaerolinea thermophila UNI-1, complete genomehypothetical protein3e-44178
NC_012438:1564794:158257915825791583187609Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomemembrane protein, DedA family5e-42171
NC_015277:2096266:210243021024302103092663Sphingobacterium sp. 21 chromosome, complete genomeSNARE associated Golgi protein-related protein1e-41169
NC_017513:997716:101460010146001015244645Neisseria meningitidis G2136 chromosome, complete genomemembrane protein, dedA family1e-41169
NC_009617:4836000:485275648527564853409654Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein1e-40166
NC_010611:154307:175655175655176296642Acinetobacter baumannii ACICU, complete genomeuncharacterized membrane-associated protein5e-40164
NC_010611:3879190:390354939035493904106558Acinetobacter baumannii ACICU, complete genomeuncharacterized membrane-associated protein1e-37155
NC_005362:550823:555960555960556610651Lactobacillus johnsonii NCC 533, complete genomeDedA7e-36150
NC_013504:447891:453028453028453678651Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein7e-36150
NC_008530:469802:474948474948475598651Lactobacillus gasseri ATCC 33323, complete genomeUncharacterized membrane-associated protein7e-36150
NC_014724:439594:447961447961448611651Lactobacillus amylovorus GRL 1112 chromosome, complete genomemembrane-associated protein5e-35147
NC_015602:117939:123120123120123770651Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeDedA family protein3e-34145
NC_014106:419511:425726425726426376651Lactobacillus crispatus ST1, complete genomeDedA protein2e-34145
NC_013730:834500:861081861081861722642Spirosoma linguale DSM 74, complete genomeSNARE associated Golgi protein-like protein2e-34145
NC_015214:437733:445233445233445883651Lactobacillus acidophilus 30SC chromosome, complete genomemembrane-associated protein2e-34145
NC_015555:211935:228934228934229563630Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeSNARE associated Golgi protein-like protein5e-34144
NC_015738:873653:885612885612886307696Eggerthella sp. YY7918, complete genomemembrane-associated protein1e-33142
NC_010080:445398:448794448794449444651Lactobacillus helveticus DPC 4571, complete genomeputative membrane protein2e-33142
NC_007576:435713:441787441787442502716Lactobacillus sakei subsp. sakei 23K, complete genomeHypothetical membrane protein2e-33142
NC_018528:446610:452887452887453537651Lactobacillus helveticus R0052 chromosome, complete genomemembrane-associated protein5e-33140
NC_016605:766836:772561772561773202642Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeprotein dedA3e-32138
NC_015975:1493636:151185415118541512510657Lactobacillus ruminis ATCC 27782 chromosome, complete genomededA family protein3e-32138
NC_013199:811929:813399813399814052654Lactobacillus rhamnosus Lc 705, complete genomeintegral membrane protein, DedA family4e-32137
NC_013198:813830:818849818849819502654Lactobacillus rhamnosus GG, complete genomeDedA family protein (integral membrane protein)4e-32137
NC_008525:1202852:121631512163151216959645Pediococcus pentosaceus ATCC 25745, complete genomeUncharacterized membrane-associated protein5e-32137
NC_014334:769205:771351771351772004654Lactobacillus casei str. Zhang chromosome, complete genomemembrane-associated protein1e-31136
NC_007929:473500:477779477779478420642Lactobacillus salivarius subsp. salivarius UCC118, complete genomeDedA family protein3e-31135
NC_010999:880878:882371882371883024654Lactobacillus casei, complete genomehypothetical protein3e-31135
NC_008526:817628:819774819774820427654Lactobacillus casei ATCC 334, complete genomeUncharacterized membrane-associated protein9e-31133
NC_015697:1814128:182011018201101820757648Lactobacillus reuteri SD2112 chromosome, complete genomeDedA family membrane protein4e-30131
NC_009513:618000:623082623082623729648Lactobacillus reuteri F275, complete genomeSNARE associated Golgi protein9e-30130
NC_014727:1537183:155254415525441553203660Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,hypothetical protein2e-28125
NC_002677:363432:368449368449369117669Mycobacterium leprae TN, complete genomehypothetical protein2e-28125
NC_011896:363448:368465368465369133669Mycobacterium leprae Br4923, complete genomehypothetical protein2e-28125
NC_005125:637333:653917653917654552636Gloeobacter violaceus PCC 7421, complete genomehypothetical protein1e-27122
NC_009085:131000:152429152429152947519Acinetobacter baumannii ATCC 17978, complete genomeputative integral membrane protein (DedA)3e-26118
NC_015428:823420:827935827935828579645Lactobacillus buchneri NRRL B-30929 chromosome, complete genomehypothetical protein2e-24112
NC_014363:1973670:198513119851311985799669Olsenella uli DSM 7084 chromosome, complete genomeSNARE associated Golgi protein-like protein1e-23110
NC_011527:1443076:144400514440051444613609Coxiella burnetii CbuG_Q212, complete genomeDedA family protein2e-23109
NC_011528:1282691:128362012836201284228609Coxiella burnetii CbuK_Q154, complete genomeDedA family protein2e-23109
NC_009727:1542000:154486915448691545477609Coxiella burnetii Dugway 7E9-12, complete genomeDedA family protein2e-23109
NC_008699:1673181:1694650169465016960261377Nocardioides sp. JS614, complete genomephosphoesterase, PA-phosphatase related1e-23109
NC_013714:2477638:248181424818142482491678Bifidobacterium dentium Bd1, complete genomeDedA family protein2e-23108
NC_003888:7561923:758963275896327590327696Streptomyces coelicolor A3(2), complete genomeintegral membrane protein2e-22105
NC_013716:5020204:504038750403875041049663Citrobacter rodentium ICC168, complete genomehypothetical protein3e-22105
NC_009778:3454790:345479034547903455452663Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-22104
NC_020260:3457597:345759734575973458259663Cronobacter sakazakii Sp291, complete genomeinner membrane protein YqjA4e-22104
NC_015703:3325780:332804633280463328684639Runella slithyformis DSM 19594 chromosome, complete genomehypothetical protein2e-21102
NC_013715:193647:198435198435199121687Rothia mucilaginosa DY-18, complete genomeuncharacterized membrane-associated protein1e-20100
NC_014218:1163513:116949911694991170158660Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeSNARE associated Golgi protein-like protein1e-1996.7
NC_010545:404111:418741418741419379639Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein9e-1993.6
NC_007164:2046937:206477320647732065411639Corynebacterium jeikeium K411, complete genomehypothetical protein4e-1891.3
NC_012704:376783:391940391940392896957Corynebacterium kroppenstedtii DSM 44385, complete genomehypothetical protein7e-1890.9
NC_003888:7028165:704205470420547042737684Streptomyces coelicolor A3(2), complete genomehypothetical protein4e-1788.2
NC_015957:7249873:725127272512727251955684Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein4e-1684.7
NC_008149:650706:651691651691652353663Yersinia pestis Nepal516, complete genomeDedA-family membrane protein5e-1684.3
NC_010465:733916:733916733916734578663Yersinia pseudotuberculosis YPIII, complete genomeSNARE associated Golgi protein5e-1684.3
NC_005810:3333000:333409633340963334758663Yersinia pestis biovar Microtus str. 91001, complete genomeDedA family membrane protein5e-1684.3
NC_004088:3859173:387971638797163880378663Yersinia pestis KIM, complete genomehypothetical protein5e-1684.3
NC_010634:3905369:392995439299543930616663Yersinia pseudotuberculosis PB1/+, complete genomeSNARE associated Golgi protein5e-1684.3
NC_003143:741169:742154742154742816663Yersinia pestis CO92, complete genomeputative DedA-family membrane protein5e-1684.3
NC_006155:3992818:401849740184974019159663Yersinia pseudotuberculosis IP 32953, complete genomeputative DedA-family membrane protein.5e-1684.3
NC_010159:259695:280232280232280894663Yersinia pestis Angola, complete genomehypothetical protein5e-1684.3
NC_009381:522731:523716523716524378663Yersinia pestis Pestoides F chromosome, complete genomeDedA family membrane protein5e-1684.3
NC_009708:692508:693493693493694155663Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-1684.3
NC_014029:792719:793704793704794366663Yersinia pestis Z176003 chromosome, complete genomeputative DedA-family membrane protein5e-1684.3
NC_017154:734875:735860735860736522663Yersinia pestis D106004 chromosome, complete genomeputative DedA-family membrane protein5e-1684.3
NC_017160:737000:738039738039738701663Yersinia pestis D182038 chromosome, complete genomeputative DedA-family membrane protein5e-1684.3
NC_017168:341233:362486362486363148663Yersinia pestis A1122 chromosome, complete genomeputative DedA-family membrane protein5e-1684.3
NC_017265:3724500:374507637450763745738663Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-1684.3
NC_013131:9711508:971580597158059716539735Catenulispora acidiphila DSM 44928, complete genomeSNARE associated Golgi protein3e-1581.6
NC_015224:3820338:385418138541813854843663Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,DedA family membrane protein5e-1581.3
NC_008800:3955284:397592039759203976582663Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,DedA family membrane protein5e-1581.3
NC_009664:4423829:453490445349044535560657Kineococcus radiotolerans SRS30216, complete genomeSNARE associated Golgi protein6e-1580.9
NC_015580:1745918:174999117499911750587597Novosphingobium sp. PP1Y, complete genomeDedA family protein5e-1477.8
NC_008150:3430000:345059834505983451149552Yersinia pestis Antiqua, complete genomeputative DedA-family membrane protein6e-1374.3
NC_016582:11380000:113982671139826711398932666Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein9e-1373.6
NC_010170:1661915:167723316772331677904672Bordetella petrii, complete genomehypothetical protein9e-1373.6
NC_015064:2871152:2883981288398128849971017Acidobacterium sp. MP5ACTX9 chromosome, complete genomeRhodanese domain protein1e-1273.2
NC_008537:130278:149853149853150521669Arthrobacter sp. FB24 plasmid 1, complete sequenceUncharacterized membrane-associated protein-like protein2e-1272.8
NC_014328:180482:191420191420192028609Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein2e-1169.3
NC_011369:1135592:1182044118204411840742031Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completePA-phosphatase-like phosphoesterase3e-1168.6
NC_021182:1654903:165752016575201658143624Clostridium pasteurianum BC1, complete genomeputative membrane-associated protein7e-1167.4
NC_013939:1625491:162660316266031627205603Deferribacter desulfuricans SSM1, complete genomehypothetical protein2e-1066.2
NC_015161:354000:369070369070369678609Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein2e-1066.2
NC_015850:110364:127215127215127754540Acidithiobacillus caldus SM-1 chromosome, complete genomededA protein3e-1065.5
NC_014551:483773:5041205041205054001281Bacillus amyloliquefaciens DSM 7, complete genomeSNARE associated Golgi protein [Paenibacillus sp. JDR-2] gi|169185893|6e-1064.3
NC_017188:461177:4915974915974928771281Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein6e-1064.3
NC_017190:466236:4900604900604913401281Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein6e-1064.3
NC_017191:467207:4976194976194988991281Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein6e-1064.3
NC_008254:611437:615447615447616145699Mesorhizobium sp. BNC1, complete genomeDedA family protein5e-1064.3
NC_012726:2338500:233955823395582340142585Sulfolobus islandicus M.16.4 chromosome, complete genomehypothetical protein9e-1063.5
NC_012623:160224:169652169652170236585Sulfolobus islandicus Y.N.15.51 chromosome, complete genomehypothetical protein1e-0963.5
NC_017276:2240069:224847222484722249056585Sulfolobus islandicus REY15A chromosome, complete genomehypothetical protein1e-0963.2
NC_012632:2415739:244204424420442442628585Sulfolobus islandicus M.16.27 chromosome, complete genomehypothetical protein1e-0963.2
NC_014650:3589604:359075635907563591352597Geobacillus sp. Y4.1MC1 chromosome, complete genomehypothetical protein2e-0963.2
NC_015660:3643370:364576736457673646363597Geobacillus thermoglucosidasius C56-YS93 chromosome, completehypothetical protein2e-0963.2
NC_007622:2501562:252278325227832523394612Staphylococcus aureus RF122, complete genomeprobable alkaline phosphatase5e-0961.2
NC_002952:2653482:267462426746242675235612Staphylococcus aureus subsp. aureus MRSA252, complete genomeDedA family protein5e-0961.2
NC_016593:596500:601445601445602050606Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completealkaline phosphatase1e-0860.1
NC_006510:591339:596255596255596860606Geobacillus kaustophilus HTA426, complete genomealkaline phosphatase1e-0860.1
NC_012912:647369:659976659976660743768Dickeya zeae Ech1591, complete genomeSNARE associated Golgi protein1e-0860.1
NC_014958:514225:529880529880530539660Deinococcus maricopensis DSM 21211 chromosome, complete genomeSNARE associated Golgi protein-like protein1e-0860.1
NC_015722:209722:230914230914231525612Candidatus Midichloria mitochondrii IricVA chromosome, completehypothetical protein2e-0859.3
NC_015850:1850741:185664218566421857049408Acidithiobacillus caldus SM-1 chromosome, complete genomeDedA family protein2e-0859.3
NC_014820:877724:878130878130878741612Cenarchaeum symbiosum A, complete genomeuncharacterized membrane-associated protein2e-0859.3
NC_002939:1601706:161594916159491616563615Geobacter sulfurreducens PCA, complete genomeDedA family protein2e-0858.9
NC_021184:1257722:127761912776191278233615Desulfotomaculum gibsoniae DSM 7213, complete genomeputative membrane-associated protein4e-0858.5
NC_013174:309943:313105313105313824720Jonesia denitrificans DSM 20603, complete genomeSNARE associated Golgi protein4e-0858.5
NC_007517:1515493:153136515313651532003639Geobacter metallireducens GS-15, complete genomeDedA4e-0858.2
NC_009667:1934818:194775019477501948412663Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceSNARE associated Golgi protein6e-0857.8
NC_016776:3258939:327227232722723272913642Bacteroides fragilis 638R, complete genomehypothetical protein7e-0857.4
NC_003228:3212500:323486532348653235506642Bacteroides fragilis NCTC 9343, complete genomehypothetical protein7e-0857.4
NC_006347:3166000:317349431734943174135642Bacteroides fragilis YCH46, complete genomeputative alkaline phosphatase7e-0857.4
NC_005957:4850659:485289748528974853496600Bacillus thuringiensis serovar konkukian str. 97-27, completeconserved hypothetical protein, possible transmembrane protein1e-0757
NC_007958:2370619:239326723932672393875609Rhodopseudomonas palustris BisB5, complete genomeDedA family protein9e-0857
NC_009091:1514770:153716415371641537823660Prochlorococcus marinus str. MIT 9301, complete genomeDedA family; putative alkaline phosphatase-like protein9e-0857
NC_010172:57500:110845110845111471627Methylobacterium extorquens PA1, complete genomeSNARE associated Golgi protein1e-0756.6
NC_009614:4844000:485776148577614858387627Bacteroides vulgatus ATCC 8482 chromosome, complete genomealkaline phosphatase1e-0756.6
NC_011004:2457778:248091424809142481522609Rhodopseudomonas palustris TIE-1, complete genomeSNARE associated Golgi protein2e-0756.2
NC_008609:251608:278930278930279538609Pelobacter propionicus DSM 2379, complete genomeDedA family protein2e-0755.8
NC_021171:2697398:269739826973982698003606Bacillus sp. 1NLA3E, complete genomehypothetical protein2e-0755.5
NC_014210:723719:742315742315743010696Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,SNARE associated Golgi protein-related protein5e-0754.7
NC_015387:155728:168501168501168992492Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeSNARE associated Golgi protein-like protein1e-0653.5
NC_008817:1574506:159693515969351597594660Prochlorococcus marinus str. MIT 9515, complete genomeDedA family; putative alkaline phosphatase-like protein2e-0652.8
NC_003106:2496232:250151625015162502091576Sulfolobus tokodaii str. 7, complete genomehypothetical protein3e-0652.4
NC_008261:1048515:105004310500431050669627Clostridium perfringens ATCC 13124, complete genomeDedA family protein5e-0651.2
NC_009482:87193:105034105034105693660Synechococcus sp. RCC307 chromosome, complete genomehypothetical protein5e-0651.2
NC_013520:1936209:194679919467991947386588Veillonella parvula DSM 2008, complete genomeSNARE associated Golgi protein-related protein7e-0650.8
NC_014639:3850000:387491538749153875403489Bacillus atrophaeus 1942 chromosome, complete genomemembrane phosphatase8e-0650.4
CP002207:3850000:387491538749153875403489Bacillus atrophaeus 1942, complete genomeputative membrane phosphatase8e-0650.4