Pre_GI: BLASTP Hits

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Query: NC_007951:570500:589351 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 589351, End: 590610, Length: 1260

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012968:239476:2534022534022547571356Methylotenera mobilis JLW8, complete genomeRelaxase/mobilization nuclease family protein1e-43177
NC_010682:460523:4853644853644867371374Ralstonia pickettii 12J chromosome 1, complete sequenceRelaxase/mobilization nuclease family protein1e-40167
NC_009659:2849000:2859454285945428607281275Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein3e-29129
NC_009256:2945059:2977343297734329786651323Burkholderia vietnamiensis G4 chromosome 1, complete sequencerelaxase/mobilization nuclease family protein1e-26120
NC_014910:3727887:3742693374269337441111419Alicycliphilus denitrificans BC chromosome, complete genomerelaxase/mobilization nuclease family protein6e-26119
NC_012856:798922:8088538088538103431491Ralstonia pickettii 12D chromosome 1, complete genomeRelaxase/mobilization nuclease family protein2e-25117
NC_015674:66000:7575075750770931344Helicobacter bizzozeronii CIII-1, complete genomeprotein C3e-1480.1
NC_014965:2200974:2209941220994122117521812Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein5e-1169.3