Pre_GI: BLASTP Hits

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Query: NC_007951:570500:577235 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 577235, End: 578653, Length: 1419

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015422:3366500:3376628337662833779141287Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein2e-35150
NC_011000:1023800:1035090103509010364601371Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative phage-related integrase1e-33144
NC_010084:695817:7080887080887094581371Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein1e-33144
NC_009256:3056000:3062577306257730639471371Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage integrase family protein1e-33144
NC_010804:2808676:2815315281531528166851371Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase / tyrosine recombinase1e-33144
NC_009076:779407:7927997927997941571359Burkholderia pseudomallei 1106a chromosome I, complete sequencesite-specific recombinase, phage integrase family3e-32140
NC_006350:845513:8574748574748588321359Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative phage-related integrase3e-32140
NC_010682:460523:4937344937344950531320Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein7e-30132
NC_015381:3789661:3796625379662537982231599Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative phage-related integrase3e-27123
NC_012968:239476:2397482397482412021455Methylotenera mobilis JLW8, complete genomehypothetical protein2e-26120
NC_014117:132524:1345211345211360951575Burkholderia sp. CCGE1002 chromosome chromosome 1, completehypothetical protein3e-26120
NC_015740:2614317:263366526336652634567903Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein3e-25116
NC_007508:1221500:1255730125573012572471518Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative integrase4e-24113
NC_007434:1001514:1016158101615810173961239Burkholderia pseudomallei 1710b chromosome I, complete sequenceputative phage-related integrase6e-24112
NC_011146:3426500:3474592347459234759021311Geobacter bemidjiensis Bem, complete genomeintegrase family protein3e-23110
NC_016010:1169850:1185584118558411871041521Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeIntegrase XerC7e-23108
NC_007643:791500:7959047959047970641161Rhodospirillum rubrum ATCC 11170, complete genomePhage integrase7e-23108
NC_011146:1998981:2013194201319420144981305Geobacter bemidjiensis Bem, complete genomeintegrase family protein9e-23108
NC_003902:1858349:1865420186542018668141395Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related integrase1e-22108
NC_010524:1005355:1017147101714710183131167Leptothrix cholodnii SP-6, complete genomeintegrase family protein8e-22105
NC_009256:2509806:2517264251726425185321269Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage integrase domain/SAM domain-containing protein8e-22105
NC_014973:1941500:1955814195581419571001287Geobacter sp. M18 chromosome, complete genomeintegrase family protein3e-21103
NC_012796:2683711:2690065269006526917561692Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase2e-20101
NC_012918:1697860:1704183170418317054751293Geobacter sp. M21 chromosome, complete genomeintegrase family protein1e-20101
NC_014355:139324:1433791433791448211443Candidatus Nitrospira defluvii, complete genomeputative integrase3e-20100
NC_008027:1847040:1862344186234418636361293Pseudomonas entomophila L48, complete genomeintegrase5e-2099.4
NC_011662:1160887:1170392117039211715971206Thauera sp. MZ1T, complete genomehypothetical protein5e-2099.4
NC_007643:3799425:3824154382415438258541701Rhodospirillum rubrum ATCC 11170, complete genomePhage integrase7e-2099
NC_008782:1863853:1871054187105418726701617Acidovorax sp. JS42, complete genomephage integrase family protein1e-1998.6
NC_010501:3987615:3992949399294939942741326Pseudomonas putida W619, complete genomeintegrase family protein2e-1997.4
NC_007946:289425:2952282952282971681941Escherichia coli UTI89, complete genomeputative integrase4e-1996.3
NC_013421:3752619:3762474376247437644141941Pectobacterium wasabiae WPP163, complete genomeintegrase family protein4e-1996.3
NC_014973:3452100:3471071347107134723601290Geobacter sp. M18 chromosome, complete genomeintegrase family protein6e-1995.9
NC_016010:1822212:1827666182766618291471482Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeintegrase2e-1894
NC_002939:1866651:1874575187457518762451671Geobacter sulfurreducens PCA, complete genomeintegrative genetic element Gsu5, integrase3e-1893.6
NC_012808:58701:6196261962637671806Methylobacterium extorquens AM1, complete genomehypothetical protein3e-1893.6
NC_009800:4529504:4532707453270745346561950Escherichia coli HS, complete genomesite-specific recombinase, phage integrase family1e-1791.7
NC_020409:584000:5846785846785863511674Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Phage integrase1e-1791.7
NC_014541:1231021:1236294123629412375351242Ferrimonas balearica DSM 9799 chromosome, complete genomeintegrase family protein1e-1791.3
NC_010511:7024412:7031164703116470326931530Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein1e-1791.3
NC_009952:2217877:2223872222387222254611590Dinoroseobacter shibae DFL 12, complete genomeputative integrase2e-1790.9
NC_004603:2235142:2240007224000722413441338Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein2e-1790.5
NC_016010:1822212:1855472185547218566231152Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeintegrase4e-1789.7
NC_011000:3362382:3368967336896733707271761Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative integrase1e-1688.6
NC_016803:593484:5983485983486000871740Desulfovibrio desulfuricans ND132 chromosome, complete genomeintegrase family protein8e-1788.6
NC_007508:1221500:1227118122711812285991482Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative integrase1e-1688.2
NC_010688:1192410:1196622119662211981871566Xanthomonas campestris pv. campestris, complete genomephage-related integrase2e-1687.4
NC_010688:3229820:3237928323792832394601533Xanthomonas campestris pv. campestris, complete genomephage-related integrase4e-1686.7
NC_012796:2041579:2048611204861120503621752Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase4e-1686.7
NC_015410:2258800:2276000227600022773761377Pseudomonas mendocina NK-01 chromosome, complete genomeintegrase family protein4e-1686.7
NC_015733:4130000:4140692414069241419091218Pseudomonas putida S16 chromosome, complete genomeintegrase family protein6e-1685.9
NC_003919:1716831:1744033174403317455651533Xanthomonas axonopodis pv. citri str. 306, complete genomephage-related integrase9e-1685.5
NC_013456:2528284:2536921253692125386211701Vibrio sp. Ex25 chromosome 1, complete genomeintegrase8e-1685.5
NC_014844:2828370:2841263284126328429511689Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein1e-1584.7
NC_003911:1265972:1277271127727112788601590Silicibacter pomeroyi DSS-3, complete genomesite-specific recombinase, phage integrase family2e-1584
NC_010725:356609:3691903691903708721683Methylobacterium populi BJ001, complete genomeintegrase family protein2e-1584
NC_007519:1782067:1787842178784217896921851Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein3e-1583.6
NC_010084:2674972:2682560268256026845151956Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein3e-1583.6
NC_010804:831000:8402588402588422131956Burkholderia multivorans ATCC 17616 chromosome 1, completetyrosine recombinase3e-1583.6
NC_009348:2034500:2041208204120820424731266Aeromonas salmonicida subsp. salmonicida A449, complete genomephage integrase family site specific recombinase4e-1583.2
NC_013854:1686997:1697457169745716991721716Azospirillum sp. B510, complete genomephage integrase family protein5e-1582.8
NC_009439:4661102:4664986466498646666801695Pseudomonas mendocina ymp, complete genomehypothetical protein6e-1582.4
NC_016585:116143:1196871196871216841998Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencehypothetical protein7e-1582.4
NC_008609:1394377:1408298140829814094431146Pelobacter propionicus DSM 2379, complete genomehypothetical protein1e-1481.3
NC_015567:1127780:1135692113569211367711080Serratia sp. AS9 chromosome, complete genomeintegrase family protein2e-1480.9
NC_015566:1127595:1135507113550711365861080Serratia sp. AS12 chromosome, complete genomeintegrase family protein2e-1480.9
NC_014307:1619000:1623749162374916253741626Ralstonia solanacearum CFBP2957 chromosome, complete genomephage integrase2e-1480.5
NC_011283:4438500:4450876445087644520841209Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase3e-1480.1
NC_010511:1641416:1641416164141616429631548Methylobacterium sp. 4-46 chromosome, complete genomeintegrase domain-containing protein5e-1479.7
NC_014117:132524:1736441736441747381095Burkholderia sp. CCGE1002 chromosome chromosome 1, completeintegrase family protein5e-1479.3
NC_013855:56344:6317763177653152139Azospirillum sp. B510 plasmid pAB510a, complete sequenceintegrase2e-1377.8
NC_010688:3515885:3552388355238835537821395Xanthomonas campestris pv. campestris, complete genomephage-related integrase2e-1377.4
NC_007508:3865000:3899877389987739010221146Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative phage-related integrase2e-1377.4
NC_003902:1858349:1882328188232818837761449Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related integrase3e-1377
NC_016818:859181:8751518751518763651215Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completesite-specific recombinase XerD3e-1377
NC_014965:2200974:2204394220439422057281335Vibrio vulnificus MO6-24/O chromosome I, complete sequenceintegrase5e-1376.3
NC_013173:953633:9630569630569651342079Desulfomicrobium baculatum DSM 4028, complete genomehypothetical protein5e-1376.3
NC_009720:216589:2196452196452212971653Xanthobacter autotrophicus Py2, complete genomeintegrase family protein4e-1376.3
NC_015850:736680:7427277427277441751449Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein6e-1375.9
NC_017075:1674758:1676897167689716786241728Rubrivivax gelatinosus IL144, complete genomephage integrase family protein8e-1375.5
NC_009434:3611738:3619731361973136210711341Pseudomonas stutzeri A1501, complete genomeintegrase2e-1273.9
NC_014121:4299500:4311727431172743129771251Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative integrase3e-1273.9
NC_010682:460523:4676864676864692871602Ralstonia pickettii 12J chromosome 1, complete sequencephage integrase6e-1272.8
NC_008347:1636660:1655238165523816569861749Maricaulis maris MCS10, complete genomephage integrase family protein9e-1272
NC_010688:1192410:1205404120540412068521449Xanthomonas campestris pv. campestris, complete genomephage-related integrase1e-1171.2
NC_013173:953633:9706779706779727402064Desulfomicrobium baculatum DSM 4028, complete genomeintegrase family protein2e-1170.9
NC_003919:1716831:1730204173020417315381335Xanthomonas axonopodis pv. citri str. 306, complete genomeintegrase2e-1170.9
NC_007516:1323105:1326213132621313277961584Synechococcus sp. CC9605, complete genomehypothetical protein3e-1170.5
NC_017271:3641705:3684013368401336854131401Xanthomonas campestris pv. raphani 756C chromosome, completeintegrase3e-1170.5
NC_007778:3470661:3470661347066134723071647Rhodopseudomonas palustris HaA2, complete genomePhage integrase5e-1169.7
NC_008435:1215437:1217650121765012195841935Rhodopseudomonas palustris BisA53, complete genomephage integrase family protein4e-1169.7
NC_016010:1169850:1180972118097211820451074Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeIntegrase XerC4e-1169.7
NC_010688:3030873:3061417306141730628171401Xanthomonas campestris pv. campestris, complete genomephage-related integrase4e-1169.7
NC_007086:2887875:2931121293112129322631143Xanthomonas campestris pv. campestris str. 8004, complete genomephage-related integrase6e-1169.3
NC_014972:3604534:3621721362172136228721152Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein1e-1068.2
NC_013446:4281250:4294269429426942959961728Comamonas testosteroni CNB-2, complete genomePhage integerase3e-1067
NC_010725:4618000:4625361462536146269831623Methylobacterium populi BJ001, complete genomelambda integrase-like/DNA breaking-rejoining enzyme, catalytic core5e-1066.2
NC_015850:1006980:1027150102715010289371788Acidithiobacillus caldus SM-1 chromosome, complete genomephage integrase6e-1065.9
NC_010511:915313:9290119290119306001590Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein1e-0965.1
NC_003911:1078949:1098451109845110995391089Silicibacter pomeroyi DSS-3, complete genomesite-specific recombinase, phage integrase family1e-0965.1
NC_014034:3111981:3126440312644031278311392Rhodobacter capsulatus SB1003 chromosome, complete genomephage integrase2e-0963.9
NC_009434:608765:6778376778376802902454Pseudomonas stutzeri A1501, complete genomehypothetical protein4e-0963.2
NC_020064:3825916:3832193383219338333921200Serratia marcescens FGI94, complete genomephage integrase family protein5e-0962.8
NC_011757:4293000:4318726431872643204951770Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein6e-0962.8
NC_020260:440000:4553004553004564781179Cronobacter sakazakii Sp291, complete genomeputative integrase7e-0962.4
NC_007086:3118116:312299731229973123545549Xanthomonas campestris pv. campestris str. 8004, complete genomephage-related integrase6e-0962.4
NC_011601:4856717:4861028486102848622391212Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase8e-0962
NC_013361:313540:3324433324433337201278Escherichia coli O26:H11 str. 11368 chromosome, complete genomeintegrase1e-0862
NC_009511:2726296:2731027273102727328081782Sphingomonas wittichii RW1 chromosome, complete genomephage integrase family protein1e-0862
NC_009434:3611738:3621234362123436224931260Pseudomonas stutzeri A1501, complete genomehypothetical protein2e-0860.8
NC_008702:815264:8306858306858323551671Azoarcus sp. BH72, complete genomeputative integrase2e-0860.8
NC_007973:2773427:2784562278456227859381377Ralstonia metallidurans CH34 chromosome 1, complete sequencephage integrase6e-0859.3
NC_007298:2689731:2698059269805926993271269Dechloromonas aromatica RCB, complete genomePhage integrase2e-0757.4
NC_011365:1969198:1993000199300019945951596Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeintegrase family protein4e-0756.6
NC_009850:1862602:1876559187655918780941536Arcobacter butzleri RM4018, complete genomehypothetical protein5e-0756.2
NC_014010:1392536:1425533142553314266781146Candidatus Puniceispirillum marinum IMCC1322 chromosome, completephage integrase7e-0755.8
NC_011663:2813033:2823925282392528257331809Shewanella baltica OS223 chromosome, complete genomeintegrase family protein3e-0653.5
NC_020911:1549065:1555207155520715567301524Octadecabacter antarcticus 307, complete genomeputative integrase6e-0652.8