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Query: NC_007951:4608560:4632905 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4632905, End: 4633558, Length: 654

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016589:2875000:290897629089762909596621Burkholderia sp. YI23 chromosome 1, complete sequenceglutathione S-transferase2e-67254
NC_004463:5722468:572292457229245723592669Bradyrhizobium japonicum USDA 110, complete genomeglutathione S-transferase1e-45183
NC_014640:6815264:684700768470076847669663Achromobacter xylosoxidans A8 chromosome, complete genomeglutathione S-transferase7e-39160
NC_008781:2883968:289913728991372899793657Polaromonas naphthalenivorans CJ2, complete genomeglutathione S-transferase-like protein1e-38159
NC_008543:582129:584287584287585006720Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceGlutathione S-transferase, N-terminal domain2e-38159
NC_007005:4857768:487843448784344879060627Pseudomonas syringae pv. syringae B728a, complete genomeGlutathione S-transferase, N-terminal5e-38157
NC_011001:854713:856869856869857588720Burkholderia cenocepacia J2315 chromosome 2, complete sequenceglutathione-S-tranferase family protein1e-37155
NC_004578:4940000:496249249624924963274783Pseudomonas syringae pv. tomato str. DC3000, complete genomeglutathione S-transferase family protein6e-37153
NC_012997:59407:781017810178772672Teredinibacter turnerae T7901, complete genomeglutathione S-transferase family protein3e-34144
NC_004129:5723787:575119157511915751814624Pseudomonas fluorescens Pf-5, complete genomeglutathione S-transferase domain protein8e-29127
NC_012988:4633930:463393046339304634586657Methylobacterium extorquens DM4, complete genomeglutathione S-transferase3e-26118
NC_010172:4185904:418722041872204187876657Methylobacterium extorquens PA1, complete genomeputative glutathione-S-transferase protein3e-26118
NC_012808:4235567:423556742355674236223657Methylobacterium extorquens AM1, complete genomeputative glutathione S-transferase3e-26118
NC_006677:1503513:150351315035131504160648Gluconobacter oxydans 621H, complete genomeGlutathione S-transferase2e-1995.5