Pre_GI: BLASTP Hits

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Query: NC_007951:4608560:4630195 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4630195, End: 4631385, Length: 1191

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016589:2875000:2905686290568629068911206Burkholderia sp. YI23 chromosome 1, complete sequencehypothetical protein3e-162571
NC_014307:3240430:3254477325447732557391263Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein4e-113408
NC_014311:3348102:3348922334892233501151194Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein1e-110400
NC_008825:564392:5841445841445852201077Methylibium petroleiphilum PM1, complete genomehypothetical protein9e-91333
NC_008752:4665699:4681079468107946822091131Acidovorax avenae subsp. citrulli AAC00-1, complete genomeprotein of unknown function DUF1851e-80300
NC_014914:439285:4410314410314421521122Taylorella equigenitalis MCE9 chromosome, complete genomehypothetical protein2e-65249
NC_008601:1560482:1591111159111115922981188Francisella tularensis subsp. novicida U112, complete genomehypothetical protein7e-54211
NC_010677:456277:4583214583214594571137Francisella tularensis subsp. mediasiatica FSC147, complete genomehypothetical protein2e-53210
NC_009257:775538:7828127828127839481137Francisella tularensis subsp. tularensis WY96-3418 chromosome,hypothetical protein2e-53210
NC_020541:268406:2707352707352719281194Rhodanobacter sp. 2APBS1, complete genomehypothetical protein1e-53210
NC_006570:1526071:1539240153924015403761137Francisella tularensis subsp. tularensis Schu 4, complete genomehypothetical protein4e-53209
NC_008245:1525877:1539046153904615401821137Francisella tularensis subsp. tularensis FSC 198, complete genomehypothetical protein4e-53209
NC_008369:291640:2957192957192968551137Francisella tularensis subsp. holarctica OSU18, complete genomehypothetical protein4e-53208
NC_009749:289695:2937742937742949101137Francisella tularensis subsp. holarctica FTA, complete genomehypothetical protein4e-53208
NC_007880:290059:2942072942072952741068Francisella tularensis subsp. holarctica, complete genomehypothetical protein3e-52206
NC_011206:262844:2858942858942870211128Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF1854e-52205
NC_016937:1525914:1539083153908315401441062Francisella tularensis subsp. tularensis TI0902 chromosome,hypothetical protein2e-51203
NC_016933:1601821:1614990161499016160511062Francisella tularensis TIGB03 chromosome, complete genomehypothetical protein2e-51203
NC_015682:1457004:1463556146355614646591104Thermodesulfobacterium sp. OPB45 chromosome, complete genomehypothetical protein2e-37157
NC_010730:627465:6427346427346438881155Sulfurihydrogenibium sp. YO3AOP1, complete genomeprotein of unknown function DUF1859e-33141
NC_012440:1874896:1887887188788718890531167Persephonella marina EX-H1, complete genomehypothetical protein9e-32138
NC_009483:1116385:1116385111638511175421158Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein7e-31135
NC_011146:3206000:3220540322054032217001161Geobacter bemidjiensis Bem, complete genomeprotein of unknown function DUF1855e-30132
NC_012918:1660477:1667331166733116684881158Geobacter sp. M21 chromosome, complete genomehypothetical protein7e-30131
NC_010794:885500:9041849041849053621179Methylacidiphilum infernorum V4, complete genomehypothetical protein8e-27121
NC_014973:3151701:3175265317526531764251161Geobacter sp. M18 chromosome, complete genomehypothetical protein6e-24112
NC_007513:987969:1013535101353510147131179Synechococcus sp. CC9902, complete genomehypothetical protein3e-23110
NC_008819:679320:6820756820756832771203Prochlorococcus marinus str. NATL1A, complete genomehypothetical protein5e-22105
NC_007335:117572:1193381193381205401203Prochlorococcus marinus str. NATL2A, complete genomehypothetical protein5e-2099
NC_014219:2509062:2519520251952025206591140Bacillus selenitireducens MLS10 chromosome, complete genomeprotein of unknown function DUF1853e-1893.6
NC_015186:573289:588641588641589615975Acidiphilium multivorum AIU301, complete genomehypothetical protein4e-1892.8
NC_009484:464342:479694479694480668975Acidiphilium cryptum JF-5 chromosome, complete genomehypothetical protein5e-1892.4
NC_008820:1356858:1357969135796913591861218Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein4e-1582.8
NC_008319:1306482:1307587130758713087651179Synechococcus sp. CC9311, complete genomehypothetical protein3e-1479.7
NC_005071:704882:7224737224737236901218Prochlorococcus marinus str. MIT 9313, complete genomehypothetical protein1e-1377.8
NC_013894:543901:566640566640567593954Thermocrinis albus DSM 14484 chromosome, complete genomeprotein of unknown function DUF1852e-1377
NC_013009:532000:535015535015535986972Neorickettsia risticii str. Illinois, complete genomeATP synthase beta subunit/transription termination factor rho3e-1169.7
NC_007798:520109:523005523005523976972Neorickettsia sennetsu str. Miyayama, complete genomehypothetical protein7e-1168.9