Some Help

Query: NC_007951:4608560:4628879 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4628879, End: 4629274, Length: 396

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016589:2875000:290440029044002904801402Burkholderia sp. YI23 chromosome 1, complete sequencedihydroneopterin aldolase3e-62236
NC_014307:3240430:325330032533003253692393Ralstonia solanacearum CFBP2957 chromosome, complete genomedihydroneopterin aldolase2e-56217
NC_015381:4182194:418219441821944182598405Burkholderia gladioli BSR3 chromosome 1, complete sequenceDihydroneopterin aldolase2e-47187
NC_008825:564392:586080586080586481402Methylibium petroleiphilum PM1, complete genomeconserved hypothetical dihydroneopterin aldolase9e-45178
NC_019815:679592:680846680846681199354Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneidihydroneopterin aldolase2e-0651.2
NC_012969:2476318:251541525154152515765351Methylovorus glucosetrophus SIP3-4 chromosome, complete genomedihydroneopterin aldolase3e-0650.4
NC_007205:60069:980979809798522426Candidatus Pelagibacter ubique HTCC1062, complete genomedihydroneopterin aldolase4e-0650.1
NC_012968:2228943:225022822502282250584357Methylotenera mobilis JLW8, complete genomedihydroneopterin aldolase4e-0650.1
NC_014733:2363838:238426523842652384660396Methylovorus sp. MP688 chromosome, complete genomedihydroneopterin aldolase6e-0649.7
NC_014414:2467639:246838224683822468771390Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein7e-0649.3