Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:4608560:4618651 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4618651, End: 4618953, Length: 303

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014640:6815264:683492468349246835211288Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein6e-25112
NC_011761:999791:100814210081421008399258Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein3e-22103
NC_017075:3165858:318297331829733183269297Rubrivivax gelatinosus IL144, complete genomehypothetical protein3e-1270.5
NC_011894:6888562:691169669116966912046351Methylobacterium nodulans ORS 2060, complete genomehypothetical protein3e-1270.5
NC_014640:4293430:433810943381094338390282Achromobacter xylosoxidans A8 chromosome, complete genomebcep22gp48 domain-containing protein2e-0754.7
NC_010612:4837346:485164348516434851963321Mycobacterium marinum M, complete genomehypothetical protein5e-0753.1