Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:4576825:4594781 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4594781, End: 4595098, Length: 318

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009617:3926843:395018439501843950738555Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeRNA 2'-phosphotransferase-like protein2e-21100
NC_013730:4857090:486585048658504866398549Spirosoma linguale DSM 74, complete genomephosphotransferase KptA/Tpt15e-2199.8
NC_014958:1268559:128811512881151288675561Deinococcus maricopensis DSM 21211 chromosome, complete genomeRNA 2'-phosphotransferase2e-1994
NC_017047:2260118:227181322718132272385573Rahnella aquatilis HX2 chromosome, complete genomephosphotransferase KptA/Tpt12e-1787.4
NC_004547:442927:452395452395452937543Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeRNA 2'-phosphotransferase1e-1685.1
NC_019673:7598026:761148176114817611996516Saccharothrix espanaensis DSM 44229 complete genomePhosphotransferase KptA/Tpt12e-1684.3
NC_013592:4511478:451998445199844520526543Dickeya dadantii Ech586, complete genomephosphotransferase KptA/Tpt13e-1684
NC_010498:4967724:498597049859704986554585Escherichia coli SMS-3-5, complete genomeRNA 2'-phosphotransferase5e-1683.2
NC_006350:845513:877250877250877804555Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative RNA 2'-phosphotransferase5e-1683.2
NC_015873:1411718:143420214342021434765564Megasphaera elsdenii DSM 20460, complete genomeprobable RNA 2'-phosphotransferase2e-1581.3
NC_015379:4282815:429287342928734293457585Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative RNA 2-phosphotransferase2e-1374.7
NC_009656:44500:643006430064848549Pseudomonas aeruginosa PA7 chromosome, complete genomeRNA 2'-phosphotransferase-like protein1e-1272
NC_016641:2618587:261858726185872619123537Paenibacillus terrae HPL-003 chromosome, complete genomeputative RNA 2'-phosphotransferase1e-1168.6
NC_009012:3591687:359460935946093595157549Clostridium thermocellum ATCC 27405, complete genomephosphotransferase KptA/Tpt13e-1167.4
NC_014654:302000:320914320914321459546Halanaerobium sp. 'sapolanicus' chromosome, complete genomephosphotransferase KptA/Tpt12e-0961.2
NC_012914:336750:357625357625358203579Paenibacillus sp. JDR-2, complete genomephosphotransferase KptA/Tpt15e-0856.6
NC_009009:540992:553770553770554315546Streptococcus sanguinis SK36, complete genomeRNA:NAD 2'-phosphotransferase, putative1e-0755.5
NC_016935:7872425:791506179150617915645585Paenibacillus mucilaginosus 3016 chromosome, complete genomephosphotransferase KptA/Tpt11e-0755.1