Pre_GI: BLASTP Hits

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Query: NC_007951:4576825:4582122 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4582122, End: 4582559, Length: 438

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005241:157741:157424157424157744321Ralstonia eutropha H16 megaplasmid pHG1, complete sequencetransposition-related protein7e-2199.4
NC_014539:888562:893145893145893561417Burkholderia sp. CCGE1003 chromosome 1, complete sequencetransposase IS3/IS911 family protein3e-1890.5
NC_007651:3064530:314390831439083144315408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein1e-1478.2
NC_007651:1620000:162740116274011627808408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein1e-1478.2
NC_007651:3560652:358535335853533585760408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein1e-1478.2
NC_007651:1620000:164485016448501645257408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein1e-1478.2
NC_007651:3064530:307232730723273072734408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein1e-1478.2
NC_007651:72952:833758337583782408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein1e-1478.2
NC_007651:1620000:163739216373921637799408Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein1e-1478.2
NC_016822:2940000:295990729599072960308402Shigella sonnei 53G, complete genomehypothetical protein1e-1375.1
NC_009788:16360:182921829218681390Escherichia coli E24377A plasmid pETEC_73, complete sequenceIS66 family element, orf12e-1374.7
NC_009801:2898426:294035029403502940739390Escherichia coli E24377A, complete genomeIS66 family element, orf12e-1374.7
NC_009801:1756610:176096717609671761356390Escherichia coli E24377A, complete genomeIS66 family element, orf12e-1374.7
NC_009801:1392696:140961714096171410006390Escherichia coli E24377A, complete genomeIS66 family element, orf12e-1374.7
NC_009790:42112:671896718967578390Escherichia coli E24377A plasmid pETEC_74, complete sequenceIS66 family element2e-1374.7
NC_013008:4643825:464522546452254645605381Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase, ISEc82e-1374.7
NC_002695:1794635:180913718091371809517381Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1374.7
NC_002695:3468873:348280134828013483181381Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1374.7
NC_010660:86445:950599505995448390Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS66 family element, orf12e-1374.7
NC_010660:33109:446374463745026390Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS66 family element, orf12e-1374.7
NC_002695:1364833:138386013838601384261402Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1374.7
NC_013008:1715831:172970317297031730104402Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase2e-1374.7
NC_013353:3853082:387813638781363878537402Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-1374.7
NC_013008:1307392:132773213277321328133402Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-1374.7
NC_011745:333061:335652335652336053402Escherichia coli ED1a chromosome, complete genomeputative transposase, IS3 family2e-1374.7
NC_002655:4653160:465504246550424655443402Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by ISEc8 within prophage CP-933L2e-1374.7
AP010958:3853082:387813638781363878537402Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-1374.7
NC_002695:4584177:458605945860594586460402Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1374.7
NC_004431:3409389:342716934271693427570402Escherichia coli CFT073, complete genomeUnknown protein encoded by ISEc8 within prophage2e-1374.7
NC_002655:2264773:227763922776392278040402Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded in ISEc82e-1374.7
NC_013008:3525428:354178635417863542187402Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-1374.7
NC_013361:1284579:130444313044431304844402Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-1374.7
NC_016822:2940000:294140529414052941602198Shigella sonnei 53G, complete genomehypothetical protein4e-1373.2
NC_009256:2907998:291244329124432912877435Burkholderia vietnamiensis G4 chromosome 1, complete sequencetransposase IS3/IS911 family protein9e-1372
NC_009255:1105786:111509111150911115525435Burkholderia vietnamiensis G4 chromosome 2, complete sequencetransposase IS3/IS911 family protein9e-1372
NC_009254:745706:763090763090763524435Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase IS3/IS911 family protein9e-1372
NC_009078:2718741:275026927502692750664396Burkholderia pseudomallei 1106a chromosome II, complete sequenceTransposase1e-1272
NC_009254:442360:460991460991461386396Burkholderia vietnamiensis G4 chromosome 3, complete sequencetransposase IS3/IS911 family protein2e-1271.6
NC_011000:1262324:128276612827661283161396Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative transposase2e-1270.9
NC_011001:302500:303100303100303495396Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative transposase2e-1270.9
NC_011002:703194:719199719199719606408Burkholderia cenocepacia J2315 chromosome 3, complete sequenceputative transposase9e-1165.5
NC_014228:2270000:229328422932842293916633Xenorhabdus nematophila ATCC 19061, complete genomeputative transposase3e-1063.9
NC_007435:1446916:147844414784441478839396Burkholderia pseudomallei 1710b chromosome II, complete sequenceputative DNA-binding protein4e-1063.5
NC_013361:3867558:389845438984543898939486Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein7e-1062.8
NC_009801:1756610:175854817585481759012465Escherichia coli E24377A, complete genomeIS66 family element, orf17e-1062.8
NC_013716:2476334:248499424849942485671678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A8e-1062.4
NC_013716:3708415:372254337225433723220678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A8e-1062.4
NC_013716:1138441:114611011461101146787678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A8e-1062.4
NC_013716:4824541:483553548355354836212678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A8e-1062.4
NC_013716:2764550:279093027909302791607678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A8e-1062.4
NC_013716:4306695:431035743103574311034678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A8e-1062.4
NC_013716:3327881:335750833575083358185678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A8e-1062.4
NC_013716:2764550:279183027918302792507678Citrobacter rodentium ICC168, complete genomeISCro1 transposase A8e-1062.4
NC_013361:3313284:331480333148033315450648Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-0962
NC_009790:42112:442404424044917678Escherichia coli E24377A plasmid pETEC_74, complete sequenceIS66 family element, orf11e-0962
NC_009801:3374501:338814533881453388822678Escherichia coli E24377A, complete genomeIS66 family element, orf11e-0962
NC_007607:87000:901639016390831669Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceputative transposase5e-0959.7
NC_007385:157516:161897161897162565669Shigella sonnei Ss046 plasmid pSS_046, complete sequenceputative transposase6e-0959.7
NC_010515:2691000:270497527049752705391417Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetransposase IS3/IS911 family protein1e-0858.5
NC_014839:68308:881018810188736636Pantoea sp. At-9b plasmid pPAT9B02, complete sequencetransposase IS3/IS911 family protein3e-0857
NC_012791:721813:725621725621726007387Variovorax paradoxus S110 chromosome 1, complete genometransposase IS3/IS911 family protein1e-0755.5
NC_013353:5090696:511675551167555117429675Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-0755.1
NC_013353:3627355:362961136296113630285675Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-0755.1
NC_011601:3338888:334114433411443341818675Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase Orf1 of IS6831e-0755.1
AP010958:5090696:511675551167555117429675Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-0755.1
AP010958:3627355:362961136296113630285675Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-0755.1
NC_015383:229036:231211231211231741531Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequencetransposase IS3/IS911 family protein3e-0753.9
NC_007607:87000:116076116076116663588Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceISSfl4 ORF13e-0753.5
NC_004337:3590323:385190438519043852578675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF14e-0753.5
NC_004851:157675:173438173438174112675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF14e-0753.5
NC_017319:155958:173413173413174042630Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF14e-0753.5
NC_008258:401786:423776423776424450675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF14e-0753.5
NC_008258:2045000:205991720599172060591675Shigella flexneri 5 str. 8401, complete genomeISSfl4 ORF14e-0753.5
NC_004337:367687:386125386125386799675Shigella flexneri 2a str. 301, complete genomeISSfl4 ORF14e-0753.5
NC_017319:155958:169634169634170308675Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceISSfl4 ORF14e-0753.5
NC_017328:385552:403989403989404663675Shigella flexneri 2002017 chromosome, complete genomeISSfl4 ORF14e-0753.5
NC_004741:366822:385926385926386423498Shigella flexneri 2a str. 2457T, complete genomeISSfl3 orfA5e-0753.1
NC_016845:2274500:229580922958092296213405Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein5e-0753.1
NC_013941:3676146:367840236784023679076675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeISSfl3 OrfA6e-0752.8
NC_010623:1961685:199889019988901999408519Burkholderia phymatum STM815 chromosome 2, complete sequencetransposase IS3/IS911 family protein8e-0752.4
NC_007951:769500:778440778440778835396Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase8e-0752.4
NC_002655:3919545:392180139218013922475675Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by ISEc81e-0651.6
NC_002695:3852233:385448938544893855163675Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-0651.6
NC_011353:3956630:395888639588863959560675Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeISSfl4 ORF11e-0651.6
NC_013008:3911356:391361239136123914286675Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-0651.6
NC_004851:157675:169705169705170379675Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceISSfl4 ORF12e-0651.2
NC_007626:3522265:360826536082653608663399Magnetospirillum magneticum AMB-1, complete genomeTransposase and inactivated derivative2e-0650.8
NC_003047:3360000:341564734156473416033387Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSPOSASE NUMBER 1 FOR INSERTION SEQUENCE ISRM264e-0650.4