Pre_GI: BLASTP Hits

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Query: NC_007951:3655088:3668440 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3668440, End: 3668844, Length: 405

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015458:3077804:3097937309793730991391203Pusillimonas sp. T7-7 chromosome, complete genomeextracellular ligand-binding receptor3e-32137
NC_014641:20103:4203442034432091176Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceextracellular ligand-binding receptor 62e-30131
NC_009937:5033152:5040446504044650416151170Azorhizobium caulinodans ORS 571, complete genomeputative substrate-binding protein3e-23107
NC_008314:477722:507399507399507962564Ralstonia eutropha H16 chromosome 2, complete sequencefragment of ABC-type transport system,periplasmic component: APC family3e-1890.1
NC_016585:1004000:1019348101934810205441197Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencebranched chain amino acid ABC transporter substrate-binding protein1e-1685.1
NC_015387:2072237:2073114207311420742381125Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeExtracellular ligand-binding receptor5e-1269.7
NC_014391:4644500:4645341464534146466811341Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeextracellular ligand-binding receptor1e-1065.5
NC_003047:3202125:3216094321609432172991206Sinorhizobium meliloti 1021, complete genomePUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN6e-0959.3
NC_016147:3023180:3043998304399830451161119Pseudoxanthomonas spadix BD-a59 chromosome, complete genometwin-arginine translocation pathway signal2e-0858.2
NC_010170:1219641:1241603124160312428051203Bordetella petrii, complete genomeputative Substrate-binding periplasmic protein4e-0857
NC_015727:1294532:1319872131987213210951224Cupriavidus necator N-1 plasmid BB1p, complete sequenceABC transporter substrate-binding protein5e-0856.6
NC_007973:3065632:3067829306782930689981170Ralstonia metallidurans CH34 chromosome 1, complete sequenceextracellular ligand-binding receptor9e-0855.5
NC_016885:1153277:1177898117789811791841287Pyrobaculum oguniense TE7 chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein1e-0755.1
NC_008786:1507139:1526660152666015278381179Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor1e-0755.1
NC_018691:896464:8964648964648976121149Alcanivorax dieselolei B5 chromosome, complete genomeABC-type branched-chain amino acid transport system, periplasmic component3e-0753.9
NC_009718:579291:5862885862885874481161Fervidobacterium nodosum Rt17-B1, complete genomeextracellular ligand-binding receptor3e-0753.9
NC_020210:2044944:2053712205371220549561245Geobacillus sp. GHH01, complete genomeputative leucine ABC transporter substrate-binding protein6e-0752.8
NC_010681:74587:7995179951811291179Burkholderia phytofirmans PsJN chromosome 1, complete sequenceExtracellular ligand-binding receptor1e-0652
NC_014974:1076565:1094174109417410953641191Thermus scotoductus SA-01 chromosome, complete genomeextracellular ligand-binding receptor1e-0652
NC_010511:637214:6536716536716549121242Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor1e-0651.6
NC_013947:4413382:4423401442340144246001200Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeExtracellular ligand-binding receptor2e-0651.2
NC_017082:5925357:5928737592873759299661230Bradyrhizobium sp. S23321, complete genomeABC transporter substrate-binding protein2e-0651.2
NC_014323:3976351:3980128398012839812701143Herbaspirillum seropedicae SmR1 chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein3e-0650.4
NC_014666:4043279:4052023405202340532851263Frankia sp. EuI1c chromosome, complete genomehypothetical protein3e-0650.4
NC_010511:6067000:6067154606715460683591206Methylobacterium sp. 4-46 chromosome, complete genomeputative ABC branched-chain amino transporter, periplasmic binding protein3e-0650.4
NC_010623:1961685:2016998201699820182271230Burkholderia phymatum STM815 chromosome 2, complete sequenceextracellular ligand-binding receptor5e-0650.1
NC_010511:4313769:4336960433696043381801221Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor5e-0649.7
NC_014831:2133060:2141827214182721430561230Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family6e-0649.7
NC_011297:787932:7916897916897928191131Dictyoglomus thermophilum H-6-12, complete genomebranched chain amino acid ABC transporter6e-0649.7
NC_013740:15401:1741117411185891179Acidaminococcus fermentans DSM 20731, complete genomeExtracellular ligand-binding receptor6e-0649.3
NC_007336:66000:7432674326755551230Ralstonia eutropha JMP134 megaplasmid, complete sequenceExtracellular ligand-binding receptor9e-0648.9
NC_013592:3263005:3282449328244932835761128Dickeya dadantii Ech586, complete genomeExtracellular ligand-binding receptor9e-0648.9
NC_013939:913890:9285399285399296781140Deferribacter desulfuricans SSM1, complete genomebranched-chain amino acid ABC transporter substrate-binding protein1e-0548.9