Pre_GI: BLASTP Hits

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Query: NC_007951:3631772:3631772 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3631772, End: 3632398, Length: 627

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007348:1903937:192417619241761925033858Ralstonia eutropha JMP134 chromosome 2, complete sequenceputative esterase1e-32139
NC_015684:3157941:318028431802843181186903Oligotropha carboxidovorans OM5 chromosome, complete genomehydrolase1e-27122
NC_011386:931140:943270943270944172903Oligotropha carboxidovorans OM5, complete genomeputative esterase1e-27122
NC_007973:3065632:306994930699493070890942Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein3e-27121
NC_012779:1449500:149817914981791499057879Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-27120
NC_011757:1246000:128319312831931284023831Methylobacterium chloromethanicum CM4, complete genomehypothetical protein1e-0962.8
NC_014834:2641514:264334626433462644191846Rhodopseudomonas palustris DX-1 chromosome, complete genomehypothetical protein2e-0962.8
NC_010571:1334000:135398013539801354813834Opitutus terrae PB90-1, complete genomeAlpha/beta hydrolase fold-3 domain protein9e-0960.1
NC_011898:2509267:252684325268432527778936Clostridium cellulolyticum H10, complete genomeAlpha/beta hydrolase fold-3 domain protein2e-0859.3