Pre_GI: BLASTP Hits

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Query: NC_007951:2904644:2906217 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2906217, End: 2907596, Length: 1380

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009767:5464796:5465677546567754677252049Roseiflexus castenholzii DSM 13941, complete genomeintegral membrane sensor signal transduction histidine kinase7e-2099
NC_020995:2255521:2256907225690722579741068Enterococcus casseliflavus EC20, complete genometwo-component system sensor histidine kinase1e-1481.3
NC_014355:3951855:3952908395290839540771170Candidatus Nitrospira defluvii, complete genomeputative histidine kinase3e-1480.1
NC_016609:7565483:7569334756933475724833150Niastella koreensis GR20-10 chromosome, complete genomeputative signal transduction histidine kinase1e-1378.2
NC_007778:3470661:3496354349635434987592406Rhodopseudomonas palustris HaA2, complete genomeputative signal transduction histidine kinase2e-1377.8
NC_014761:417377:4214104214104231041695Oceanithermus profundus DSM 14977 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-1377.4
NC_006177:520055:5342435342435361441902Symbiobacterium thermophilum IAM 14863, complete genometwo-component sensor histidine kinase5e-1375.9
NC_013037:2043921:2064588206458820665821995Dyadobacter fermentans DSM 18053, complete genomehistidine kinase2e-1274.3
NC_008025:1799106:1813191181319118148851695Deinococcus geothermalis DSM 11300, complete genomeperiplasmic sensor signal transduction histidine kinase2e-1274.3
NC_007795:1922000:1973581197358119746241044Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehistidine kinase, putative2e-1273.9
NC_012660:3179980:3206798320679832079491152Pseudomonas fluorescens SBW25 chromosome, complete genomeputative two-component system sensor kinase8e-1272
NC_019940:389979:4080324080324096451614Thioflavicoccus mobilis 8321 chromosome, complete genomePAS domain-containing protein1e-1171.6
NC_015065:18189:3935139351424523102Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceintegral membrane sensor signal transduction histidine kinase2e-1170.9
NC_003272:2560329:2564524256452425673582835Nostoc sp. PCC 7120, complete genometwo-component sensor histidine kinase2e-1170.9
NC_011146:2614500:2623115262311526243411227Geobacter bemidjiensis Bem, complete genomePAS/PAC sensor signal transduction histidine kinase3e-1170.1
NC_012918:2277500:2284942228494222862071266Geobacter sp. M21 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase4e-1169.7
NC_020054:2147857:2153110215311021546181509Fibrella aestuarina BUZ 2 drat genomehistidine kinase6e-1169.3
NC_015660:3518931:3537683353768335399472265Geobacillus thermoglucosidasius C56-YS93 chromosome, completeputative signal transduction histidine kinase6e-1169.3
NC_003295:199354:2122532122532136291377Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE TWO COMPONENT SYSTEM SENSOR KINASE TRANSCRIPTION REGULATOR PROTEIN6e-1168.9
NC_007907:4692336:4711510471151047129581449Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-1168.9
NC_011725:5043198:5060806506080650631242319Bacillus cereus B4264 chromosome, complete genomeComP1e-1068.6
NC_011830:1288984:1288984128898412904771494Desulfitobacterium hafniense DCB-2, complete genomehistidine kinase1e-1068.6
NC_010725:4035397:4074774407477440761921419Methylobacterium populi BJ001, complete genomeintegral membrane sensor signal transduction histidine kinase1e-1068.2
NC_017208:5096759:5112321511232151144682148Bacillus thuringiensis serovar chinensis CT-43 chromosome, completesensor protein comP1e-1068.2
NC_004547:2285092:2306203230620323080111809Erwinia carotovora subsp. atroseptica SCRI1043, complete genomenitrate/nitrite sensor kinase1e-1068.2
NC_009328:448224:4936944936944947191026Geobacillus thermodenitrificans NG80-2 chromosome, complete genometwo-component sensor histidine kinase1e-1068.2
NC_019771:1356000:1365602136560213715925991Anabaena cylindrica PCC 7122, complete genomemulti-sensor signal transduction multi-kinase2e-1067.4
NC_014829:3305762:3306396330639633074361041Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase3e-1067
NC_014206:345499:3608743608743631172244Geobacillus sp. C56-T3 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase1e-0965.1
NC_012483:1567253:1573082157308215760452964Acidobacterium capsulatum ATCC 51196, complete genometwo-component system sensor protein, putative2e-0964.7
NC_015732:140087:1446471446471459841338Spirochaeta caldaria DSM 7334 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-0964.7
NC_016114:3275004:3281501328150132829281428Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase1e-0964.7
NC_010086:20876:4489744897462761380Burkholderia multivorans ATCC 17616 chromosome 2, completeintegral membrane sensor signal transduction histidine kinase1e-0964.7
NC_007168:665284:6812866812866823201035Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein1e-0964.7
NC_015856:4975815:4997349499734949987191371Collimonas fungivorans Ter331 chromosome, complete genomesensor histidine kinase2e-0964.3
NC_016609:8251438:825755482575548258300747Niastella koreensis GR20-10 chromosome, complete genomeputative signal transduction histidine kinase3e-0963.9
NC_008148:2498000:2526117252611725280391923Rubrobacter xylanophilus DSM 9941, complete genomemulti-sensor signal transduction histidine kinase3e-0963.5
NC_018750:1591895:1609088160908816102331146Streptomyces venezuelae ATCC 10712, complete genomeputative two-component system sensor kinase4e-0963.2
NC_016599:3616204:3632671363267136345481878Owenweeksia hongkongensis DSM 17368 chromosome, complete genomesignal transduction histidine kinase5e-0962.8
NC_011662:535613:5367005367005380941395Thauera sp. MZ1T, complete genomemulti-sensor signal transduction histidine kinase5e-0962.8
NC_014209:1487699:1504499150449915056651167Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,DegS sensor signal transduction histidine kinase7e-0962.4
NC_015844:3524175:3548598354859835504991902Zobellia galactanivorans, complete genometwo-component system-Sensor histidine kinase7e-0962.4
NC_018000:2816637:2824665282466528263441680Sinorhizobium fredii USDA 257 chromosome, complete genomesensor histidine kinase protein9e-0962
NC_010627:532407:5309505309505324101461Burkholderia phymatum STM815 plasmid pBPHY02, complete sequenceintegral membrane sensor signal transduction histidine kinase1e-0861.6
NC_015703:3325780:333229833322983333104807Runella slithyformis DSM 19594 chromosome, complete genomeputative signal transduction histidine kinase2e-0861.2
NC_013207:19154:291672916729838672Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446histidine kinase2e-0861.2
NC_007356:1221500:1235417123541712365861170Dehalococcoides sp. CBDB1, complete genomesensor histidine kinase2e-0860.8
NC_015589:3053504:3051538305153830535321995Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeATP-binding region ATPase domain-containing protein2e-0860.8
NC_015497:2859724:2872601287260128739951395Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-0860.8
NC_009725:2072475:2087157208715720882301074Bacillus amyloliquefaciens FZB42, complete genometwo-component sensor histidine kinase2e-0860.8
NC_007907:2306561:2349517234951723515652049Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0860.5
NC_007907:2306561:2339335233933523413832049Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0860.5
NC_014215:1929000:193729919372991938222924Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Two-component system sensor kinase. Membrane protein2e-0860.5
NC_007298:1129889:1129889112988911312771389Dechloromonas aromatica RCB, complete genomeATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase, dimerization and phosphoacceptor region3e-0860.5
NC_016887:3255500:3257326325732632591371812Nocardia cyriacigeorgica GUH-2, complete genomeTwo-component system sensor kinase3e-0860.1
NC_009328:2161116:2191640219164021939042265Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesensor protein ComP3e-0860.1
NC_017353:646195:6603056603056613481044Staphylococcus lugdunensis N920143, complete genomeputative histidine kinase3e-0860.1
NC_014008:1246642:1263286126328612654422157Coraliomargarita akajimensis DSM 45221 chromosome, complete genomehistidine kinase4e-0859.7
NC_009465:938378:9513849513849528681485Candidatus Vesicomyosocius okutanii HA, complete genometwo-component system, nitrate/nitrite sensor histidine kinase5e-0859.7
NC_016023:1419217:1432872143287214340171146Bacillus coagulans 36D1 chromosome, complete genomeputative signal transduction histidine kinase8e-0858.9
NC_014960:1697818:1729807172980717309401134Anaerolinea thermophila UNI-1, complete genometwo-component sensor histidine kinase7e-0858.9
NC_006270:4149004:4149004414900441501461143Bacillus licheniformis ATCC 14580, complete genomeHypothetical ATP-binding region, ATPase-like1e-0758.5
NC_013730:5877879:5877879587787958809533075Spirosoma linguale DSM 74, complete genomehistidine kinase1e-0758.2
NC_015856:2146713:2150921215092121538752955Collimonas fungivorans Ter331 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase1e-0758.2
NC_014314:1485500:1504752150475215065751824Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completemulti-sensor signal transduction histidine kinase1e-0758.2
NC_003295:2507850:2511607251160725127581152Ralstonia solanacearum GMI1000, complete genomePUTATIVE TWO-COMPONENT SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN2e-0757.8
NC_014206:1497942:1507419150741915084381020Geobacillus sp. C56-T3 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase2e-0757.8
NC_015381:2405446:2405446240544624075182073Burkholderia gladioli BSR3 chromosome 1, complete sequenceSensory box histidine kinase2e-0757.8
NC_014915:2092678:2107905210790521089241020Geobacillus sp. Y412MC52 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase2e-0757.8
NC_018720:993869:1020155102015510215371383Bifidobacterium asteroides PRL2011 chromosome, complete genometwo-component system sensor kinase2e-0757.8
NC_013411:2951559:2967974296797429689931020Geobacillus sp. Y412MC61, complete genomePAS/PAC sensor signal transduction histidine kinase2e-0757.8
NC_012962:869295:8718958718958734391545Photorhabdus asymbiotica, complete genometwo-component sensor histidine kinase uhpb, phosphorylates uhpa2e-0757.8
NC_006087:2008000:201076120107612011630870Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-0757.8
NC_010572:188500:2099672099672111511185Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative two-component system sensor kinase2e-0757.4
NC_006322:4149500:414955741495574150261705Bacillus licheniformis ATCC 14580, complete genomeYvfT2e-0757.4
NC_008596:1933836:1951266195126619528521587Mycobacterium smegmatis str. MC2 155, complete genomesensor histidine kinase MtrB2e-0757.4
NC_019897:329945:3635003635003646331134Thermobacillus composti KWC4 chromosome, complete genomesignal transduction histidine kinase3e-0757
NC_006510:2110430:2127659212765921286811023Geobacillus kaustophilus HTA426, complete genometwo-component sensor histidine kinase3e-0757
NC_008610:1068429:1084270108427010857541485Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),signal transduction histidine kinase, nitrate/nitrite-specific, NarQ3e-0756.6
NC_007650:1192310:1195310119531011967011392Burkholderia thailandensis E264 chromosome II, complete sequencesensory box histidine kinase/response regulator3e-0756.6
NC_004369:2968251:2968251296825129695401290Corynebacterium efficiens YS-314, complete genomeputative two-component sensory kinase4e-0756.6
NC_008571:2229369:224733822473382248144807Gramella forsetii KT0803, complete genometwo-component system sensor histidine kinase4e-0756.6
NC_007645:829500:8357558357558372211467Hahella chejuensis KCTC 2396, complete genomeSignal transduction histidine kinase, glucose-6-phosphate specific5e-0756.2
NC_006322:2658587:2677845267784526789271083Bacillus licheniformis ATCC 14580, complete genomehypothetical protein5e-0756.2
NC_006270:2657726:2676985267698526780641080Bacillus licheniformis ATCC 14580, complete genometwo-component sensor histidine kinase5e-0756.2
NC_002944:1881405:1903102190310219046401539Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein4e-0756.2
NC_016631:4688000:4704749470474947078293081Granulicella mallensis MP5ACTX8 chromosome, complete genomehistidine kinase6e-0755.8
NC_015683:2469481:2471806247180624730021197Corynebacterium ulcerans BR-AD22 chromosome, complete genometwo-component system sensor kinase protein6e-0755.8
NC_015761:2444833:2459617245961724613171701Salmonella bongori NCTC 12419, complete genomenitrate/nitrite sensor protein NarQ6e-0755.8
NC_007644:3229:2327023270247331464Moorella thermoacetica ATCC 39073, complete genomeperiplasmic sensor signal transduction histidine kinase9e-0755.5
NC_013093:3068486:3097790309779030990791290Actinosynnema mirum DSM 43827, complete genomehistidine kinase9e-0755.5
NC_009659:1024201:1030147103014710320271881Janthinobacterium sp. Marseille chromosome, complete genomesensory box histidine kinase1e-0655.1
NC_012491:1293086:1315300131530013176752376Brevibacillus brevis NBRC 100599, complete genometwo-component sensor histidine kinase1e-0655.1
NC_014960:1910202:1925461192546119270711611Anaerolinea thermophila UNI-1, complete genomeABC transporter ATP-binding protein1e-0655.1
NC_007005:2191500:2214084221408422152681185Pseudomonas syringae pv. syringae B728a, complete genomeATP-binding region, ATPase-like:Histidine kinase1e-0654.7
NC_010725:3992948:3992948399294839950142067Methylobacterium populi BJ001, complete genomemulti-sensor signal transduction histidine kinase1e-0654.7
NC_014829:3877701:3893197389319738943301134Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeDegS sensor signal transduction histidine kinase2e-0654.7
NC_014394:2228470:2238632223863222426634032Gallionella capsiferriformans ES-2 chromosome, complete genomemulti-sensor signal transduction histidine kinase2e-0654.3
NC_016943:1314500:1329748132974813308811134Blastococcus saxobsidens DD2, complete genomeTwo component signal transduction histidine kinase2e-0654.3
NC_016047:2658000:2660010266001026611011092Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetwo-component sensor histidine kinase2e-0654.3
NC_016935:7426389:7434146743414674359631818Paenibacillus mucilaginosus 3016 chromosome, complete genomeLuxR family two component transcriptional regulator2e-0653.9
NC_011831:2795819:2794032279403227958221791Chloroflexus aggregans DSM 9485, complete genomehistidine kinase3e-0653.9
NC_004461:2002000:2004665200466520056991035Staphylococcus epidermidis ATCC 12228, complete genometwo component sensor histidine kinase3e-0653.5
NC_002952:2550500:2553344255334425543781035Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative histidine kinase5e-0653.1
NC_017342:857630:8741268741268751601035Staphylococcus aureus subsp. aureus TCH60 chromosome, completesensor histidine kinase5e-0653.1
NC_014364:1263427:1284482128448212868182337Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeATP-binding region ATPase domain protein4e-0653.1
NC_018000:3371829:3373842337384233756021761Sinorhizobium fredii USDA 257 chromosome, complete genomesensor kinase protein4e-0653.1
NC_018750:6132619:615809461580946159080987Streptomyces venezuelae ATCC 10712, complete genometwo-component sensor histidine kinase4e-0653.1
NC_013501:1140390:1152399115239911553022904Rhodothermus marinus DSM 4252, complete genomehistidine kinase5e-0652.8
NC_019897:4014485:4039610403961040407611152Thermobacillus composti KWC4 chromosome, complete genomehistidine kinase5e-0652.8
NC_015379:2751342:2751342275134227525561215Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative histidine kinase, Classic5e-0652.8
NC_013730:834500:8555708555708571501581Spirosoma linguale DSM 74, complete genomehistidine kinase6e-0652.8
NC_008752:4665699:4686650468665046880861437Acidovorax avenae subsp. citrulli AAC00-1, complete genomeintegral membrane sensor signal transduction histidine kinase8e-0652.4
NC_014318:1320170:1337067133706713382001134Amycolatopsis mediterranei U32 chromosome, complete genometwo-component system histidine kinase7e-0652.4
NC_017186:1320186:1337083133708313382161134Amycolatopsis mediterranei S699 chromosome, complete genometwo-component system histidine kinase7e-0652.4
NC_010609:1077453:1076405107640510774601056Lactobacillus reuteri JCM 1112, complete genometwo component sensor histidine kinase7e-0652.4
NC_014210:2372813:2386026238602623873601335Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integral membrane sensor signal transduction histidine kinase8e-0652
NC_016631:4423658:4435012443501244380293018Granulicella mallensis MP5ACTX8 chromosome, complete genomehistidine kinase1e-0552