Pre_GI: BLASTP Hits

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Query: NC_007951:2233676:2251477 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2251477, End: 2251776, Length: 300

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002678:4859111:487275848727584873120363Mesorhizobium loti MAFF303099, complete genometransposase6e-1062.8
NC_002678:5714000:572108757210875721449363Mesorhizobium loti MAFF303099, complete genometransposase6e-1062.8
NC_015976:1064888:108418210841821084601420Sphingobium sp. SYK-6, complete genomeputative transposase for insertion sequence element2e-0961.2
NC_002678:4859111:487641748764174876740324Mesorhizobium loti MAFF303099, complete genometransposase3e-0960.5
NC_010510:388885:407336407336407701366Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeputative transposase6e-0856.2
NC_012724:2202173:220347122034712203872402Burkholderia glumae BGR1 chromosome 1, complete genomeTransposase and inactivated derivatives9e-0855.8
NC_013595:3388000:339619433961943397018825Streptosporangium roseum DSM 43021, complete genometransposase IS4 family protein3e-0753.9
NC_014483:3629282:363666736366673637089423Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein7e-0752.8
NC_007406:2615916:263486626348662635231366Nitrobacter winogradskyi Nb-255, complete genomeISBm1, transposase orfA8e-0752.4
NC_015434:2527412:253712325371232537950828Verrucosispora maris AB-18-032 chromosome, complete genometransposase, IS4 family protein1e-0652
NC_007618:526400:540431540431540859429Brucella melitensis biovar Abortus 2308 chromosome I, completeISBm1, transposase orfA1e-0652
NC_010742:529500:542452542452542880429Brucella abortus S19 chromosome 1, complete sequenceISBm1, transposase orfA1e-0652
NC_014032:249570:266127266127266660534Salinibacter ruber M8 chromosome, complete genometransposase1e-0652
NC_010103:507482:526691526691527119429Brucella canis ATCC 23365 chromosome I, complete sequencehypothetical protein2e-0651.6
NC_004310:508483:528047528047528475429Brucella suis 1330 chromosome I, complete sequenceISBm1, transposase orfA2e-0651.6
NC_010103:507482:521157521157521585429Brucella canis ATCC 23365 chromosome I, complete sequencehypothetical protein2e-0651.6
NC_004310:508483:522514522514522942429Brucella suis 1330 chromosome I, complete sequenceISBm1, transposase orfA2e-0651.6
NC_016797:508414:522445522445522873429Brucella suis VBI22 chromosome I, complete sequenceISBm1, transposase orfA2e-0651.6
NC_016797:508414:527978527978528406429Brucella suis VBI22 chromosome I, complete sequenceISBm1, transposase orfA2e-0651.6
NC_017251:508469:522500522500522928429Brucella suis 1330 chromosome I, complete genomeISBm1, transposase orfA2e-0651.6
NC_017251:508469:528033528033528461429Brucella suis 1330 chromosome I, complete genomeISBm1, transposase orfA2e-0651.6
NC_006932:531000:544136544136544857722Brucella abortus biovar 1 str. 9-941 chromosome I, completeISBm1, transposase orfA1e-0651.6
NC_018524:2246225:225555122555512256390840Nocardiopsis alba ATCC BAA-2165 chromosome, complete genometransposase DDE domain protein2e-0651.2
NC_015656:2484749:249392524939252494791867Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS4 family protein3e-0650.8
NC_014483:1146682:115371711537171154091375Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein3e-0650.8
NC_014483:3629282:363583636358363636210375Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein3e-0650.8
NC_010501:2609567:261825326182532618633381Pseudomonas putida W619, complete genomeISPs1, transposase OrfA2e-0650.8
NC_009720:2945655:296614429661442966542399Xanthobacter autotrophicus Py2, complete genomeISBm1, transposase orfA2e-0650.8
NC_009720:251703:256999256999257397399Xanthobacter autotrophicus Py2, complete genomeISBm1, transposase orfA2e-0650.8
NC_014819:25765:328143281433577764Asticcacaulis excentricus CB 48 plasmid pASTEX02, completehypothetical protein2e-0650.8
NC_010725:4035397:403667440366744037431758Methylobacterium populi BJ001, complete genomeTransposase and inactivated derivatives-like protein4e-0650.4
NC_013119:511500:524456524456525067612Brucella microti CCM 4915 chromosome 1, complete sequenceISBm1, transposase orfA5e-0650.1
NC_012483:729000:751880751880752386507Acidobacterium capsulatum ATCC 51196, complete genomeISAca3, transposase orfA7e-0649.3
NC_012483:656397:668838668838669344507Acidobacterium capsulatum ATCC 51196, complete genomeISAca3, transposase orfA7e-0649.3
NC_016795:1857296:187352318735231873849327Brucella abortus A13334 chromosome 1, complete sequencetransposase-like protein8e-0649.3