Pre_GI: BLASTP Hits

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Query: NC_007951:2233676:2247876 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2247876, End: 2248184, Length: 309

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013446:4182878:418953741895374189947411Comamonas testosteroni CNB-2, complete genomehypothetical protein8e-1682.4
NC_008752:2936933:296358829635882963920333Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein3e-1477.4
NC_008536:9538891:956975395697539570031279Solibacter usitatus Ellin6076, complete genomeplasmid related protein6e-1476.3
NC_009076:3564500:360615336061533606452300Burkholderia pseudomallei 1106a chromosome I, complete sequenceType I restriction-modification system methyltransferase subunit1e-1272
NC_011662:1058794:107540610754061075711306Thauera sp. MZ1T, complete genomehypothetical protein1e-1271.6
NC_004129:5373886:5416895541689554183341440Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-1270.5
NC_008825:2525380:253421425342142534519306Methylibium petroleiphilum PM1, complete genomehypothetical protein3e-1270.5
NC_018691:2254566:226965022696502269934285Alcanivorax dieselolei B5 chromosome, complete genomeType I restriction-modification system methyltransferase subunit6e-1269.7
NC_012691:2614603:264743126474312647739309Tolumonas auensis DSM 9187, complete genomehypothetical protein5e-1269.7
NC_008782:2326439:235830123583012358606306Acidovorax sp. JS42, complete genomehypothetical protein8e-1268.9
NC_010170:4533416:454786845478684548179312Bordetella petrii, complete genomehypothetical protein2e-1167.8
NC_009998:62000:660286602866327300Shewanella baltica OS195 plasmid pS19501, complete sequencehypothetical protein2e-1167.8
NC_015379:2417312:245356224535622453864303Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein7e-1165.9
NC_009656:4527457:4620909462090946223541446Pseudomonas aeruginosa PA7 chromosome, complete genomeO-methyl transferase family protein9e-1165.5
NC_008463:5246954:5295561529556152970121452Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-1065.5
NC_007651:3064530:313870631387063139005300Burkholderia thailandensis E264 chromosome I, complete sequenceplasmid related protein1e-1065.1
NC_011000:1262324:130417313041731304472300Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein2e-1064.7
NC_011000:2732330:277953527795352779834300Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein1e-1064.7
NC_008344:49039:102502102502102813312Nitrosomonas eutropha C91, complete genomehypothetical protein3e-1063.9
NC_019897:3057000:306791730679173068213297Thermobacillus composti KWC4 chromosome, complete genome3e-1063.9
NC_018080:5091772:5140400514040051418451446Pseudomonas aeruginosa DK2 chromosome, complete genomeO-methyl transferase family protein3e-1063.9
NC_010337:1:338103381034079270Heliobacterium modesticaldum Ice1, complete genomehypothetical protein6e-1062.8
NC_007005:1636875:1652193165219316536441452Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein7e-1062.8
NC_012918:928903:933963933963934268306Geobacter sp. M21 chromosome, complete genomehypothetical protein3e-0960.5
NC_013890:191616:201482201482201799318Dehalococcoides sp. GT chromosome, complete genomehypothetical protein9e-0958.9
NC_009455:173374:192130192130192447318Dehalococcoides sp. BAV1 chromosome, complete genomehypothetical protein1e-0858.5
NC_011035:829945:857256857256857597342Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein2e-0858.2
NC_008542:197500:221226221226221519294Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceplasmid related protein3e-0857
NC_014314:1148000:116335311633531163670318Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein4e-0856.6
NC_015381:1588742:160194616019461602272327Burkholderia gladioli BSR3 chromosome 1, complete sequencetype I restriction-modification system methyltransferase subunit9e-0855.8
NC_013890:53538:777497774978066318Dehalococcoides sp. GT chromosome, complete genomehypothetical protein1e-0755.1
NC_008148:1859888:186253318625331862802270Rubrobacter xylanophilus DSM 9941, complete genomeplasmid related protein3e-0753.9
NC_011000:1262324:130382113038211304171351Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein4e-0650.1