Pre_GI: BLASTP Hits

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Query: NC_007951:2233676:2237547 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2237547, End: 2237780, Length: 234

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010801:550270:590298590298591020723Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu21 transposase7e-28122
NC_010087:319063:333829333829334560732Burkholderia multivorans ATCC 17616 chromosome 3, completeIntegrase catalytic region9e-28122
NC_007973:1785985:179480517948051795596792Ralstonia metallidurans CH34 chromosome 1, complete sequenceTransposase and inactivated derivatives-like protein4e-25113
NC_013892:1890500:189768318976831897934252Xenorhabdus bovienii SS-2004 chromosome, complete genome2e-2097.8
NC_014228:4360676:437989443798944380589696Xenorhabdus nematophila ATCC 19061, complete genometransposase4e-2096.7
NC_014228:4408500:442643644264364426972537Xenorhabdus nematophila ATCC 19061, complete genometransposase (fragment)6e-2095.9
NC_014170:57954:751197511975832714Xenorhabdus nematophila ATCC 19061 plasmid XNC1_p, completetransposase7e-1992.4
NC_015583:4879:9987998710685699Novosphingobium sp. PP1Y plasmid Mpl, complete sequenceputative transposase5e-1579.7
NC_014228:2270000:227253322725332272730198Xenorhabdus nematophila ATCC 19061, complete genometransposase (fragment)8e-1475.9
NC_009932:39348:393483934840058711Acaryochloris marina MBIC11017 plasmid pREB7, complete sequenceintegrase, catalytic region4e-1373.6
NC_017168:3977767:401872340187234019052330Yersinia pestis A1122 chromosome, complete genomehypothetical protein7e-1372.8
NC_007777:4954306:496863249686324969345714Frankia sp. CcI3, complete genomeputative transposase4e-1270.1
NC_007777:4892150:489215048921504892860711Frankia sp. CcI3, complete genomeTransposase and inactivated derivatives-like5e-1269.7
NC_008536:9538891:956638295663829567095714Solibacter usitatus Ellin6076, complete genomeIntegrase, catalytic region9e-1268.9
NC_003384:109036:119023119023119787765Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative transposase1e-1168.6
NC_014836:2919508:743274328196765Desulfurispirillum indicum S5 chromosome, complete genomeintegrase catalytic subunit1e-1168.6
NC_009656:5475540:549761654976165498380765Pseudomonas aeruginosa PA7 chromosome, complete genometransposase1e-1168.6
NC_009656:5505413:551172155117215512485765Pseudomonas aeruginosa PA7 chromosome, complete genometransposase1e-1168.6
NC_014006:1862000:188119218811921881986795Sphingobium japonicum UT26S chromosome 1, complete genometransposase of IS61001e-1168.6
NC_016591:202342:217679217679218479801Burkholderia sp. YI23 plasmid byi_2p, complete sequencetransposase for insertion sequence IS61001e-1168.6
NC_008536:9538891:954556495455649546277714Solibacter usitatus Ellin6076, complete genomeIntegrase, catalytic region2e-1167.8
NC_009921:4035225:403851940385194039307789Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-1167.8
NC_009342:589741:612069612069612779711Corynebacterium glutamicum R chromosome, complete genomehypothetical protein2e-1167.4
NC_017162:1228723:125025512502551250971717Acinetobacter baumannii 1656-2 chromosome, complete genometnpA4e-1167
NC_009651:19909:282452824528961717Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,putative transposase3e-1167
NC_009651:19909:396753967540391717Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,transposase3e-1167
NC_017387:247462:257156257156257872717Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometransposase of IS15DI, IS6 family3e-1167
NC_017387:247462:259555259555260271717Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometransposase of IS15DI, IS6 family3e-1167
NC_017387:247462:270227270227270943717Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometransposase of IS15DI, IS6 family3e-1167
NC_017387:247462:281061281061281777717Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometransposase of IS15DI, IS6 family3e-1167
NC_017162:1228723:124837112483711249087717Acinetobacter baumannii 1656-2 chromosome, complete genometnpA4e-1167
NC_017162:1228723:123657812365781237294717Acinetobacter baumannii 1656-2 chromosome, complete genometnpA4e-1167
NC_009838:81913:878018780188517717Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequencehypothetical protein4e-1167
NC_010545:1781393:179124217912421791958717Corynebacterium urealyticum DSM 7109, complete genometransposase for insertion sequence4e-1167
NC_009651:19909:231212312123837717Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,hypothetical protein4e-1167
NC_010545:1781393:179305717930571793773717Corynebacterium urealyticum DSM 7109, complete genometransposase for insertion sequence4e-1167
NC_003384:157158:159691159691160407717Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative transposase4e-1167
NC_009140:121107:142094142094142816723Salmonella enterica enterica sv Newport str. SL254, completetransposase InsB4 for insertion sequence IS264e-1167
NC_010410:3606826:362846336284633629185723Acinetobacter baumannii AYE, complete genometransposase of IS15DI, IS6 family4e-1167
NC_006856:26438:344693446935191723Salmonella enterica subsp. enterica serovar Choleraesuis strtransposase4e-1167
NC_007777:4892150:491555949155594916269711Frankia sp. CcI3, complete genomeIntegrase3e-1167
NC_011092:9974:122301223012934705Salmonella enterica subsp. enterica serovar Schwarzengrund strIS26 transposase3e-1167
NC_003384:157158:160707160707161411705Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative transposase3e-1167
NC_011083:1524337:153074615307461531450705Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,IS26 transposase3e-1167
NC_011083:1524337:152433715243371525041705Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,IS26 transposase3e-1167
NC_014107:171170:175911175911176615705Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,putative transposase3e-1167
NC_017171:1331794:134812613481261348830705Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomehypothetical protein3e-1167
NC_017171:1331794:133921613392161339920705Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomehypothetical protein3e-1167
NC_016861:22256:371063710637810705Salmonella enterica subsp. enterica serovar Typhimurium strIS26 transposase3e-1167
NC_013365:92973:115045115045115749705Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeputative IS26 transposase3e-1167
NC_013365:92973:112298112298113002705Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeputative IS26 transposase3e-1167
NC_013365:92973:107103107103107807705Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeputative IS26 transposase3e-1167
NC_013365:92973:105243105243105947705Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeputative IS26 transposase3e-1167
NC_003384:157158:163369163369164073705Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative transposase3e-1167
NC_014107:171170:189635189635190339705Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,putative transposase3e-1167
NC_014107:171170:186960186960187664705Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,putative transposase3e-1167
NC_011092:76993:807658076581469705Salmonella enterica subsp. enterica serovar Schwarzengrund strIS26 transposase3e-1167
NC_011092:76993:829848298483688705Salmonella enterica subsp. enterica serovar Schwarzengrund strIS26 transposase3e-1167
NC_011586:268927:303673303673304377705Acinetobacter baumannii AB0057 chromosome, complete genometransposase InsB3 for insertion sequence IS263e-1167
NC_011586:268927:310321310321311025705Acinetobacter baumannii AB0057 chromosome, complete genometransposase InsB3 for insertion sequence IS263e-1167
NC_011887:110618:114134114134114832699Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete4e-1166.6
NC_007777:4892150:491402849140284914738711Frankia sp. CcI3, complete genomeIntegrase4e-1166.6
NC_011751:4992500:499970949997095000431723Escherichia coli UMN026 chromosome, complete genometransposase, IS264e-1166.6
NC_006856:26438:293672936730089723Salmonella enterica subsp. enterica serovar Choleraesuis strTnpA4e-1166.6
NC_011751:4992500:500408050040805004802723Escherichia coli UMN026 chromosome, complete genometransposase, IS264e-1166.6
NC_011751:4992500:499588549958854996607723Escherichia coli UMN026 chromosome, complete genometransposase, IS264e-1166.6
NC_010410:3606826:362621436262143626936723Acinetobacter baumannii AYE, complete genometransposase of IS26, IS6 family4e-1166.6
NC_010410:3606826:363284436328443633566723Acinetobacter baumannii AYE, complete genometransposase of IS26, IS6 family4e-1166.6
NC_009140:121107:141327141327142049723Salmonella enterica enterica sv Newport str. SL254, completetransposase InsB3 for insertion sequence IS264e-1166.6
NC_016846:24500:404824048241204723Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,hypothetical protein4e-1166.6
NC_009467:117812:120083120083120739657Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequencetransposase6e-1166.2
NC_010511:7400255:741073674107367411488753Methylobacterium sp. 4-46 chromosome, complete genomeputative insertion sequence transposase-like protein6e-1166.2
NC_011586:268927:308072308072308776705Acinetobacter baumannii AB0057 chromosome, complete genometransposase S268e-1165.9
NC_010511:4313769:433179643317964332479684Methylobacterium sp. 4-46 chromosome, complete genomeputative insertion sequence transposase-like protein7e-1165.9
NC_015673:525638:533833533833534543711Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element7e-1165.9
NC_009649:16907:334063340634122717Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,transposase2e-1064.7
NC_010511:2079744:209451720945172095269753Methylobacterium sp. 4-46 chromosome, complete genomeputative insertion sequence transposase-like protein2e-1064.7
NC_010511:2079744:210792721079272108667741Methylobacterium sp. 4-46 chromosome, complete genomeputative insertion sequence transposase-like protein6e-1062.8
NC_016791:3851454:385627138562713856555285Clostridium sp. BNL1100 chromosome, complete genome6e-1062.8
NC_010511:2079744:211321321132132113965753Methylobacterium sp. 4-46 chromosome, complete genomeputative transposase6e-1062.8
NC_010830:1124500:114271511427151143422708Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein9e-1062.4
NC_004369:41236:556125561255791180Corynebacterium efficiens YS-314, complete genomeputative transposase7e-1062.4
NC_010581:2943913:295008029500802950319240Beijerinckia indica subsp. indica ATCC 9039, complete genomeputative insertion sequence transposase-like protein1e-0962
NC_011894:5056901:510654151065415107293753Methylobacterium nodulans ORS 2060, complete genomehypothetical protein1e-0961.6
NC_011892:352652:368307368307369266960Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeTransposase and inactivated derivatives-like protein2e-0961.6
NC_009921:3384116:338857233885723389213642Frankia sp. EAN1pec, complete genomeIntegrase catalytic region2e-0961.2
NC_020911:18500:302353023530957723Octadecabacter antarcticus 307, complete genomeIS6-family transposase2e-0960.8
NC_009649:16907:243622436225024663Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,transposase2e-0960.8
NC_009832:4564752:458539445853944585540147Serratia proteamaculans 568, complete genome3e-0960.5
NC_010742:1794000:179675317967531797628876Brucella abortus S19 chromosome 1, complete sequenceTransposase5e-0959.7
NC_010103:1777000:177977617797761780654879Brucella canis ATCC 23365 chromosome I, complete sequenceTransposase and inactivated derivatives-like protein5e-0959.7
NC_010167:1287000:128970812897081290586879Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein5e-0959.7
NC_010180:213825:217530217530218237708Bacillus weihenstephanensis KBAB4 plasmid pBWB401, completeIntegrase catalytic region7e-0959.3
NC_007618:1792500:179578117957811796467687Brucella melitensis biovar Abortus 2308 chromosome I, completetransposase, putative7e-0959.3
NC_004310:1777721:178179317817931782479687Brucella suis 1330 chromosome I, complete sequencetransposase, putative7e-0959.3
NC_006932:1795500:179865317986531799339687Brucella abortus biovar 1 str. 9-941 chromosome I, completeIS2020 transposase7e-0959.3
NC_010167:1287000:129398512939851294671687Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein7e-0959.3
NC_010103:1777000:178405317840531784739687Brucella canis ATCC 23365 chromosome I, complete sequenceTransposase and inactivated derivatives-like protein7e-0959.3
NC_007618:1792500:179986617998661800552687Brucella melitensis biovar Abortus 2308 chromosome I, completetransposase, putative7e-0959.3
NC_004310:1777721:178587817858781786564687Brucella suis 1330 chromosome I, complete sequencetransposase, putative7e-0959.3
NC_010742:1794000:180102618010261801712687Brucella abortus S19 chromosome 1, complete sequencetransposase, putative7e-0959.3
NC_006932:1795500:180273818027381803424687Brucella abortus biovar 1 str. 9-941 chromosome I, completeIS2020 transposase7e-0959.3
NC_003317:190975:207366207366208187822Brucella melitensis 16M chromosome I, complete sequenceTRANSPOSASE7e-0959.3
NC_009956:88354:105261105261105971711Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequencetransposase, putative8e-0958.9
NC_016642:4517478:453469145346914535395705Pseudovibrio sp. FO-BEG1 chromosome, complete genometransposase1e-0858.5
NC_009921:3854969:386864338686433869281639Frankia sp. EAN1pec, complete genomeIntegrase catalytic region1e-0858.5
NC_015673:289578:299033299033299692660Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element1e-0858.5
NC_019973:5838000:586029658602965860589294Mesorhizobium australicum WSM2073, complete genome2e-0858.2
NC_015857:1809500:181253018125301813240711Brucella pinnipedialis B2/94 chromosome chromosome 1, completeIS2020 family transposase2e-0857.8
NC_015857:1809500:181663918166391817349711Brucella pinnipedialis B2/94 chromosome chromosome 1, completeIS2020 family transposase2e-0857.8
NC_015675:6464000:648562764856276486300674Mesorhizobium opportunistum WSM2075 chromosome, complete genome2e-0857.4
NC_014923:5909000:593095659309565931629674Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete2e-0857.4
NC_013892:202778:221233221233221403171Xenorhabdus bovienii SS-2004 chromosome, complete genometransposase6e-0856.2
NC_018605:846500:872070872070872777708Cardinium endosymbiont cPer1 of Encarsia pergandiella, completeTransposase for insertion sequence-like element IS431mec1e-0755.1
NC_018606:40000:409514095141658708Cardinium endosymbiont cPer1 of Encarsia pergandiella plasmidTransposase for insertion sequence-like element IS431mec3e-0753.9
NC_017201:139000:155666155666156373708Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26,insertion sequence IS240 protein6e-0752.8
NC_012725:97681:107730107730108458729Burkholderia glumae BGR1 plasmid bglu_4p, complete sequenceIS element transposase2e-0651.6
NC_012725:97681:116778116778117506729Burkholderia glumae BGR1 plasmid bglu_4p, complete sequenceIS element transposase2e-0651.6
NC_011887:72364:781827818278886705Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeputative insertion sequence transposase-like protein2e-0651.2
NC_008536:9538891:955050495505049550842339Solibacter usitatus Ellin6076, complete genome2e-0651.2
NC_008278:2732890:274905227490522749252201Frankia alni ACN14a, complete genomePutative transposase3e-0650.8
NC_009078:2718741:272330827233082724036729Burkholderia pseudomallei 1106a chromosome II, complete sequenceISRh1 transposase-like protein2e-0650.8
NC_007435:1446916:145148314514831452211729Burkholderia pseudomallei 1710b chromosome II, complete sequenceputative IS element transposase2e-0650.8
NC_009075:1638789:164743516474351648163729Burkholderia pseudomallei 668 chromosome II, complete sequenceIS6 family transposase2e-0650.8
NC_006351:2759708:276240927624092763137729Burkholderia pseudomallei K96243 chromosome 2, complete sequenceIS element transposase2e-0650.8
NC_009075:1638789:165581516558151656543729Burkholderia pseudomallei 668 chromosome II, complete sequenceIS6 family transposase2e-0650.8
NC_009075:1638789:165489416548941655622729Burkholderia pseudomallei 668 chromosome II, complete sequenceIS6 family transposase2e-0650.8
NC_006351:2759708:276565027656502766378729Burkholderia pseudomallei K96243 chromosome 2, complete sequenceIS element transposase2e-0650.8
NC_004722:5027762:502926850292685029681414Bacillus cereus ATCC 14579, complete genomeTransposase6e-0649.7
NC_010581:2999002:299996029999603000594635Beijerinckia indica subsp. indica ATCC 9039, complete genome8e-0648.9