Pre_GI: BLASTP Hits

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Query: NC_007951:2045830:2058616 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2058616, End: 2059044, Length: 429

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012721:2556160:260034026003402600747408Burkholderia glumae BGR1 chromosome 2, complete genomePutative small heat shock protein, Hsp20 family protein5e-31132
NC_017075:2293209:229746222974622297845384Rubrivivax gelatinosus IL144, complete genomeputative small heat-shock protein1e-23108
NC_015259:673662:689220689220689618399Polymorphum gilvum SL003B-26A1 chromosome, complete genomeHeat shock protein Hsp202e-1787.8
NC_008048:389645:402828402828403220393Sphingopyxis alaskensis RB2256, complete genomeheat shock protein Hsp205e-1683.2
NC_009485:8187321:819274081927408193123384Bradyrhizobium sp. BTAi1 chromosome, complete genomeHsp20 family heat-shock protein4e-1580.1
NC_011769:3712497:373189737318973732328432Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeheat shock protein Hsp207e-1579.3
NC_010814:155834:171644171644172042399Geobacter lovleyi SZ, complete genomeheat shock protein Hsp202e-1271.2
NC_002939:2617037:264308126430812643479399Geobacter sulfurreducens PCA, complete genomeheat shock protein, Hsp20 family3e-1270.5
NC_015436:1287873:128787312878731288319447Spirochaeta coccoides DSM 17374 chromosome, complete genomeheat shock protein Hsp209e-1165.5
NC_008048:389645:403230403230403655426Sphingopyxis alaskensis RB2256, complete genomeheat shock protein Hsp203e-1063.9
NC_015387:155728:157211157211157627417Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeheat shock protein Hsp203e-1063.9
NC_009455:820821:825516825516826004489Dehalococcoides sp. BAV1 chromosome, complete genomeheat shock protein Hsp201e-0962
NC_020387:796253:799101799101799589489Dehalococcoides mccartyi BTF08, complete genomeheat shock protein, Hsp20 family1e-0962
NC_008699:4443000:447477544747754475206432Nocardioides sp. JS614, complete genomeheat shock protein Hsp201e-0962
NC_016947:70210:935189351893958441Mycobacterium intracellulare MOTT-02 chromosome, complete genomeheat shock protein3e-0960.8
NC_002932:1851070:186817518681751868603429Chlorobium tepidum TLS, complete genomeheat shock protein, Hsp20 family4e-0960.1
NC_008536:2961460:297561329756132975930318Solibacter usitatus Ellin6076, complete genomeheat shock protein Hsp204e-0960.1
NC_011901:3072817:309758730975873098018432Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeHSP20 family protein7e-0959.3
NC_015259:673662:689633689633690058426Polymorphum gilvum SL003B-26A1 chromosome, complete genomeHeat shock protein Hsp208e-0959.3
NC_015277:6213304:154715471984438Sphingobacterium sp. 21 chromosome, complete genomeheat shock protein Hsp202e-0858.2
NC_006087:2326143:234282523428252343247423Leifsonia xyli subsp. xyli str. CTCB07, complete genome18 Kd antigen-like protein2e-0857.8
NC_006087:765081:780192780192780614423Leifsonia xyli subsp. xyli str. CTCB07, complete genome18 Kd antigen-like protein2e-0857.8
NC_015152:3100312:310180731018073102232426Spirochaeta sp. Buddy chromosome, complete genomeheat shock protein Hsp202e-0857.4
NC_016609:2730449:274641327464132746847435Niastella koreensis GR20-10 chromosome, complete genomeheat shock protein Hsp203e-0857.4
NC_015671:1678088:169348216934821693913432Cellvibrio gilvus ATCC 13127 chromosome, complete genomeheat shock protein Hsp203e-0857
NC_015681:102000:119757119757120197441Thermodesulfatator indicus DSM 15286 chromosome, complete genomeheat shock protein Hsp205e-0856.6
NC_007347:1239982:123998212399821240404423Ralstonia eutropha JMP134 chromosome 1, complete sequenceHeat shock protein Hsp206e-0856.2
NC_007333:1743890:175862317586231759084462Thermobifida fusca YX, complete genomeheat shock protein, class I9e-0855.8
NC_014391:6749156:675189467518946752334441Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeheat shock protein hsp207e-0855.8
NC_011001:302500:330064330064330498435Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative heat shock protein1e-0755.1
NC_015312:3675148:373256637325663733039474Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeheat shock protein Hsp202e-0754.3
NC_016616:1534983:155981315598131560271459Dechlorosoma suillum PS chromosome, complete genomemolecular chaperone3e-0753.9
NC_015914:2230076:224819622481962248651456Cyclobacterium marinum DSM 745 chromosome, complete genomeheat shock protein Hsp204e-0753.5
NC_010625:1513436:153090415309041531377474Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceheat shock protein Hsp205e-0753.1
NC_013947:3785332:378891437889143789348435Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeheat shock protein Hsp205e-0753.1
NC_016114:7282882:729710972971097297540432Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeheat shock protein Hsp206e-0752.8
NC_014315:3004125:300614430061443006590447Nitrosococcus watsoni C-113 chromosome, complete genomeheat shock protein Hsp209e-0752.4
NC_012803:1753138:176953817695381770029492Micrococcus luteus NCTC 2665, complete genomeheat shock protein Hsp201e-0652
NC_013929:9450747:945599294559929456453462Streptomyces scabiei 87.22 chromosome, complete genomeheat shock protein1e-0652
NC_014962:3440826:344743634474363447903468Isosphaera pallida ATCC 43644 chromosome, complete genomeheat shock protein Hsp201e-0651.6
NC_010814:155834:171161171161171610450Geobacter lovleyi SZ, complete genomeheat shock protein Hsp202e-0651.2
NC_007333:1411050:141634214163421417124783Thermobifida fusca YX, complete genomesimilar to Molecular chaperone (small heat shock protein)3e-0650.8
NC_013960:2166367:218788321878832188398516Nitrosococcus halophilus Nc4 chromosome, complete genomeheat shock protein Hsp203e-0650.8
NC_015687:3907000:392108239210823921537456Clostridium acetobutylicum DSM 1731 chromosome, complete genomemolecular chaperone (small heat shock protein), HSP182e-0650.8
NC_003030:3902000:391950039195003919955456Clostridium acetobutylicum ATCC 824, complete genomeMolecular chaperone (small heat shock protein), HSP182e-0650.8
NC_017295:3901773:391885139188513919306456Clostridium acetobutylicum EA 2018 chromosome, complete genomeMolecular chaperone (small heat shock protein), HSP182e-0650.8
NC_013921:2293411:229341122934112293848438Thermoanaerobacter italicus Ab9 chromosome, complete genomeheat shock protein Hsp203e-0650.4
NC_016147:1961000:196113219611321961533402Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeheat shock protein, Hsp20 family4e-0650.1
NC_011206:1293880:130048813004881300934447Acidithiobacillus ferrooxidans ATCC 53993, complete genomeheat shock protein Hsp204e-0650.1
NC_011761:1412420:141867014186701419116447Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeheat shock protein, Hsp20 family4e-0650.1
NC_014391:6749156:674915667491566749626471Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeheat shock protein hsp204e-0650.1
NC_010725:3917369:392533939253393925896558Methylobacterium populi BJ001, complete genomeheat shock protein Hsp205e-0649.7
NC_010725:3961981:397180439718043972361558Methylobacterium populi BJ001, complete genomeheat shock protein Hsp205e-0649.7
NC_012988:1459961:150190315019031502460558Methylobacterium extorquens DM4, complete genomemolecular chaperone, heat shock Hsp20 family6e-0649.7
NC_011884:1998559:202029620202962020838543Cyanothece sp. PCC 7425, complete genomeheat shock protein Hsp208e-0649.3