Pre_GI: BLASTP Hits

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Query: NC_007951:2045830:2051475 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2051475, End: 2051975, Length: 501

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008781:1507384:153205115320511532587537Polaromonas naphthalenivorans CJ2, complete genometranscriptional regulator, MarR family3e-0961.2
NC_015677:3685452:368943436894343689940507Ramlibacter tataouinensis TTB310 chromosome, complete genometranscriptional regulator OhrR8e-0959.7
NC_007712:3511500:352399535239953524432438Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator1e-0755.8
NC_009633:2137999:215730021573002157731432Alkaliphilus metalliredigens QYMF chromosome, complete genomeMarR family transcriptional regulator3e-0754.7
NC_008711:3701635:370749737074973707949453Arthrobacter aurescens TC1, complete genomeputative transcriptional regulator, MarR family3e-0754.3
NC_009668:594500:621228621228621686459Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceMarR family transcriptional regulator5e-0753.9
NC_004193:3578710:359614835961483596582435Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator4e-0650.8
NC_015172:3095781:311222231122223112677456Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeregulatory protein MarR4e-0650.8
NC_017188:461177:469032469032469469438Bacillus amyloliquefaciens TA208 chromosome, complete genomeputative transcriptional regulato4e-0650.8
NC_017190:466236:473765473765474202438Bacillus amyloliquefaciens LL3 chromosome, complete genometranscriptional regulator4e-0650.8
NC_017191:467207:475062475062475499438Bacillus amyloliquefaciens XH7 chromosome, complete genometranscriptional regulator4e-0650.8
NC_013209:2384826:238985123898512390342492Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator MarR5e-0650.4
NC_017100:2383487:239105823910582391549492Acetobacter pasteurianus IFO 3283-03, complete genometranscriptional regulator MarR5e-0650.4
NC_017108:2383370:238839523883952388886492Acetobacter pasteurianus IFO 3283-12, complete genometranscriptional regulator MarR5e-0650.4
NC_017111:2383388:238841323884132388904492Acetobacter pasteurianus IFO 3283-32, complete genometranscriptional regulator MarR5e-0650.4
NC_017121:2383375:238840023884002388891492Acetobacter pasteurianus IFO 3283-07, complete genometranscriptional regulator MarR5e-0650.4
NC_017125:2383467:239103823910382391529492Acetobacter pasteurianus IFO 3283-22, complete genometranscriptional regulator MarR5e-0650.4
NC_017146:2383509:239108023910802391571492Acetobacter pasteurianus IFO 3283-26, complete genometranscriptional regulator MarR5e-0650.4
NC_017150:2290681:229759722975972298088492Acetobacter pasteurianus IFO 3283-01-42C, complete genometranscriptional regulator MarR5e-0650.4
NC_003296:262118:279370279370279834465Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN5e-0650.4
NC_010572:4585500:459085645908564591413558Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative MarR-family transcriptional regulator6e-0650.1
NC_013171:1808000:182696718269671827392426Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, TrmB6e-0650.1
NC_019673:6778401:678723067872306787748519Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein8e-0649.7
NC_010611:679862:681926681926682363438Acinetobacter baumannii ACICU, complete genomeTranscriptional regulator9e-0649.7