Pre_GI: BLASTP Hits

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Query: NC_007951:1971584:1985835 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1985835, End: 1987328, Length: 1494

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007951:4741620:4756244475624447577371494Burkholderia xenovorans LB400 chromosome 1, complete sequenceputative transposase with integrase domain0932
NC_007951:2904644:2940441294044129419341494Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase0812
NC_016590:1183470:1188216118821611897151500Burkholderia sp. YI23 chromosome 3, complete sequenceintegrase catalytic subunit0723
NC_016626:1781956:1785372178537217868711500Burkholderia sp. YI23 plasmid byi_1p, complete sequencetransposase, IS21 family0697
NC_007925:1085500:1100823110082311023161494Rhodopseudomonas palustris BisB18, complete genomeIntegrase, catalytic region4e-135481
NC_012791:2832001:2846754284675428482471494Variovorax paradoxus S110 chromosome 1, complete genometransposase1e-129463
NC_004463:1872537:1871026187102618725761551Bradyrhizobium japonicum USDA 110, complete genomeputative transposase7e-126451
NC_004463:5540924:5543986554398655455361551Bradyrhizobium japonicum USDA 110, complete genomeputative transposase7e-126451
NC_006513:148950:1583071583071598031497Azoarcus sp. EbN1, complete genometransposase4e-125448
NC_011206:2019577:2031455203145520329391485Acidithiobacillus ferrooxidans ATCC 53993, complete genomeIntegrase catalytic region2e-119429
NC_015186:2197236:2198803219880322003051503Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element2e-116419
NC_016585:1004000:1024581102458110260561476Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceTransposase of ISAli13, IS21 family, ORFA2e-115416
NC_007951:1928906:1951349195134919528631515Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase integrase, IstA4e-114412
NC_007951:2087385:2106075210607521075891515Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase4e-114412
NC_007952:3238241:3239089323908932406031515Burkholderia xenovorans LB400 chromosome 2, complete sequenceIntegrase, catalytic region4e-114412
NC_007951:769500:7943587943587958721515Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein4e-114412
NC_007951:2206263:2220092222009222216061515Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase, R6 like4e-114412
NC_016626:1669477:1669477166947716709581482Burkholderia sp. YI23 plasmid byi_1p, complete sequenceISBmu7a transposase3e-114412
NC_009467:117812:1334651334651349941530Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequenceintegrase catalytic subunit8e-114410
NC_008686:405159:4312344312344327511518Paracoccus denitrificans PD1222 chromosome 1, complete sequenceIntegrase, catalytic region7e-113407
NC_003047:3360000:3395946339594633974601515Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSPOSASE NUMBER 1 FOR INSERTION SEQUENCE ISRM271e-112407
NC_010086:1816378:1849654184965418511681515Burkholderia multivorans ATCC 17616 chromosome 2, completeIntegrase catalytic region4e-112405
NC_010087:376918:4234224234224249361515Burkholderia multivorans ATCC 17616 chromosome 3, completeIntegrase catalytic region4e-112405
NC_015590:145353:1473581473581488661509Sinorhizobium meliloti AK83 chromosome 1, complete sequenceintegrase catalytic subunit8e-112404
NC_017325:1897500:1911800191180019133081509Sinorhizobium meliloti SM11 chromosome, complete genometransposase7e-112404
NC_010801:481601:4999224999225014061485Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu7a transposase7e-110397
NC_010805:575709:6241366241366256201485Burkholderia multivorans ATCC 17616 chromosome 2, completeISBmu7b transposase7e-110397
NC_008750:1253354:1265548126554812670531506Shewanella sp. W3-18-1, complete genomeIntegrase, catalytic region2e-106386
NC_004431:1401681:1403622140362214051211500Escherichia coli CFT073, complete genomehypothetical protein1e-101370
NC_004431:3409389:3445858344585834473571500Escherichia coli CFT073, complete genomehypothetical protein1e-101370
NC_007941:11319:2851228512300111500Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein2e-100366
NC_009931:117904:1359021359021376381737Acaryochloris marina MBIC11017 plasmid pREB6, complete sequencetransposase, putative3e-95349
NC_011884:1998559:2011735201173520132851551Cyanothece sp. PCC 7425, complete genome4e-90332
NC_011884:4366831:4385541438554143870911551Cyanothece sp. PCC 7425, complete genome4e-90332
NC_011884:2921618:2939048293904829405981551Cyanothece sp. PCC 7425, complete genome4e-90332
NC_011884:2194767:2208132220813222096821551Cyanothece sp. PCC 7425, complete genome4e-90332
NC_009052:4168776:4168776416877641702781503Shewanella baltica OS155, complete genomeIntegrase, catalytic region2e-89330
NC_009052:3381943:3381943338194333834451503Shewanella baltica OS155, complete genomeIntegrase, catalytic region7e-89328
NC_009052:1899954:1916952191695219184541503Shewanella baltica OS155, complete genomeIntegrase, catalytic region5e-89328
NC_009052:4437649:4448857444885744503591503Shewanella baltica OS155, complete genomeIntegrase, catalytic region5e-89328
NC_009052:1211989:1226697122669712281991503Shewanella baltica OS155, complete genomeIntegrase, catalytic region5e-89328
NC_009052:3381943:3384965338496533864671503Shewanella baltica OS155, complete genomeIntegrase, catalytic region5e-89328
NC_009052:2107692:2119764211976421212661503Shewanella baltica OS155, complete genomeIntegrase, catalytic region5e-89328
NC_009052:4335754:4339397433939743408991503Shewanella baltica OS155, complete genomeIntegrase, catalytic region5e-89328
NC_008740:1484531:1504870150487015063361467Marinobacter aquaeolei VT8, complete genomeIntegrase, catalytic region2e-87323
NC_014973:3290545:3305576330557633070631488Geobacter sp. M18 chromosome, complete genomeintegrase catalytic subunit1e-84313
NC_009483:66502:7784577845792931449Geobacter uraniireducens Rf4 chromosome, complete genomeintegrase catalytic subunit3e-84312
NC_002678:4859111:487688148768814877831951Mesorhizobium loti MAFF303099, complete genometransposase3e-77289
NC_004431:1166568:116711211671121167843732Escherichia coli CFT073, complete genome1e-49197
NC_008253:3122148:314004131400413140535495Escherichia coli 536, complete genomehypothetical protein7e-32138
NC_002678:4859111:487782248778224878388567Mesorhizobium loti MAFF303099, complete genometransposase1e-28128
NC_017249:9198000:920239192023919202693303Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-1996.3
NC_004431:1166568:116656811665681167122555Escherichia coli CFT073, complete genome3e-1790.1
NC_008541:472643:4841864841864859401755Arthrobacter sp. FB24 chromosome 1, complete sequenceTransposase and inactivated derivatives-like protein5e-1272.8
NC_008253:3122148:313966431396643139888225Escherichia coli 536, complete genomehypothetical protein3e-1170.5
NC_015660:1918307:1923815192381519253441530Geobacillus thermoglucosidasius C56-YS93 chromosome, completeintegrase catalytic subunit7e-0652.8
NC_015660:3643370:3658490365849036600191530Geobacillus thermoglucosidasius C56-YS93 chromosome, completeintegrase catalytic subunit6e-0652.8
NC_015660:487506:5024945024945040231530Geobacillus thermoglucosidasius C56-YS93 chromosome, completeintegrase catalytic subunit6e-0652.8
NC_015660:487506:5157405157405172691530Geobacillus thermoglucosidasius C56-YS93 chromosome, completeintegrase catalytic subunit6e-0652.8
NC_014650:2969866:2976511297651129780401530Geobacillus sp. Y4.1MC1 chromosome, complete genomeIntegrase catalytic subunit6e-0652.8
NC_014650:304441:3238163238163253451530Geobacillus sp. Y4.1MC1 chromosome, complete genomeIntegrase catalytic subunit6e-0652.8
NC_014650:3438466:3455059345505934565881530Geobacillus sp. Y4.1MC1 chromosome, complete genomeIntegrase catalytic subunit6e-0652.8
NC_014650:3589604:3607771360777136093001530Geobacillus sp. Y4.1MC1 chromosome, complete genomeIntegrase catalytic subunit6e-0652.8
NC_017249:9198000:9200528920052892017601233Bradyrhizobium japonicum USDA 6, complete genometransposase7e-0652.4
NC_015660:296488:3301203301203316491530Geobacillus thermoglucosidasius C56-YS93 chromosome, completeintegrase catalytic subunit7e-0652.4
NC_015660:3518931:3519728351972835212571530Geobacillus thermoglucosidasius C56-YS93 chromosome, completeintegrase catalytic subunit7e-0652.4