Pre_GI: BLASTP Hits

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Query: NC_007951:1768236:1788984 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1788984, End: 1789553, Length: 570

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014722:1647978:1668638166863816755766939Burkholderia rhizoxinica HKI 454, complete genomeHemagglutinin-like protein3e-50197
NC_014722:467287:4767974767974781971401Burkholderia rhizoxinica HKI 454, complete genomeHemolysin1e-49195
NC_010625:229478:2294782294782378268349Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencefilamentous haemagglutinin family outer membrane protein1e-32139
NC_014311:263963:26396326396327412310161Ralstonia solanacearum PSI07 chromosome, complete genomeadhesin/hemolysin, Adhesin HecA 20-residue repeat x2 domain1e-23109
NC_017047:2260118:22601182260118227138811271Rahnella aquatilis HX2 chromosome, complete genomefilamentous hemagglutinin family outer membrane protein5e-0857.4
NC_009255:763157:76315776315777369810542Burkholderia vietnamiensis G4 chromosome 2, complete sequencefilamentous hemagglutinin outer membrane protein5e-0650.8