Pre_GI: BLASTP Hits

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Query: NC_007951:1042291:1064836 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1064836, End: 1065426, Length: 591

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012969:142000:161822161822162418597Methylovorus glucosetrophus SIP3-4 chromosome, complete genomealpha-ribazole phosphatase3e-23108
NC_006347:2861498:286077428607742861520747Bacteroides fragilis YCH46, complete genomephosphoglycerate mutase1e-1893.2
NC_016776:2913966:291990829199082920453546Bacteroides fragilis 638R, complete genomeputative alpha-ribazole-5'-phosphate phosphatase1e-1892.8
NC_008343:61191:749247492475499576Granulibacter bethesdensis CGDNIH1, complete genomealpha-ribazole-5'-phosphate phosphatase1e-1892.8
NC_003228:2929006:293494829349482935493546Bacteroides fragilis NCTC 9343, complete genomeputative alpha-ribazole-5'-phosphate phosphatase6e-1890.5
NC_015520:224136:232085232085232681597Mahella australiensis 50-1 BON chromosome, complete genomephosphoglycerate mutase4e-1684.7
NC_010162:9641549:964233296423329642964633Sorangium cellulosum 'So ce 56', complete genomephosphoglycerate mutase family protein3e-1478.6
NC_016751:1700164:171478017147801715331552Marinitoga piezophila KA3 chromosome, complete genomealpha-ribazole phosphatase1e-1273.2
NC_014654:302000:321570321570322190621Halanaerobium sp. 'sapolanicus' chromosome, complete genomePhosphoglycerate mutase2e-1272.4
NC_015437:1038476:104379310437931044422630Selenomonas sputigena ATCC 35185 chromosome, complete genomePhosphoglycerate mutase6e-1167.4
NC_007481:3167434:318861131886113189225615Pseudoalteromonas haloplanktis TAC125 chromosome I, completeenzymatic protein1e-1066.2
NC_012438:192065:207795207795208415621Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomephosphoglycerate mutase6e-1063.9
NC_012491:1263469:126924912692491269881633Brevibacillus brevis NBRC 100599, complete genomealpha-ribazole phosphatase2e-0962
NC_010506:4951500:495902249590224959669648Shewanella woodyi ATCC 51908, complete genomePhosphoglycerate mutase3e-0961.6
NC_015953:1983821:1996606199660619978471242Streptomyces sp. SirexAA-E chromosome, complete genomephosphoglycerate mutase4e-0961.2
NC_016148:141011:155390155390156040651Thermovirga lienii DSM 17291 chromosome, complete genomephosphoglycerate mutase5e-0960.8
NC_014614:1259236:125863812586381259243606Clostridium sticklandii, complete genomeputative cobalamin biosynthesis phosphoglycerate mutase1e-0859.7
NC_016627:2723678:273140727314072732099693Clostridium clariflavum DSM 19732 chromosome, complete genomefructose-2,6-bisphosphatase2e-0858.9
NC_020409:1956485:196108519610851961690606Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completePhosphoglycerate mutase2e-0858.9
NC_004557:2777291:278442427844242785065642Clostridium tetani E88, complete genomephosphoglycerate mutase4e-0858.2
NC_014483:1376500:138184813818481382654807Paenibacillus polymyxa E681 chromosome, complete genomeFructose-2,6-bisphosphatase5e-0857.4
NC_014622:1514416:151966415196641520416753Paenibacillus polymyxa SC2 chromosome, complete genomephosphoglycerate mutase6e-0857.4
NC_009142:3943829:395628339562833957017735Saccharopolyspora erythraea NRRL 2338, complete genomephosphoglycerate mutase8e-0857
NC_009831:4539952:454590145459014546587687Shewanella sediminis HAW-EB3, complete genomephosphoglycerate mutase2e-0755.5
NC_018012:1789028:180880718088071809400594Thiocystis violascens DSM 198 chromosome, complete genomefructose-2,6-bisphosphatase3e-0754.7
NC_017093:1411532:1415914141591414170231110Actinoplanes missouriensis 431, complete genomeputative bifunctional ribonuclease H/phosphoglycerate mutase6e-0754.3
NC_013209:2782500:280068528006852801380696Acetobacter pasteurianus IFO 3283-01, complete genomephosphoglycerate/bisphosphoglycerate mutase5e-0754.3
NC_017100:2782303:280047728004772801172696Acetobacter pasteurianus IFO 3283-03, complete genomephosphoglycerate/bisphosphoglycerate mutase5e-0754.3
NC_017108:2779303:279781427978142798509696Acetobacter pasteurianus IFO 3283-12, complete genomephosphoglycerate/bisphosphoglycerate mutase5e-0754.3
NC_017111:2779321:279783227978322798527696Acetobacter pasteurianus IFO 3283-32, complete genomephosphoglycerate/bisphosphoglycerate mutase5e-0754.3
NC_017121:2781000:279923427992342799929696Acetobacter pasteurianus IFO 3283-07, complete genomephosphoglycerate/bisphosphoglycerate mutase5e-0754.3
NC_017125:2782283:280045728004572801152696Acetobacter pasteurianus IFO 3283-22, complete genomephosphoglycerate/bisphosphoglycerate mutase5e-0754.3
NC_017146:2782325:280049928004992801194696Acetobacter pasteurianus IFO 3283-26, complete genomephosphoglycerate/bisphosphoglycerate mutase5e-0754.3
NC_017150:2689920:270843127084312709126696Acetobacter pasteurianus IFO 3283-01-42C, complete genomephosphoglycerate/bisphosphoglycerate mutase5e-0754.3
NC_015634:2492771:249465324946532495273621Bacillus coagulans 2-6 chromosome, complete genomephosphoglycerate mutase1e-0653.1
NC_017068:1327025:132878313287831329394612Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative alpha-ribazole phosphatase2e-0652.8
NC_016148:576946:580073580073580726654Thermovirga lienii DSM 17291 chromosome, complete genomephosphoglycerate mutase1e-0652.8
NC_016641:3173250:317888431788843179723840Paenibacillus terrae HPL-003 chromosome, complete genomefructose-2,6-bisphosphatase1e-0652.8
NC_013159:2098500:213388721338872134591705Saccharomonospora viridis DSM 43017, complete genomefructose-2,6-bisphosphatase2e-0652.4
NC_012962:1827000:184449118444911845108618Photorhabdus asymbiotica, complete genomealpha-ribazole-5'-phosphate phosphatase3e-0652
NC_017955:2494640:254403725440372544738702Modestobacter marinus, complete genomephosphoglycerate mutase3e-0651.6
NC_015635:3860570:389086438908643891490627Microlunatus phosphovorus NM-1, complete genomephosphoglycerate mutase family protein3e-0651.6
NC_013850:2846069:286374228637422864374633Klebsiella variicola At-22 chromosome, complete genomePhosphoglycerate mutase5e-0650.8
NC_015656:1830220:183360018336001834328729Frankia symbiont of Datisca glomerata chromosome, complete genomephosphoglycerate mutase5e-0650.8