Pre_GI: BLASTP Hits

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Query: NC_007951:1042291:1044255 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1044255, End: 1045403, Length: 1149

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014722:1467996:1478982147898214801361155Burkholderia rhizoxinica HKI 454, complete genometransposase4e-126451
NC_007908:1252189:1255466125546612566051140Rhodoferax ferrireducens T118, complete genometransposase IS116/IS110/IS9026e-47188
NC_010511:4258000:4295569429556942966691101Methylobacterium sp. 4-46 chromosome, complete genometransposase IS116/IS110/IS902 family protein1e-43177
NC_010125:3067301:3078511307851130795541044Gluconacetobacter diazotrophicus PAl 5, complete genometransposase3e-42172
NC_010125:3067301:3076835307683530778781044Gluconacetobacter diazotrophicus PAl 5, complete genometransposase IS116/IS110/IS902 family protein6e-42171
NC_010125:1538335:1559745155974515607851041Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase7e-41168
NC_015675:6464000:6465753646575364669131161Mesorhizobium opportunistum WSM2075 chromosome, complete genometransposase IS116/IS110/IS902 family protein7e-40164
NC_019973:5838000:5840042584004258412021161Mesorhizobium australicum WSM2073, complete genometransposase7e-40164
NC_014923:5909000:5911082591108259122421161Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completetransposase IS116/IS110/IS902 family protein7e-40164
NC_008686:95326:1190031190031206221620Paracoccus denitrificans PD1222 chromosome 1, complete sequencetransposase IS116/IS110/IS902 family protein2e-39163
NC_011894:4013830:4013830401383040149901161Methylobacterium nodulans ORS 2060, complete genometransposase IS116/IS110/IS902 family protein2e-36153
NC_007964:3036771:3058650305865030598071158Nitrobacter hamburgensis X14, complete genometransposase IS116/IS110/IS9029e-31134
NC_007964:2152000:2170384217038421715411158Nitrobacter hamburgensis X14, complete genometransposase IS116/IS110/IS9029e-31134
NC_007953:504939:5075695075695087201152Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative transposase IS116/IS110/IS9025e-26119
NC_010125:1651687:165168716516871652586900Gluconacetobacter diazotrophicus PAl 5, complete genomeputative tranposase protein3e-2099.8
NC_004463:9087290:909089090908909091855966Bradyrhizobium japonicum USDA 110, complete genomeputative transposase1e-1997.8
NC_015675:6538500:6539793653979365409651173Mesorhizobium opportunistum WSM2075 chromosome, complete genome9e-1994.7
NC_014923:5970182:5985125598512559862881164Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete4e-1892.8
NC_002678:4885790:489150148915014892301801Mesorhizobium loti MAFF303099, complete genometransposase7e-1788.6
NC_014923:5970182:5990318599031859914481131Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete4e-1582.8
NC_016907:1:8002800290361035Gordonia polyisoprenivorans VH2 plasmid p174, complete sequenceputative transposase4e-1479.3
NC_014844:3015738:3022190302219030231911002Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS116/IS110/IS902 family protein7e-1478.6
NC_014844:903877:9130439130439141101068Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS116/IS110/IS902 family protein7e-1478.6
NC_014844:3015738:3027095302709530281621068Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS116/IS110/IS902 family protein7e-1478.6
NC_014844:3469848:3474382347438234754491068Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometransposase IS116/IS110/IS902 family protein7e-1478.6
NC_016907:152500:1668591668591682711413Gordonia polyisoprenivorans VH2 plasmid p174, complete sequenceputative transposase2e-1377.4
NC_008508:2572450:2577596257759625786901095Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,Transposase, IS15333e-1376.3
NC_008510:2605500:2610857261085726119511095Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, IS15331e-1274.7
NC_007517:3151742:315819431581943159192999Geobacter metallireducens GS-15, complete genomeIS111A/IS1328/IS1533/IS116/IS110/IS902 transposase4e-1272.8
NC_008510:3189349:3195862319586231969561095Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, IS15335e-1272.4
NC_008510:3189349:3205651320565132067451095Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, IS15335e-1168.9
NC_015500:78223:9106691066921961131Treponema brennaborense DSM 12168 chromosome, complete genometransposase IS116/IS110/IS902 family protein7e-1168.6
NC_015500:159199:1693661693661704961131Treponema brennaborense DSM 12168 chromosome, complete genometransposase IS116/IS110/IS902 family protein7e-1168.6
NC_011751:3453683:3474872347487234760051134Escherichia coli UMN026 chromosome, complete genometransposase, IS110 family5e-1065.9
NC_007946:4779745:4811641481164148127741134Escherichia coli UTI89, complete genomehypothetical protein6e-1065.5
NC_010805:575709:5824475824475835261080Burkholderia multivorans ATCC 17616 chromosome 2, completeISBmu29 transposase1e-0964.7
NC_009255:1105786:1132044113204411331231080Burkholderia vietnamiensis G4 chromosome 2, complete sequencetransposase IS116/IS110/IS902 family protein1e-0964.7
NC_008510:3189349:3210531321053132117191189Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,2e-0963.5
NC_010658:4257310:4262305426230542634801176Shigella boydii CDC 3083-94, complete genometransposase1e-0861.2
NC_016822:2940000:2941949294194929431241176Shigella sonnei 53G, complete genomeISCps8, transposase1e-0861.2
NC_016822:2940000:2961415296141529625901176Shigella sonnei 53G, complete genomeISCps8, transposase1e-0861.2
NC_016822:4889656:4907649490764949088241176Shigella sonnei 53G, complete genomeISCps8, transposase1e-0861.2
NC_010627:127968:1284341284341295641131Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencetransposase IS116/IS110/IS902 family protein1e-0861.2
NC_007613:4119771:4121697412169741228241128Shigella boydii Sb227, complete genomeputative transposase1e-0860.8
NC_015311:145215:1452151452151462941080Prevotella denticola F0289 chromosome, complete genometransposase, IS116/IS110/IS902 family2e-0757
NC_015500:1337180:1345716134571613468461131Treponema brennaborense DSM 12168 chromosome, complete genometransposase IS116/IS110/IS902 family protein9e-0755.1
NC_011753:2018500:2024849202484920260031155Vibrio splendidus LGP32 chromosome 1, complete genomeTransposase of insertion sequence ISVisp2 ; IS110 family subgroup IS11111e-0654.7
NC_009717:271385:2817592817592828711113Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequencetransposase IS116/IS110/IS902 family protein1e-0654.7
NC_013165:413098:414451414451415236786Slackia heliotrinireducens DSM 20476, complete genometransposase8e-0652