Pre_GI: BLASTP Hits

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Query: NC_007949:9839:22142 Polaromonas sp. JS666 plasmid 1, complete sequence

Start: 22142, End: 23191, Length: 1050

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015731:447411:4474114474114487631353Nitrosomonas sp. Is79A3 chromosome, complete genometype I secretion membrane fusion protein, HlyD family3e-66252
NC_020064:1547524:1574437157443715757681332Serratia marcescens FGI94, complete genometype I secretion membrane fusion protein, HlyD family3e-59229
NC_015567:1660462:1691443169144316927741332Serratia sp. AS9 chromosome, complete genometype I secretion membrane fusion protein, HlyD family2e-58226
NC_015566:1659288:1691431169143116927621332Serratia sp. AS12 chromosome, complete genometype I secretion membrane fusion protein, HlyD family2e-58226
NC_020211:1704500:1733040173304017343711332Serratia marcescens WW4, complete genomeHlyD family type I secretion membrane fusion protein1e-57223
NC_009832:1719149:1748151174815117494821332Serratia proteamaculans 568, complete genometype I secretion membrane fusion protein, HlyD family4e-57221
NC_012912:2426520:2426520242652024278661347Dickeya zeae Ech1591, complete genometype I secretion membrane fusion protein, HlyD family7e-57221
NC_009439:794498:7998497998498011651317Pseudomonas mendocina ymp, complete genomeHlyD family type I secretion membrane fusion protein9e-32137
NC_019973:5601346:5601346560134656026831338Mesorhizobium australicum WSM2073, complete genometype I secretion membrane fusion protein, HlyD family2e-28127
NC_007512:771975:8001618001618013421182Pelodictyon luteolum DSM 273, complete genomemetalloprotease secretion protein2e-28127
NC_013960:2761353:2783986278398627851191134Nitrosococcus halophilus Nc4 chromosome, complete genome1e-28127
NC_011420:365505:3747223747223760831362Rhodospirillum centenum SW, complete genomeHlyD family secretion protein2e-27123
NC_015733:1555476:1599470159947016007951326Pseudomonas putida S16 chromosome, complete genomeHlyD family secretion protein2e-27123
NC_010994:3477000:3493442349344234947821341Rhizobium etli CIAT 652, complete genomeprotein secretion protein, HlyD family1e-26120
NC_002947:1988652:2018723201872320200481326Pseudomonas putida KT2440, complete genomeHlyD family secretion protein2e-26120
NC_014836:223013:2459562459562472571302Desulfurispirillum indicum S5 chromosome, complete genomeHlyD family type I secretion membrane fusion protein1e-25117
NC_008435:3915110:3923991392399139252921302Rhodopseudomonas palustris BisA53, complete genometype I secretion membrane fusion protein, HlyD family9e-26117
NC_014315:1396990:1399906139990614012731368Nitrosococcus watsoni C-113 chromosome, complete genomeHlyD family type I secretion membrane fusion protein3e-25116
NC_005773:1135374:1172090117209011734121323Pseudomonas syringae pv. phaseolicola 1448A, complete genomeHlyD family secretion protein3e-25116
NC_011369:3022235:3036512303651230378191308Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeHlyD family type I secretion membrane fusion protein1e-24114
NC_016616:1861852:1866496186649618679051410Dechlorosoma suillum PS chromosome, complete genomeHlyD family type I secretion membrane fusion protein1e-24114
NC_008435:1131242:1133468113346811348261359Rhodopseudomonas palustris BisA53, complete genometype I secretion membrane fusion protein, HlyD family2e-24113
NC_010511:2775465:2783680278368027849421263Methylobacterium sp. 4-46 chromosome, complete genomeHlyD family type I secretion membrane fusion protein2e-24113
NC_007484:2045500:2058831205883120601981368Nitrosococcus oceani ATCC 19707, complete genomeType I secretion membrane fusion protein, HlyD2e-24113
NC_010511:3674178:3751366375136637526731308Methylobacterium sp. 4-46 chromosome, complete genomeHlyD family type I secretion membrane fusion protein2e-24113
NC_008599:426078:4387734387734400561284Campylobacter fetus subsp. fetus 82-40, complete genomeSapE2e-23110
NC_010511:3674178:3679096367909636804391344Methylobacterium sp. 4-46 chromosome, complete genomeHlyD family type I secretion membrane fusion protein4e-23109
NC_010997:910938:9316689316689329781311Rhizobium etli CIAT 652 plasmid pC, complete sequenceputative toxin secretion protein5e-22105
NC_014006:611592:6249736249736263311359Sphingobium japonicum UT26S chromosome 1, complete genomeHlyD-family secretion protein3e-21102
NC_017326:1122103:1122103112210311235931491Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequencetype I secretion membrane fusion protein8e-21101
NC_015596:1592500:1594304159430415957941491Sinorhizobium meliloti AK83 chromosome 2, complete sequencetype I secretion membrane fusion protein HlyD family8e-21101
NC_014834:2206119:2230989223098922323561368Rhodopseudomonas palustris DX-1 chromosome, complete genomeHlyD family type I secretion membrane fusion protein5e-2099
NC_008391:404388:4116534116534128791227Burkholderia cepacia AMMD chromosome 2, complete sequencetype I secretion membrane fusion protein, HlyD family2e-1893.2
NC_004463:8401060:8417280841728084186411362Bradyrhizobium japonicum USDA 110, complete genomeHlyD family secretion protein3e-1789.7
NC_009076:2027478:2045412204541220468211410Burkholderia pseudomallei 1106a chromosome I, complete sequenceHlyD family secretion protein1e-1687.8
NC_010510:139685:1559961559961573601365Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completetype I secretion membrane fusion protein, HlyD family2e-1687
NC_006350:1909639:1938631193863119400461416Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative toxin-related secretion protein3e-1686.3
NC_007434:2424884:2444512244451224459271416Burkholderia pseudomallei 1710b chromosome I, complete sequenceHlyD family secretion protein3e-1686.3
NC_006350:1938631:1938631193863119400461416Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative toxin-related secretion protein3e-1686.3
NC_014117:2684631:2690239269023926914831245Burkholderia sp. CCGE1002 chromosome chromosome 1, completetype I secretion membrane fusion protein, HlyD family8e-1685.1
NC_014844:1634985:1638056163805616394801425Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometype I secretion membrane fusion protein, HlyD family2e-1583.6
NC_015968:2195645:2215989221598922171641176Enterobacter asburiae LF7a chromosome, complete genomeHlyD family type I secretion membrane fusion protein2e-1583.6
NC_014121:2090630:2107605210760521087801176Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeRtxD/HlyD/CyaD protein of type I secretion system3e-1582.8
NC_007354:233991:2339912339912355081518Ehrlichia canis str. Jake, complete genomeType I secretion membrane fusion protein, HlyD9e-1581.3
NC_005295:272708:2727082727082742521545Ehrlichia ruminantium str. Welgevonden, complete genomeputative secretion protein1e-1480.9
NC_006832:252952:2529522529522544961545Ehrlichia ruminantium str. Welgevonden, complete genomeAlkaline protease secretion protein aprE1e-1480.9
NC_006831:250074:2500742500742516181545Ehrlichia ruminantium str. Gardel, complete genomeAlkaline protease secretion protein aprE2e-1480.5
NC_012850:4422966:4441647444164744429961350Rhizobium leguminosarum bv. trifolii WSM1325, complete genometype I secretion membrane fusion protein, HlyD family2e-1480.1
NC_013173:2305394:2317529231752923189711443Desulfomicrobium baculatum DSM 4028, complete genometype I secretion membrane fusion protein, HlyD family3e-1479.7
NC_013889:1382705:1401521140152114029451425Thioalkalivibrio sp. K90mix chromosome, complete genometype I secretion membrane fusion protein, HlyD family4e-1479
NC_007626:3393940:3410349341034934116801332Magnetospirillum magneticum AMB-1, complete genomeMembrane-fusion protein6e-1478.6
NC_005085:1870890:1879136187913618802841149Chromobacterium violaceum ATCC 12472, complete genomesecretion protein1e-1377.4
NC_011138:3182807:3186481318648131878481368Alteromonas macleodii 'Deep ecotype', complete genomeHlyD family secretion protein2e-1376.6
NC_004431:324000:3395113395113407731263Escherichia coli CFT073, complete genomePutative membrane spanning export protein3e-1376.3
NC_012416:531772:5317725317725333641593Wolbachia sp. wRi, complete genomesecretion protein, HlyD family4e-1375.9
NC_002978:618723:6367746367746382941521Wolbachia endosymbiont of Drosophila melanogaster, complete genomesecretion protein, HlyD family4e-1375.9
NC_006833:409599:4095994095994110441446Wolbachia endosymbiont strain TRS of Brugia malayi, completeMembrane-fusion protein1e-1274.7
NC_009802:647901:6519956519956534611467Campylobacter concisus 13826, complete genomeacriflavine resistance protein4e-1272.8
NC_007413:2961611:2982297298229729837001404Anabaena variabilis ATCC 29413, complete genomeSecretion protein HlyD2e-1170.1
NC_014166:2498500:2531271253127125327071437Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeHlyD family type I secretion membrane fusion protein2e-1170.1
NC_014966:431342:4414234414234427631341Vibrio vulnificus MO6-24/O chromosome II, complete sequencemembrane-fusion protein3e-1169.7
NC_004460:1718088:1728169172816917295091341Vibrio vulnificus CMCP6 chromosome II, complete sequenceMembrane-fusion protein3e-1169.7
NC_005140:444353:4534704534704548101341Vibrio vulnificus YJ016 chromosome II, complete sequencemembrane-fusion protein3e-1169.7
NC_012779:2064582:2078636207863620799731338Edwardsiella ictaluri 93-146, complete genometype I secretion membrane fusion protein, HlyD family5e-1168.9
NC_017192:1745114:1759951175995117613301380Arcobacter sp. L, complete genomesecretion protein6e-1168.6
NC_013223:685628:6856286856286869711344Desulfohalobium retbaense DSM 5692, complete genometype I secretion membrane fusion protein, HlyD family8e-1168.2
NC_009784:1591851:1611002161100216123751374Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein1e-1067.8
NC_012125:2826624:2841730284173028429201191Salmonella enterica subsp. enterica serovar Paratyphi C straintype I secretion protein2e-1067.4
NC_006905:2857699:2859860285986028610501191Salmonella enterica subsp. enterica serovar Choleraesuis strputative HlyD family secretion protein2e-1067.4
NC_011083:2847318:2850885285088528520751191Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type I secretion membrane fusion protein, HlyD family2e-1067.4
NC_017192:276187:2834902834902850071518Arcobacter sp. L, complete genomeHlyD family secretion protein2e-1067.4
NC_011094:2791719:2795286279528627964761191Salmonella enterica subsp. enterica serovar Schwarzengrund strtype I secretion membrane fusion protein, HlyD family protein2e-1067.4
NC_016863:2844883:2844883284488328460461164Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1HlyD family secretion protein2e-1067
NC_016856:2896630:2896630289663028977931164Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SHlyD family secretion protein2e-1067
NC_015424:2695847:2708779270877927101971419Aeromonas veronii B565 chromosome, complete genomesecretion protein, HlyD family3e-1066.6
NC_006138:2397652:2421156242115624224451290Desulfotalea psychrophila LSv54, complete genomesimilar to secretion proteins3e-1066.2
NC_015856:3170771:3183539318353931849811443Collimonas fungivorans Ter331 chromosome, complete genomeputative HlyD family secretion protein3e-1066.2
NC_008570:3013263:3030376303037630317941419Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomesecretion protein, HlyD family6e-1065.5
NC_010067:191190:2170292170292182191191Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-1065.1
NC_020063:1051310:1066040106604010672301191Enterobacteriaceae bacterium strain FGI 57, complete genomemultidrug resistance efflux pump7e-1065.1
NC_012791:4680500:4698703469870347000191317Variovorax paradoxus S110 chromosome 1, complete genometype I secretion membrane fusion protein, HlyD family3e-0963.2
NC_009445:6424000:6437645643764564390541410Bradyrhizobium sp. ORS 278 chromosome, complete genomeHlyD family secretion protein4e-0962.8
NC_013716:3109700:3140026314002631413061281Citrobacter rodentium ICC168, complete genomeputative membrane fusion protein of T1SS4e-0962.8
NC_014166:1478469:1508985150898515101511167Arcobacter nitrofigilis DSM 7299 chromosome, complete genomesecretion protein HlyD family protein5e-0962.4
NC_014931:5470242:5480046548004654812151170Variovorax paradoxus EPS chromosome, complete genometype I secretion membrane fusion protein, HlyD family5e-0962.4
NC_014837:1570500:1590312159031215915441233Pantoea sp. At-9b chromosome, complete genomeHlyD family type I secretion membrane fusion protein6e-0962
NC_010997:910938:9109389109389123831446Rhizobium etli CIAT 652 plasmid pC, complete sequenceputative protein secretion protein, HlyD family6e-0962
NC_015138:2270181:2276522227652222780421521Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completetype I secretion membrane fusion protein, HlyD family2e-0860.5
NC_020209:5077410:5095119509511950964951377Pseudomonas poae RE*1-1-14, complete genomeType I secretion membrane fusion protein, HlyD3e-0859.7
NC_014012:3812754:3824021382402138254421422Shewanella violacea DSS12, complete genomeHlyD family secretion protein5e-0858.9
NC_014366:2904500:2918387291838729197421356Gamma proteobacterium HdN1, complete genomeType I secretion membrane fusion protein (Hemolysin secretion protein D)7e-0858.5
NC_004463:6924150:6922739692273969242801542Bradyrhizobium japonicum USDA 110, complete genomeprobable Hemolysin secretion protein D8e-0858.2
NC_014012:1097938:1100244110024411016531410Shewanella violacea DSS12, complete genomeHlyD family secretion protein1e-0758.2
NC_014931:5594946:5613772561377256150881317Variovorax paradoxus EPS chromosome, complete genometype I secretion membrane fusion protein, HlyD family1e-0757.8
NC_008314:2611873:2613152261315226144891338Ralstonia eutropha H16 chromosome 2, complete sequenceRTX toxin membrane fusion protein1e-0757.8
NC_012751:275336:2774522774522788281377Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeputative ABC associated RTX toxin transporter, HlyD/MFP family1e-0757.8
NC_004556:1641985:1647876164787616492971422Xylella fastidiosa Temecula1, complete genomehemolysin secretion protein D2e-0757.4
NC_007604:1145373:1151670115167011533731704Synechococcus elongatus PCC 7942, complete genomehypothetical protein2e-0757.4
NC_006576:456569:4674314674314691341704Synechococcus elongatus PCC 6301, complete genomehypothetical protein1e-0757.4
NC_011566:1016858:1024295102429510257041410Shewanella piezotolerans WP3, complete genomeType I secretion membrane fusion protein, HlyD2e-0757
NC_014355:3435343:3449865344986534512561392Candidatus Nitrospira defluvii, complete genomeputative type I secretion membrane fusion protein HlyD2e-0757
NC_010338:4530403:4528997452899745304061410Caulobacter sp. K31, complete genometype I secretion membrane fusion protein, HlyD family2e-0756.6
NC_005126:1549066:1549066154906615504211356Photorhabdus luminescens subsp. laumondii TTO1, complete genomeRTX toxin ABC transporter protein (MFP) RtxD3e-0756.6
NC_010995:1749054:1755295175529517565991305Cellvibrio japonicus Ueda107, complete genomeputative membrane-fusion protein3e-0756.6
NC_012912:1229333:123955012395501240374825Dickeya zeae Ech1591, complete genomebiotin/lipoyl attachment domain-containing protein3e-0756.2
NC_016147:2266419:2274851227485122762751425Pseudoxanthomonas spadix BD-a59 chromosome, complete genomemembrane-fusion protein5e-0755.8
NC_004347:4302768:4308263430826343095881326Shewanella oneidensis MR-1, complete genomeHlyD family secretion protein5e-0755.5
NC_017098:875378:8891768891768903241149Spirochaeta africana DSM 8902 chromosome, complete genomemultidrug resistance efflux pump7e-0755.1
NC_010067:3310336:3345938334593833472151278Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0653.9
NC_010552:2331486:2335417233541723367601344Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype I secretion membrane fusion protein, HlyD family2e-0653.9
NC_010515:2037825:2055046205504620563891344Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetype I secretion membrane fusion protein, HlyD family2e-0653.5
NC_013722:3022236:3029887302988730311311245Xanthomonas albilineans, complete genomeprobable membrane fusion transmembrane protein3e-0653.1
NC_014393:187454:2229602229602244201461Clostridium cellulovorans 743B chromosome, complete genomesecretion protein HlyD family protein3e-0653.1
NC_020829:2022000:2031456203145620328711416Pseudomonas denitrificans ATCC 13867, complete genomeHlyD family secretion protein3e-0653.1
NC_005126:3630459:3666606366660636679941389Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0653.1
NC_014006:3124818:3149328314932831507191392Sphingobium japonicum UT26S chromosome 1, complete genomeHlyD-family secretion protein3e-0653.1
NC_009052:2512373:2522861252286125241021242Shewanella baltica OS155, complete genomesecretion protein HlyD family protein4e-0652.4
NC_007604:1967770:1978129197812919794541326Synechococcus elongatus PCC 7942, complete genomehemolysin secretion protein-like5e-0652.4
NC_006576:2328427:2337595233759523389201326Synechococcus elongatus PCC 6301, complete genomesimilar to hemolysin secretion protein5e-0652.4