Pre_GI: BLASTP Hits

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Query: NC_007949:121747:131108 Polaromonas sp. JS666 plasmid 1, complete sequence

Start: 131108, End: 135970, Length: 4863

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011000:1397611:1428615142861514334864872Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein01642
NC_006370:1810842:1818063181806318230244962Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical protein4e-164580
NC_012779:346998:3701113701113750724962Edwardsiella ictaluri 93-146, complete genomehypothetical protein9e-141502
NC_016831:2667561:2698569269856927007282160Salmonella enterica subsp. enterica serovar Gallinarum/pullorumNERD domain-containing protein1e-131471
NC_006370:1810842:1805869180586918108454977Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical protein1e-114415
NC_014394:707305:7182267182267231904965Gallionella capsiferriformans ES-2 chromosome, complete genomeNERD domain-containing protein1e-111405
NC_007958:2370619:2376912237691223816694758Rhodopseudomonas palustris BisB5, complete genomeATPase9e-109396
NC_011004:2457778:2464559246455924693164758Rhodopseudomonas palustris TIE-1, complete genomeNERD domain protein1e-108395
NC_007645:7136956:7154626715462671595904965Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase and helicase subunit1e-108395
NC_007925:4355413:4381145438114543861004956Rhodopseudomonas palustris BisB18, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-like1e-95352
NC_012731:600518:6093686093686143234956Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-83313
NC_012691:2097287:2102959210295921079294971Tolumonas auensis DSM 9187, complete genomeNERD domain protein5e-80300
NC_012654:237175:2407082407082438603153Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequenceprotein kinase domain protein4e-38161
NC_014228:3505320:350787435078743508407534Xenorhabdus nematophila ATCC 19061, complete genome7e-28127
NC_014228:3505320:350729335072933507757465Xenorhabdus nematophila ATCC 19061, complete genome8e-28127
NC_015167:2498666:2505107250510725084333327Cellulophaga lytica DSM 7489 chromosome, complete genomeserine/threonine protein kinase1e-27126
NC_012108:1694817:1696283169628316996063324Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein2e-27125
NC_009615:1305678:1305678130567813076001923Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase4e-27124
NC_000961:801902:8181038181038200731971Pyrococcus horikoshii OT3, complete genomeDNA-binding protein7e-27124
NC_015311:403281:4078594078594097781920Prevotella denticola F0289 chromosome, complete genomehypothetical protein7e-27124
NC_008312:3923071:3938984393898439439454962Trichodesmium erythraeum IMS101, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-like1e-26123
NC_016776:1470596:1472902147290214768103909Bacteroides fragilis 638R, complete genomehypothetical protein2e-25119
NC_014933:3942156:3949999394999939519541956Bacteroides helcogenes P 36-108 chromosome, complete genomehelicase3e-25119
NC_009953:3509229:3512609351260935154342826Salinispora arenicola CNS-205 chromosome, complete genomeputative helicase1e-23113
NC_015711:8964410:8988065898806589915833519Myxococcus fulvus HW-1 chromosome, complete genomeprotein kinase6e-23111
NC_014623:2962330:2976897297689729804153519Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeprotein kinase8e-23110
NC_010002:4572573:4589202458920245925823381Delftia acidovorans SPH-1, complete genomeAAA ATPase7e-23110
NC_010170:4463000:4503816450381645071963381Bordetella petrii, complete genomehypothetical protein6e-23110
NC_013720:1605240:1630319163031916322381920Pirellula staleyi DSM 6068, complete genomeAAA ATPase2e-22108
NC_015277:3351504:3356971335697133588631893Sphingobacterium sp. 21 chromosome, complete genomeAAA ATPase5e-22107
NC_008757:111292:1320491320491353753327Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeSuperfamily I DNA and RNA helicases and helicase subunits-like protein1e-20103
NC_014640:2693060:2701831270183127035911761Achromobacter xylosoxidans A8 chromosome, complete genomesuperfamily I DNA and RNA helicases and helicase subunits-like protein2e-20102
NC_017378:986611:99825099825010014803231Helicobacter pylori Puno120 chromosome, complete genomehypothetical protein8e-20100
NC_013410:2691437:2701566270156627047123147Fibrobacter succinogenes subsp. succinogenes S85 chromosome,Superfamily I DNA and RNA helicase and helicase subunits-like protein1e-19100
NC_008758:143907:1804521804521843063855Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completeSuperfamily I DNA and RNA helicases and helicase subunits-like protein1e-1897.1
NC_010338:2443765:2460853246085324643803528Caulobacter sp. K31, complete genomesuperfamily I DNA or RNA helicase or helicase subunit-like protein3e-1895.5
NC_008698:903759:9088359088359107241890Thermofilum pendens Hrk 5, complete genomeAAA ATPase9e-1894
NC_006396:320853:3224483224483246732226Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceDNA binding protein eukaryotic-like2e-1586.3
NC_007925:4355413:4357953435795343615253573Rhodopseudomonas palustris BisB18, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-like2e-1586.3
NC_018939:454000:4649874649874661321146Helicobacter pylori 26695 chromosome, complete genomehypothetical protein2e-1586.3
NC_000915:453958:4650454650454661271083Helicobacter pylori 26695, complete genomehypothetical protein2e-1586.3
NC_017068:1450049:1451482145148214550603579Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-1483.2
NC_012881:1802000:1810217181021718140533837Desulfovibrio salexigens DSM 2638, complete genomeSuperfamily I DNA and RNA helicase and helicase subunit-like protein4e-1482
NC_009142:2480608:2491194249119424949223729Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein6e-1481.3
NC_015474:538544:5557295557295596193891Pyrococcus sp. NA2 chromosome, complete genomeDNA helicase related protein1e-1380.5
NC_015954:1437544:1437544143754414403212778Halophilic archaeon DL31 chromosome, complete genomeCRISPR-associated protein Cas42e-1379.3
NC_021064:793098:7930987930987949511854Propionibacterium avidum 44067, complete genomehypothetical protein3e-1379
NC_016887:1949927:1957259195725919609063648Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein5e-1378.2
NC_013849:397947:4060154060154078111797Ferroglobus placidus DSM 10642 chromosome, complete genometype III restriction protein res subunit4e-1378.2
NC_016612:28451:3411034110377393630Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein8e-1274.3
NC_013947:3080290:3088272308827230918623591Stackebrandtia nassauensis DSM 44728 chromosome, complete genomepeptidase C14 caspase catalytic subunit p209e-1273.9
NC_010803:242705:2648122648122675802769Chlorobium limicola DSM 245, complete genomeDNA helicase1e-1173.6
NC_013929:7278414:7278414727841472823553942Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-1172.4
NC_021150:5234000:5242961524296152465993639Azotobacter vinelandii CA6, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-related protein5e-1171.2
NC_012560:5276000:5285069528506952887073639Azotobacter vinelandii DJ, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-related protein5e-1171.2
NC_014298:251783:270902270902271726825Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceDNA binding protein -like protein5e-1171.2
NC_016593:1527456:1527456152745615311933738Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeAAA ATPase1e-0966.6
NC_013411:2236166:2236166223616622399333768Geobacillus sp. Y412MC61, complete genomeAAA ATPase2e-0966.6
NC_014915:1376035:1376035137603513798773843Geobacillus sp. Y412MC52 chromosome, complete genomeAAA ATPase2e-0966.2
NC_010102:4745949:4750883475088347543983516Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0966.2
NC_011750:4775770:4796684479668448002113528Escherichia coli IAI39 chromosome, complete genomeputative superfamily I DNA helicase7e-0964.3
NC_006510:1446490:1446490144649014502573768Geobacillus kaustophilus HTA426, complete genomehypothetical protein9e-0963.9
NC_013849:397947:4039154039154057801866Ferroglobus placidus DSM 10642 chromosome, complete genomeAAA ATPase1e-0863.5
NC_017063:775337:7864377864377882481812Helicobacter pylori ELS37 chromosome, complete genomeregulator of nonsense transcripts 12e-0863.2
NC_004556:1641985:1660432166043216640043573Xylella fastidiosa Temecula1, complete genomeDNA helicase2e-0862.8
NC_013222:615948:6245196245196278783360Robiginitalea biformata HTCC2501, complete genomehypothetical protein2e-0862.8
NC_013174:2624365:2633455263345526371983744Jonesia denitrificans DSM 20603, complete genomehypothetical protein6e-0861.2
NC_021066:839734:8552138552138599824770Raoultella ornithinolytica B6, complete genomesuperfamily I DNA/RNA helicase1e-0760.1
NC_017379:996500:100815510081551008685531Helicobacter pylori Puno135 chromosome, complete genomehypothetical protein2e-0759.7
NC_009939:16437:232342323423998765Deinococcus geothermalis DSM 11300 plasmid pDGEO02, completesuperfamily I DNA/RNA helicase-like protein2e-0759.7
NC_017379:996500:1008689100868910113852697Helicobacter pylori Puno135 chromosome, complete genomehypothetical protein3e-0758.9
NC_014256:683384:715093715093715953861Helicobacter pylori B8 chromosome, complete genomeregulator of nonsense transcripts 13e-0758.9
NC_020210:1275031:1339187133918713428013615Geobacillus sp. GHH01, complete genomeDNA/RNA helicase5e-0758.5
NC_012803:2195808:2195808219580821993983591Micrococcus luteus NCTC 2665, complete genomepredicted nuclease (RecB family)4e-0758.5
NC_014393:1022843:1022843102284310257462904Clostridium cellulovorans 743B chromosome, complete genomeputative DNA helicase4e-0758.5
NC_007086:2887875:2934819293481929381183300Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein8e-0757.8
NC_008741:81914:8897988979925093531Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,hypothetical protein1e-0657
NC_013971:3296272:3298069329806933014343366Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein2e-0656.6
NC_013961:441719:4698664698664732313366Erwinia amylovora, complete genomeprobable helicase senataxin2e-0656.6
NC_012214:474359:4864154864154897533339Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein2e-0656.2
NC_007651:72952:1319181319181361204203Burkholderia thailandensis E264 chromosome I, complete sequenceProtein kinase domain protein2e-0655.8
NC_019974:1280500:128386912838691284354486Natronococcus occultus SP4, complete genome5e-0655.1
NC_014391:1317957:1329830132983013339394110Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeNERD domain-containing protein9e-0653.9