Pre_GI: BLASTN Hits

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Query: NC_007948:360199 Polaromonas sp. JS666, complete genome

Start: 360199, End: 392302, Length: 32104

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008782:31674403167440322216554726Acidovorax sp. JS42, complete genome3e-161577BLASTN svgBLASTP svg
NC_008757:15186215186218056928708Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, complete5e-132480BLASTN svgBLASTP svg
NC_008786:28507362850736287895428219Verminephrobacter eiseniae EF01-2, complete genome3e-108400BLASTN svgBLASTP svg
NC_007948:51789351789353927721385Polaromonas sp. JS666, complete genome2e-78301BLASTN svgBLASTP svg
NC_015383:22903622903624724318208Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence2e-57232BLASTN svgBLASTP svg
NC_010627:233572*23357225652922958Burkholderia phymatum STM815 plasmid pBPHY02, complete sequence3e-47198BLASTN svgBLASTP svg
NC_007974:10078341007834103035922526Ralstonia metallidurans CH34 chromosome 2, complete sequence4e-40174BLASTN svgBLASTP svg
NC_008752:415599*41559944209126493Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-33153BLASTN svgBLASTP svg
NC_010002:528529*52852955003421506Delftia acidovorans SPH-1, complete genome5e-33151BLASTN svgBLASTP svg
NC_015677:285896*28589630970623811Ramlibacter tataouinensis TTB310 chromosome, complete genome3e-31145BLASTN svgBLASTP svg
NC_014910:465980*46598050776541786Alicycliphilus denitrificans BC chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_007948:16955001695500171430618807Polaromonas sp. JS666, complete genome8e-29137BLASTN svgBLASTP svg
NC_015563:19513681951368199617644809Delftia sp. Cs1-4 chromosome, complete genome5e-27131BLASTN svgBLASTP svg
NC_010508:1206498*1206498122498518488Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence8e-26127BLASTN svgBLASTP svg
NC_014722:22604892260489228672626238Burkholderia rhizoxinica HKI 454, complete genome5e-24121BLASTN svgBLASTP svg
NC_015422:45080284508028454712739100Alicycliphilus denitrificans K601 chromosome, complete genome2e-23119BLASTN svgBLASTP svg
NC_007973:32408663240866326591125046Ralstonia metallidurans CH34 chromosome 1, complete sequence2e-20109BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome2e-20109BLASTN svgBLASTP svg
NC_013446:16485561648556170768159126Comamonas testosteroni CNB-2, complete genome2e-20109BLASTN svgBLASTP svg
NC_012792:70786470786472612718264Variovorax paradoxus S110 chromosome 2, complete genome7e-20107BLASTN svgBLASTP svg
NC_013446:28200002820000286592045921Comamonas testosteroni CNB-2, complete genome1e-18103BLASTN svgBLASTP svg
NC_010676:30440530440532659922195Burkholderia phytofirmans PsJN chromosome 2, complete sequence4e-18101BLASTN svgBLASTP svg
NC_014931:724102*72410275590331802Variovorax paradoxus EPS chromosome, complete genome4e-18101BLASTN svgBLASTP svg
NC_015563:43830004383000440526222263Delftia sp. Cs1-4 chromosome, complete genome4e-18101BLASTN svgBLASTP svg
NC_015976:20235402023540205359930060Sphingobium sp. SYK-6, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_007626:41806741806744309925033Magnetospirillum magneticum AMB-1, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010508:451184*45118447649825315Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_010515:13750911375091141715142061Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence6e-1177.8BLASTN svgBLASTP svg
NC_010801:55027055027059663446365Burkholderia multivorans ATCC 17616 chromosome 3, complete6e-1177.8BLASTN svgBLASTP svg
NC_010087:31906331906336759948537Burkholderia multivorans ATCC 17616 chromosome 3, complete6e-1177.8BLASTN svgBLASTP svg
NC_010087:46059146059149073730147Burkholderia multivorans ATCC 17616 chromosome 3, complete6e-1177.8BLASTN svgBLASTP svg
NC_007510:19598831959883201803458152Burkholderia sp. 383 chromosome 1, complete sequence3e-1075.8BLASTN svgBLASTP svg
NC_014839:68308683089375025443Pantoea sp. At-9b plasmid pPAT9B02, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete2e-0869.9BLASTN svgBLASTP svg
NC_010524:824145*82414584860224458Leptothrix cholodnii SP-6, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013446:4281250*4281250430762526376Comamonas testosteroni CNB-2, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_014118:2316000*2316000234104325044Burkholderia sp. CCGE1002 chromosome chromosome 2, complete6e-0867.9BLASTN svgBLASTP svg
NC_015458:33289053328905335692528021Pusillimonas sp. T7-7 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008752:3955327*3955327397626320937Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008789:13935261393526142028526760Halorhodospira halophila SL1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009138:1843998*1843998189681452817Herminiimonas arsenicoxydans, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011146:1998981*1998981205724258262Geobacter bemidjiensis Bem, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011992:889985*88998591136221378Acidovorax ebreus TPSY, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014972:2798670*2798670282159922930Desulfobulbus propionicus DSM 2032 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014973:1941500*1941500196723925740Geobacter sp. M18 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008340:17337351733735176122027486Alkalilimnicola ehrlichei MLHE-1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007953:31487231487234061825747Burkholderia xenovorans LB400 chromosome 3, complete sequence1e-0663.9BLASTN svgBLASTP svg