Query: NC_007948:3541987 Polaromonas sp. JS666, complete genome
Start: 3541987, End: 3563599, Length: 21613
Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria
General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008781:1426285* | 1426285 | 1450593 | 24309 | Polaromonas naphthalenivorans CJ2, complete genome | 0 | 1245 | BLASTN svg | BLASTP svg |
NC_007908:1946902* | 1946902 | 1972325 | 25424 | Rhodoferax ferrireducens T118, complete genome | 0 | 910 | BLASTN svg | BLASTP svg |
NC_014931:4490526* | 4490526 | 4510364 | 19839 | Variovorax paradoxus EPS chromosome, complete genome | 3e-132 | 480 | BLASTN svg | BLASTP svg |
NC_010524:2117347* | 2117347 | 2142042 | 24696 | Leptothrix cholodnii SP-6, complete genome | 2e-56 | 228 | BLASTN svg | BLASTP svg |
NC_008789:1837493* | 1837493 | 1856164 | 18672 | Halorhodospira halophila SL1, complete genome | 2e-34 | 155 | BLASTN svg | BLASTP svg |
NC_015422:4508028 | 4508028 | 4547127 | 39100 | Alicycliphilus denitrificans K601 chromosome, complete genome | 3e-30 | 141 | BLASTN svg | BLASTP svg |
NC_014221:3175013* | 3175013 | 3200355 | 25343 | Truepera radiovictrix DSM 17093 chromosome, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_012560:2348202* | 2348202 | 2383261 | 35060 | Azotobacter vinelandii DJ, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_021150:2348214* | 2348214 | 2383273 | 35060 | Azotobacter vinelandii CA6, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_014924:2517068 | 2517068 | 2540128 | 23061 | Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009142:2565561 | 2565561 | 2589370 | 23810 | Saccharopolyspora erythraea NRRL 2338, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_014974:758129* | 758129 | 783385 | 25257 | Thermus scotoductus SA-01 chromosome, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_012792:962292 | 962292 | 990683 | 28392 | Variovorax paradoxus S110 chromosome 2, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_006576:1435422 | 1435422 | 1456335 | 20914 | Synechococcus elongatus PCC 6301, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007604:168176 | 168176 | 189258 | 21083 | Synechococcus elongatus PCC 7942, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_014391:421547 | 421547 | 444514 | 22968 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_010364:733558* | 733558 | 762402 | 28845 | Halobacterium salinarum R1, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_003911:2042389* | 2042389 | 2065712 | 23324 | Silicibacter pomeroyi DSS-3, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_002607:742886* | 742886 | 772099 | 29214 | Halobacterium sp. NRC-1, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015666:1849618* | 1849618 | 1878324 | 28707 | Halopiger xanaduensis SH-6 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_014153:2187409 | 2187409 | 2211406 | 23998 | Thiomonas intermedia K12 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_008347:1636660* | 1636660 | 1664386 | 27727 | Maricaulis maris MCS10, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008786:266959 | 266959 | 291883 | 24925 | Verminephrobacter eiseniae EF01-2, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014960:115614* | 115614 | 138360 | 22747 | Anaerolinea thermophila UNI-1, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010002:3002354 | 3002354 | 3025606 | 23253 | Delftia acidovorans SPH-1, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007802:1991211* | 1991211 | 2026187 | 34977 | Jannaschia sp. CCS1, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007794:2839239* | 2839239 | 2875915 | 36677 | Novosphingobium aromaticivorans DSM 12444, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |