Pre_GI: BLASTP Hits

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Query: NC_007948:4620661:4641176 Polaromonas sp. JS666, complete genome

Start: 4641176, End: 4641538, Length: 363

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007948:4646344:467261646726164672984369Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP8e-38155
NC_015724:339500:351931351931352311381Cupriavidus necator N-1 plasmid BB2p, complete sequenceendoribonuclease L-PSP4e-34143
NC_008752:620802:625054625054625431378Acidovorax avenae subsp. citrulli AAC00-1, complete genomeEndoribonuclease L-PSP1e-31135
NC_002947:4994335:503248050324805032833354Pseudomonas putida KT2440, complete genomehypothetical protein5e-26116
NC_008700:3927896:394708839470883947441354Shewanella amazonensis SB2B, complete genomeconserved hypothetical translation initiation inhibitor, YjgF family6e-26115
NC_010611:208268:231345231345231698354Acinetobacter baumannii ACICU, complete genomeputative translation initiation inhibitor, yjgF family5e-25112
NC_014924:1701952:172350917235091723853345Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeEndoribonuclease L-PSP4e-22103
NC_011144:2674242:269121226912122691571360Phenylobacterium zucineum HLK1, complete genometranslation initiation inhibitor, yjgF family2e-21101
NC_016147:1788219:179286217928621793203342Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeendoribonuclease l-psp protein6e-2096.3
NC_016513:1859767:186698918669891867342354Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeputative translation initiation inhibitor5e-2096.3
NC_013416:1526920:153183815318381532191354Aggregatibacter actinomycetemcomitans D11S-1, complete genomeputative translation initiation inhibitor, YjgF family protein5e-2096.3
NC_016027:2446806:244789724478972448247351Gluconacetobacter xylinus NBRC 3288, complete genometranslation initiation inhibitor1e-1891.7
NC_013282:2582720:260612826061282606472345Cronobacter turicensis, complete genomeUPF0076 protein yoaB5e-1889.7
NC_007948:4646344:465957146595714659939369Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP6e-1889.4
NC_013757:1343396:135492513549251355287363Geodermatophilus obscurus DSM 43160, complete genomeEndoribonuclease L-PSP3e-1787
NC_007948:4558000:457382245738224574193372Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP6e-1786.3
NC_015136:2282488:232364623236462323990345Burkholderia sp. CCGE1001 chromosome 1, complete sequenceendoribonuclease L-PSP1e-1684.7
NC_009085:1232890:125221212522121252520309Acinetobacter baumannii ATCC 17978, complete genomehypothetical protein8e-1682.4
NC_016002:2825017:283421028342102834527318Pseudogulbenkiania sp. NH8B, complete genomeendoribonuclease L-PSP family protein2e-1581.3
NC_010125:955863:957436957436957786351Gluconacetobacter diazotrophicus PAl 5, complete genomeputative endoribonuclease4e-1580.1
NC_013209:2582878:261799526179952618345351Acetobacter pasteurianus IFO 3283-01, complete genometranslation initiation inhibitor YjgF6e-1579.3
NC_006677:1255079:125996212599621260312351Gluconobacter oxydans 621H, complete genomehypothetical protein5e-1476.3
NC_011126:129937:135039135039135419381Hydrogenobaculum sp. Y04AAS1, complete genomeendoribonuclease L-PSP4e-1270.1
NC_008698:560529:563553563553563933381Thermofilum pendens Hrk 5, complete genomeputative endoribonuclease L-PSP7e-1269.3
NC_015733:2581324:260361526036152603959345Pseudomonas putida S16 chromosome, complete genomeendoribonuclease L-PSP family protein1e-1168.2
NC_017277:3083494:311081331108133111205393Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-1167.8
NC_019978:1022209:102664010266401027026387Halobacteroides halobius DSM 5150, complete genomeendoribonuclease L-PSP, putative3e-1167.4
NC_009708:633054:641199641199641579381Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeendoribonuclease L-PSP8e-1165.9
NC_004088:3923804:393208239320823932462381Yersinia pestis KIM, complete genomehypothetical protein1e-1065.5
NC_010634:4001154:401088840108884011268381Yersinia pseudotuberculosis PB1/+, complete genomeendoribonuclease L-PSP1e-1065.5
NC_003143:675622:688077688077688457381Yersinia pestis CO92, complete genomeputative translational inhibitor protein1e-1065.5
NC_008150:3495851:350498335049833505363381Yersinia pestis Antiqua, complete genomeputative translational inhibitor protein1e-1065.5
NC_010159:1071937:107785110778511078231381Yersinia pestis Angola, complete genomeputative endoribonuclease L-PSP1e-1065.5
NC_006155:4062000:407068240706824071062381Yersinia pseudotuberculosis IP 32953, complete genomeputative translational inhibitor protein1e-1065.5
NC_010465:660207:668352668352668732381Yersinia pseudotuberculosis YPIII, complete genomeendoribonuclease L-PSP1e-1065.5
NC_005810:3272765:328090632809063281286381Yersinia pestis biovar Microtus str. 91001, complete genomeputative translational inhibitor protein1e-1065.5
NC_017265:3790750:379744437974443797824381Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative translational inhibitor protein1e-1065.5
NC_017160:676249:685923685923686303381Yersinia pestis D182038 chromosome, complete genomeputative translational inhibitor protein1e-1065.5
NC_017154:671816:683738683738684118381Yersinia pestis D106004 chromosome, complete genomeputative translational inhibitor protein1e-1065.5
NC_014029:729675:741586741586741966381Yersinia pestis Z176003 chromosome, complete genomeputative translational inhibitor protein1e-1065.5
NC_009381:460358:470044470044470424381Yersinia pestis Pestoides F chromosome, complete genometranslational inhibitor protein1e-1065.5
NC_008149:587689:599607599607599987381Yersinia pestis Nepal516, complete genometranslational inhibitor protein1e-1065.5
NC_010645:1341475:136041313604131360799387Bordetella avium 197N, complete genomeendoribonuclease2e-1064.3
NC_015557:114648:138504138504138884381Hydrogenobaculum sp. 3684 chromosome, complete genomeendoribonuclease L-PSP3e-1063.9
NC_015587:114684:138540138540138920381Hydrogenobaculum sp. SHO chromosome, complete genomeendoribonuclease L-PSP3e-1063.9
NC_020411:114683:138539138539138919381Hydrogenobaculum sp. HO, complete genomeendoribonuclease L-PSP3e-1063.9
NC_016791:1980844:200449120044912004871381Clostridium sp. BNL1100 chromosome, complete genomeendoribonuclease L-PSP5e-1063.2
NC_015873:1411718:141171814117181412104387Megasphaera elsdenii DSM 20460, complete genomeputative endoribonuclease L-PSP8e-1062.4
NC_014632:11925:310333103331416384Ilyobacter polytropus DSM 2926 chromosome, complete genomeendoribonuclease L-PSP1e-0962
NC_012489:1874415:187402618740261874418393Gemmatimonas aurantiaca T-27, complete genomeputative endoribonuclease1e-0961.6
NC_012658:2138791:214621421462142146582369Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative endoribonuclease L-PSP2e-0961.2
NC_016025:807226:829399829399829797399Candidatus Chloracidobacterium thermophilum B chromosome chromosomeendoribonuclease L-PSP2e-0960.8
NC_017361:930280:930280930280930657378Helicobacter pylori SouthAfrica7 chromosome, complete genometranslation initiation inhibitor5e-0960.1
NC_015873:380485:409686409686410054369Megasphaera elsdenii DSM 20460, complete genomeputative endoribonuclease L-PSP4e-0960.1
NC_015500:2417041:243375424337542434122369Treponema brennaborense DSM 12168 chromosome, complete genomeendoribonuclease L-PSP4e-0960.1
NC_014632:113420:126595126595126978384Ilyobacter polytropus DSM 2926 chromosome, complete genomeendoribonuclease L-PSP5e-0959.7
NC_007907:4926548:495091549509154951295381Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-0959.7
NC_014221:398636:411607411607411999393Truepera radiovictrix DSM 17093 chromosome, complete genomeendoribonuclease L-PSP6e-0959.7
NC_009802:1827138:184306818430681843502435Campylobacter concisus 13826, complete genomeputative endoribonuclease L-PSP8e-0959.3
NC_006087:28490:633956339563799405Leifsonia xyli subsp. xyli str. CTCB07, complete genomeprotein synthesis inhibitor8e-0959.3
NC_010516:2093901:209988820998882100256369Clostridium botulinum B1 str. Okra, complete genomeputative endoribonuclease L-PSP7e-0959.3
NC_005042:513931:532072532072532470399Prochlorococcus marinus subsp. marinus str. CCMP1375, completePutative translation initiation inhibitor9e-0958.9
NC_010674:615963:630362630362630736375Clostridium botulinum B str. Eklund 17B, complete genomeputative endoribonuclease L-PSP1e-0858.2
NC_009699:2142177:215012221501222150490369Clostridium botulinum F str. Langeland chromosome, complete genomeendoribonuclease L-PSP2e-0857.8
NC_017297:2143000:215022121502212150589369Clostridium botulinum F str. 230613 chromosome, complete genomeendoribonuclease L-PSP2e-0857.8
NC_017079:700524:701704701704702087384Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomehypothetical protein2e-0857.8
NC_009481:676478:688498688498688896399Synechococcus sp. WH 7803 chromosome, complete genomeputative translation initiation inhibitor2e-0857.8
NC_021182:401129:416427416427416807381Clostridium pasteurianum BC1, complete genomeendoribonuclease L-PSP, putative2e-0857.8
NC_009495:2085000:209178220917822092150369Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeendoribonuclease L-PSP2e-0857.8
NC_009697:2012500:202042320204232020791369Clostridium botulinum A str. ATCC 19397 chromosome, completeendoribonuclease L-PSP2e-0857.8
NC_009698:2012500:202064020206402021008369Clostridium botulinum A str. Hall chromosome, complete genomeendoribonuclease L-PSP2e-0857.8
NC_016885:809000:814549814549814929381Pyrobaculum oguniense TE7 chromosome, complete genomeendoribonuclease L-PSP3e-0857.4
NC_013744:159861:178667178667179047381Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeendoribonuclease L-PSP3e-0857.4
NC_010723:575254:594070594070594447378Clostridium botulinum E3 str. Alaska E43, complete genomeputative endoribonuclease L-PSP3e-0857.4
NC_015144:1526669:153075515307551531147393Weeksella virosa DSM 16922 chromosome, complete genomeendoribonuclease L-PSP2e-0857.4
NC_013202:771161:807690807690808067378Halomicrobium mukohataei DSM 12286, complete genomeendoribonuclease L-PSP2e-0857.4
AC_000091:4472000:447520744752074475593387Escherichia coli W3110 DNA, complete genomeketoacid-binding protein4e-0857
NC_010473:4564590:457035845703584570744387Escherichia coli str. K-12 substr. DH10B, complete genomeketoacid-binding protein4e-0857
NC_000913:4462782:446855044685504468936387Escherichia coli K12, complete genomeketoacid-binding protein4e-0857
NC_011742:4795733:479996147999614800347387Escherichia coli S88 chromosome, complete genomeketoacid-binding protein4e-0857
NC_012947:3947238:395991839599183960304387Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeendoribonuclease L-PSP4e-0857
NC_012967:4449576:445380444538044454190387Escherichia coli B str. REL606 chromosome, complete genomeketoacid-binding protein4e-0857
NC_010658:4494103:450877145087714509157387Shigella boydii CDC 3083-94, complete genomeputative endoribonuclease L-PSP4e-0857
NC_007613:4217557:425144742514474251872426Shigella boydii Sb227, complete genomehypothetical protein3e-0857
NC_010498:4821519:482574748257474826172426Escherichia coli SMS-3-5, complete genomeputative endoribonuclease L-PSP3e-0857
NC_010556:316996:321607321607321996390Exiguobacterium sibiricum 255-15, complete genomeendoribonuclease L-PSP5e-0856.6
NC_008817:539349:556560556560556952393Prochlorococcus marinus str. MIT 9515, complete genomePutative translation initiation inhibitor, yjgF family5e-0856.6
NC_003210:870587:882328882328882705378Listeria monocytogenes EGD-e, complete genomehypothetical protein4e-0856.6
NC_013766:906550:918309918309918686378Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein4e-0856.6
NC_012563:2230403:223849122384912238859369Clostridium botulinum A2 str. Kyoto, complete genomeputative endoribonuclease L-PSP4e-0856.6
NC_014364:2904443:290909329090932909467375Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeendoribonuclease L-PSP6e-0856.2
NC_007576:435713:457772457772458158387Lactobacillus sakei subsp. sakei 23K, complete genomePutative single-stranded mRNA endoribonuclease7e-0855.8
NC_020063:4170464:418221241822124182598387Enterobacteriaceae bacterium strain FGI 57, complete genomeendoribonuclease L-PSP, putative1e-0755.5
NC_011297:1167615:117385711738571174234378Dictyoglomus thermophilum H-6-12, complete genomeendoribonuclease L-PSP1e-0755.5
NC_016642:1234500:123607312360731236456384Pseudovibrio sp. FO-BEG1 chromosome, complete genomezinc carboxypeptidase-like protein1e-0755.5
NC_013922:2110894:211089421108942111277384Natrialba magadii ATCC 43099 chromosome, complete genomeEndoribonuclease L-PSP1e-0755.1
NC_003143:1880000:190011019001101900487378Yersinia pestis CO92, complete genomeYjgF-family lipoprotein1e-0755.1
NC_014029:2607666:260766626076662608043378Yersinia pestis Z176003 chromosome, complete genomeYjgF-family lipoprotein1e-0755.1
NC_017265:1715035:173654617365461736923378Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,YjgF-family lipoprotein1e-0755.1
NC_005810:1976000:199639219963921996799408Yersinia pestis biovar Microtus str. 91001, complete genomeYjgF-family lipoprotein1e-0755.1
NC_005072:508827:526041526041526433393Prochlorococcus marinus subsp. pastoris str. CCMP1986, completehypothetical protein2e-0754.7
NC_020272:3396800:342115334211533421530378Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein2e-0754.7
NC_015666:1293500:129843212984321298812381Halopiger xanaduensis SH-6 chromosome, complete genomeendoribonuclease L-PSP2e-0754.7
NC_011661:1332309:135425513542551354632378Dictyoglomus turgidum DSM 6724, complete genomeendoribonuclease L-PSP2e-0754.7
NC_014618:586240:610365610365610754390Enterobacter cloacae SCF1 chromosome, complete genomeendoribonuclease L-PSP2e-0754.3
NC_009091:493302:510528510528510920393Prochlorococcus marinus str. MIT 9301, complete genomePutative translation initiation inhibitor, yjgF family2e-0754.3
NC_019974:3013338:302391930239193024308390Natronococcus occultus SP4, complete genomeendoribonuclease L-PSP, putative2e-0754.3
NC_008319:1727686:173335017333501733754405Synechococcus sp. CC9311, complete genomeputative endoribonuclease L-PSP4e-0753.1
NC_006526:1976779:200247620024762002922447Zymomonas mobilis subsp. mobilis ZM4, complete genometranslational inhibitor protein5e-0753.1
NC_009840:544816:562030562030562422393Prochlorococcus marinus str. MIT 9215, complete genomePutative translation initiation inhibitor, yjgF family6e-0752.8
NC_007577:503440:520657520657521049393Prochlorococcus marinus str. MIT 9312, complete genomeYjgF-like protein8e-0752.4
NC_007511:3512100:352445935244593524809351Burkholderia sp. 383 chromosome 2, complete sequenceEndoribonuclease L-PSP9e-0752.4
NC_009614:3714770:372855137285513728928378Bacteroides vulgatus ATCC 8482 chromosome, complete genomeendoribonuclease L-PSP9e-0752.4
NC_012669:96966:100822100822101265444Beutenbergia cavernae DSM 12333, complete genomeEndoribonuclease L-PSP1e-0652
NC_005070:1486496:148833414883341488741408Synechococcus sp. WH 8102, complete genomeputative translation initiation inhibitor1e-0652
NC_009659:997779:100838110083811008776396Janthinobacterium sp. Marseille chromosome, complete genometranslation initiation inhibitor1e-0652
NC_015727:1076927:108296410829641083347384Cupriavidus necator N-1 plasmid BB1p, complete sequenceendoribonuclease L-PSP family protein 61e-0652