Pre_GI: BLASTP Hits

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Query: NC_007948:4620661:4626093 Polaromonas sp. JS666, complete genome

Start: 4626093, End: 4626818, Length: 726

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017223:51180:536235362354357735Bordetella pertussis CS chromosome, complete genomeputative aspartate/glutamate racemase1e-43176
NC_002929:52500:536235362354357735Bordetella pertussis Tohama I, complete genomeputative aspartate/glutamate racemase1e-43176
NC_015677:1460000:146540814654081466145738Ramlibacter tataouinensis TTB310 chromosome, complete genomeaspartate racemase3e-38158
NC_014618:4657719:468570046857004686434735Enterobacter cloacae SCF1 chromosome, complete genomeaspartate racemase3e-33142
NC_010498:1094000:110588911058891106608720Escherichia coli SMS-3-5, complete genomeaspartate racemase6e-33140
NC_000961:597385:597385597385598071687Pyrococcus horikoshii OT3, complete genomeaspartate racemase1e-32140
NC_015761:4355335:437758243775824378316735Salmonella bongori NCTC 12419, complete genomeaspartate racemase1e-32139
NC_012125:4716000:474932047493204750054735Salmonella enterica subsp. enterica serovar Paratyphi C strainaspartate racemase2e-31135
NC_006905:4638707:467200546720054672739735Salmonella enterica subsp. enterica serovar Choleraesuis strputative aspartate racemase2e-31135
NC_009142:5647737:565601356560135656768756Saccharopolyspora erythraea NRRL 2338, complete genomeaspartate racemase4e-31134
NC_014500:1646854:166670616667061667422717Dickeya dadantii 3937 chromosome, complete genomeputative aspartate racemase4e-29128
NC_013421:1954915:195752019575201958236717Pectobacterium wasabiae WPP163, complete genomeaspartate racemase2e-28125
NC_011295:1120584:112754711275471128266720Coprothermobacter proteolyticus DSM 5265, complete genomeaspartate racemase1e-26119
NC_016830:4639388:4645685464568546471811497Pseudomonas fluorescens F113 chromosome, complete genomeaspartate racemase5e-1994.7
NC_017190:466236:479815479815480495681Bacillus amyloliquefaciens LL3 chromosome, complete genomeamino acid racemase1e-1376.6
NC_014551:483773:493886493886494566681Bacillus amyloliquefaciens DSM 7, complete genomeamino acid racemase1e-1376.6
NC_020272:3396800:342665734266573427337681Bacillus amyloliquefaciens IT-45, complete genomeaspartate racemase6e-1374.7
NC_009725:496443:528210528210528890681Bacillus amyloliquefaciens FZB42, complete genomeRacX1e-1273.6
NC_019842:484933:522218522218522898681Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,aspartate racemase2e-1272.8
NC_017188:461177:481365481365482045681Bacillus amyloliquefaciens TA208 chromosome, complete genomeaspartate racemase6e-1271.2
NC_017191:467207:487387487387488067681Bacillus amyloliquefaciens XH7 chromosome, complete genomeamino acid racemase6e-1271.2
NC_003413:1521080:155854015585401559235696Pyrococcus furiosus DSM 3638, complete genomeputative aspartate racemase7e-1167.8
NC_020410:495184:514630514630515310681Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative amino-acid racemase2e-1065.9
NC_016048:3611146:362779336277933628488696Oscillibacter valericigenes Sjm18-20, complete genomeaspartate racemase4e-0962
NC_011883:1182000:119259811925981193314717Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,aspartate racemase2e-0859.7
NC_019942:987134:101040910104091011083675Aciduliprofundum sp. MAR08-339, complete genomeaspartate racemase4e-0858.5
NC_013926:829665:834044834044834721678Aciduliprofundum boonei T469 chromosome, complete genomeaspartate racemase5e-0754.7