Pre_GI: BLASTP Hits

Some Help

Query: NC_007948:4558000:4583587 Polaromonas sp. JS666, complete genome

Start: 4583587, End: 4584717, Length: 1131

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010676:2793237:2819758281975828208821125Burkholderia phytofirmans PsJN chromosome 2, complete sequenceFAD dependent oxidoreductase6e-105381
NC_011144:2674242:2691607269160726927881182Phenylobacterium zucineum HLK1, complete genomeFAD dependent oxidoreductase2e-91336
NC_005773:5684000:5706494570649457076481155Pseudomonas syringae pv. phaseolicola 1448A, complete genomeoxidoreductase, FAD-binding5e-31135
NC_007005:2686551:2707924270792427091081185Pseudomonas syringae pv. syringae B728a, complete genomeFAD dependent oxidoreductase3e-28126
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase6e-28125
NC_021184:2936244:2944356294435629454771122Desulfotomaculum gibsoniae DSM 7213, complete genomeglycine/D-amino acid oxidase, deaminating3e-27123
NC_003413:1666520:1669331166933116704671137Pyrococcus furiosus DSM 3638, complete genomesarcosine oxidase, subunit beta3e-26119
NC_013522:991649:1012936101293610140871152Thermanaerovibrio acidaminovorans DSM 6589, complete genomeFAD dependent oxidoreductase2e-24113
NC_008391:2404443:2416021241602124171691149Burkholderia cepacia AMMD chromosome 2, complete sequenceFAD dependent oxidoreductase5e-23108
NC_009718:643200:6625756625756637471173Fervidobacterium nodosum Rt17-B1, complete genomeFAD dependent oxidoreductase5e-23108
NC_000961:1532245:1534456153445615355891134Pyrococcus horikoshii OT3, complete genomesarcosine oxidase1e-22107
NC_000868:318434:3212723212723224111140Pyrococcus abyssi GE5, complete genomesarcosine oxidase, subunit beta3e-22106
NC_010623:1871492:1896546189654618977031158Burkholderia phymatum STM815 chromosome 2, complete sequenceFAD dependent oxidoreductase2e-20100
NC_015474:301428:3036243036243047571134Pyrococcus sp. NA2 chromosome, complete genomesarcosine oxidase2e-20100
NC_015559:2745570:2763521276352127647681248Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeSarcosine oxidase4e-2099.4
NC_009328:3322802:3330853333085333319261074Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesarcosine oxidase subunit beta2e-1996.7
NC_020210:3341976:3350044335004433511171074Geobacillus sp. GHH01, complete genomesarcosine oxidase subunit beta9e-1994.7
NC_020291:5409587:5419225541922554203521128Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglycine/D-amino acid oxidase1e-1894
NC_016642:1913432:1944993194499319461381146Pseudovibrio sp. FO-BEG1 chromosome, complete genomesarcosine oxidase, beta subunit family protein5e-1892.4
NC_007952:1587500:1602497160249716037411245Burkholderia xenovorans LB400 chromosome 2, complete sequenceSarcosine oxidase, beta subunit, heterotetrameric5e-1789
NC_008148:2498000:2507596250759625088371242Rubrobacter xylanophilus DSM 9941, complete genomeFAD dependent oxidoreductase2e-1687
NC_009328:2378345:2400547240054724017731227Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeSoxB-like sarcosine oxidase subunit beta related2e-1686.7
NC_018644:1197897:1220595122059512218511257Alpha proteobacterium HIMB59 chromosome, complete genomeN-methylglutamate dehydrogenase subunit A6e-1685.5
NC_002928:3781657:3789612378961237908651254Bordetella parapertussis 12822, complete genomesarcosine oxidase beta subunit1e-1584.7
NC_014310:1822751:1848084184808418495381455Ralstonia solanacearum PSI07 megaplasmid, complete sequenceFAD-dependent oxidoreductase1e-1584.3
NC_003910:4234000:4238988423898842402381251Colwellia psychrerythraea 34H, complete genomesarcosine oxidase, beta subunit3e-1583.2
NC_003910:2588000:2595357259535725966071251Colwellia psychrerythraea 34H, complete genomesarcosine oxidase, beta subunit3e-1583.2
NC_018643:641360:6504746504746517271254Alpha proteobacterium HIMB5 chromosome, complete genomesarcosine oxidase, beta subunit family, heterotetrameric form8e-1581.6
NC_007948:4646344:4669711466971146708291119Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase9e-1581.6
NC_015724:339500:3540603540603551751116Cupriavidus necator N-1 plasmid BB2p, complete sequenceopine oxidase subunit B9e-1581.6
NC_013926:71186:8478584785859421158Aciduliprofundum boonei T469 chromosome, complete genomeFAD dependent oxidoreductase3e-1480.1
NC_009952:2381601:2389926238992623911761251Dinoroseobacter shibae DFL 12, complete genomeputative sarcosine oxidase, beta subunit1e-1377.8
NC_014815:4621552:4650013465001346511611149Micromonospora sp. L5 chromosome, complete genomefad dependent oxidoreductase2e-1377
NC_020064:1854589:1854589185458918557041116Serratia marcescens FGI94, complete genomeglycine/D-amino acid oxidase, deaminating2e-1377
NC_015172:1075592:1104747110474711058681122Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeGlycine oxidase4e-1376.3
NC_011982:206784:2278512278512289211071Agrobacterium vitis S4 plasmid pTiS4, complete sequenceD-nopaline dehydrogenase6e-1375.5
NC_016051:241438:2441492441492453091161Thermococcus sp. AM4 chromosome, complete genomesarcosine oxidase subunit beta7e-1375.5
NC_016884:2701217:2711476271147627126601185Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeFAD dependent oxidoreductase7e-1375.1
NC_015757:831285:8383518383518395501200Sulfobacillus acidophilus TPY chromosome, complete genomesarcosine oxidase8e-1375.1
NC_008027:5842740:5844182584418258454321251Pseudomonas entomophila L48, complete genomehydrogen cyanide synthase HcnC3e-1169.7
NC_014217:3431878:3446251344625134474201170Starkeya novella DSM 506 chromosome, complete genomeFAD dependent oxidoreductase8e-1168.6
NC_013947:4363250:4377230437723043784111182Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeFAD dependent oxidoreductase8e-1168.6
NC_008343:88184:9147191471927241254Granulibacter bethesdensis CGDNIH1, complete genomesarcosine oxidase beta subunit7e-1168.6
NC_012483:3731542:3798659379865937997921134Acidobacterium capsulatum ATCC 51196, complete genomeoxidoreductase, FAD-dependent1e-1068.2
NC_014205:760428:7604287604287615701143Staphylothermus hellenicus DSM 12710 chromosome, complete genomeFAD dependent oxidoreductase1e-1068.2
NC_013757:3012130:3010874301087430121331260Geodermatophilus obscurus DSM 43160, complete genomesarcosine oxidase, beta subunit family9e-1168.2
NC_015518:585816:5858165858165869191104Acidianus hospitalis W1 chromosome, complete genomeFAD dependent oxidoreductase9e-1168.2
NC_014910:1912552:1933026193302619341861161Alicycliphilus denitrificans BC chromosome, complete genomefad dependent oxidoreductase1e-1067.8
NC_020829:809457:8109308109308120421113Pseudomonas denitrificans ATCC 13867, complete genomeFAD-dependent oxidoreductase3e-1066.6
NC_015458:2441435:2447150244715024485021353Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein3e-1066.2
NC_012589:1917421:1918409191840919195271119Sulfolobus islandicus L.S.2.15, complete genomeFAD dependent oxidoreductase1e-0964.7
NC_007948:4646344:4661759466175946628951137Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase3e-0963.2
NC_017059:2771085:2790005279000527912491245Rhodospirillum photometricum DSM 122, complete genomeFAD dependent oxidoreductase4e-0962.8
NC_007948:4558000:4579787457978745809141128Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase5e-0962.4
NC_019896:2805098:2830603283060328317121110Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeGlycine oxidase6e-0962.4
NC_016626:1592781:1596766159676615980941329Burkholderia sp. YI23 plasmid byi_1p, complete sequenceFAD dependent oxidoreductase5e-0859.3
NC_007511:1300978:1305473130547313068071335Burkholderia sp. 383 chromosome 2, complete sequenceFAD dependent oxidoreductase1e-0758.2
NC_007492:3954345:3993694399369439949531260Pseudomonas fluorescens PfO-1, complete genomeFAD dependent oxidoreductase2e-0757.4
NC_019978:2036779:2044852204485220463841533Halobacteroides halobius DSM 5150, complete genomeputative dehydrogenase2e-0757
NC_017955:3057592:3064499306449930657191221Modestobacter marinus, complete genomesarcosine oxidase subunit beta7e-0755.5
NC_012912:2998511:3003067300306730043981332Dickeya zeae Ech1591, complete genomeFAD dependent oxidoreductase9e-0755.1
NC_010511:4313769:4313769431376943163002532Methylobacterium sp. 4-46 chromosome, complete genomeFAD dependent oxidoreductase8e-0755.1
NC_003305:1035342:1055268105526810565961329Agrobacterium tumefaciens str. C58 chromosome linear, completeoxidoreductase2e-0653.9
NC_014931:3886405:3887567388756738888261260Variovorax paradoxus EPS chromosome, complete genomeFAD dependent oxidoreductase2e-0653.9
NC_003308:1:2997829978310961119Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceD-nopaline dehydrogenase3e-0653.1
NC_003065:27163:6338163381644991119Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencenopaline oxidase subunit B3e-0653.1
NC_008148:2231045:2267216226721622685021287Rubrobacter xylanophilus DSM 9941, complete genomeFAD dependent oxidoreductase4e-0652.8
NC_011894:3820000:3826585382658538278561272Methylobacterium nodulans ORS 2060, complete genomeFAD dependent oxidoreductase6e-0652.4
NC_015136:2282488:2325858232585823270031146Burkholderia sp. CCGE1001 chromosome 1, complete sequenceFAD dependent oxidoreductase9e-0651.6