Pre_GI: BLASTP Hits

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Query: NC_007948:4558000:4578122 Polaromonas sp. JS666, complete genome

Start: 4578122, End: 4579513, Length: 1392

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010676:2793237:2820879282087928222941416Burkholderia phytofirmans PsJN chromosome 2, complete sequenceBFD domain protein (2Fe-2S)-binding domain protein2e-134479
NC_011144:2674242:2692785269278526941431359Phenylobacterium zucineum HLK1, complete genomesarcosine oxidase, subunit alpha3e-108392
NC_003308:1:2827328273296911419Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceD-nopaline dehydrogenase4e-92338
NC_003065:27163:6167661676630941419Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencenopaline oxidase subunit A4e-92338
NC_011982:206784:2261742261742275681395Agrobacterium vitis S4 plasmid pTiS4, complete sequenceD-nopaline dehydrogenase4e-88325
NC_015724:339500:3523083523083537681461Cupriavidus necator N-1 plasmid BB2p, complete sequenceopine oxidase subunit A4e-81302
NC_007948:4646344:4660047466004746614231377Polaromonas sp. JS666, complete genomeBFD-like (2Fe-2S)-binding region3e-81302
NC_015136:2282488:2324124232412423255151392Burkholderia sp. CCGE1001 chromosome 1, complete sequenceFAD-dependent pyridine nucleotide-disulfide oxidoreductase3e-80299
NC_003037:1245645:1245645124564512470211377Sinorhizobium meliloti 1021 plasmid pSymA, complete sequenceputative opine oxidase subunit5e-73275
NC_007948:4646344:4671121467112146726051485Polaromonas sp. JS666, complete genomeBFD-like (2Fe-2S)-binding region2e-72273
NC_007948:4620661:4641535464153546429561422Polaromonas sp. JS666, complete genomeBFD-like (2Fe-2S)-binding region3e-72272
NC_011883:2031222:2031523203152320329111389Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,BFD domain protein (2Fe-2S)-binding domain protein3e-63242
NC_007005:2686551:2709105270910527104961392Pseudomonas syringae pv. syringae B728a, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase:BFD-like [2Fe-2S]-binding region6e-54212
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase3e-49196
NC_008391:2404443:2417162241716224186071446Burkholderia cepacia AMMD chromosome 2, complete sequenceBFD domain protein (2Fe-2S)-binding domain protein3e-46186
NC_005773:5684000:5705088570508857064971410Pseudomonas syringae pv. phaseolicola 1448A, complete genomepyridine nucleotide-disulphide oxidoreductase family protein1e-40167
NC_008027:5842740:5845435584543558468291395Pseudomonas entomophila L48, complete genomehydrogene cyanide synthase HcnB1e-33144
NC_014815:4621552:4648390464839046497751386Micromonospora sp. L5 chromosome, complete genomebfd domain protein (2fe-2S)-binding domain protein3e-32139
NC_007492:3954345:3994946399494639963551410Pseudomonas fluorescens PfO-1, complete genomeBFD-like (2Fe-2S)-binding region9e-30131
NC_021184:2936244:2946110294611029477021593Desulfotomaculum gibsoniae DSM 7213, complete genomethioredoxin reductase9e-28125
NC_015172:1075592:1106628110662811077281101Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase5e-26119
NC_014910:1912552:193251619325161932785270Alicycliphilus denitrificans BC chromosome, complete genome3e-26119
NC_012483:3731542:3797136379713637984281293Acidobacterium capsulatum ATCC 51196, complete genomepyridine nucleotide-disulfide oxidoreductase3e-25116
NC_020829:809457:8094578094578107041248Pseudomonas denitrificans ATCC 13867, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-23111
NC_020064:1854589:1855942185594218572011260Serratia marcescens FGI94, complete genomeNAD(FAD)-dependent dehydrogenase6e-23108
NC_020291:5409587:5420695542069554222721578Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-22107
NC_015566:1941407:1942781194278119440431263Serratia sp. AS12 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase4e-22106
NC_003413:1666520:1667150166715016685741425Pyrococcus furiosus DSM 3638, complete genomesarcosine oxidase subunit alpha5e-2099.4
NC_014364:3001597:3025981302598130276391659Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-1997.4
NC_015737:2691246:2691246269124626928201575Clostridium sp. SY8519, complete genomeNAD-dependent dehydrogenase2e-1997.1
NC_000868:318434:3190643190643205091446Pyrococcus abyssi GE5, complete genomesarcosine oxidase, subunit alpha4e-1996.3
NC_000961:1532245:1532245153224515336931449Pyrococcus horikoshii OT3, complete genomeD-nopaline dehydrogenase2e-1894.4
NC_015474:301428:3014283014283028641437Pyrococcus sp. NA2 chromosome, complete genomesarcosine oxidase, subunit alpha2e-1894
NC_010623:1871492:1894975189497518964891515Burkholderia phymatum STM815 chromosome 2, complete sequenceFAD-dependent pyridine nucleotide-disulphide oxidoreductase3e-1893.6
NC_013947:4363250:4378871437887143803761506Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeBFD domain-containing protein (2Fe-2S)-binding domain-containing protein1e-1791.7
NC_020210:3341976:3351474335147433525621089Geobacillus sp. GHH01, complete genomehypothetical protein6e-1375.9
NC_013522:991649:101408410140841014410327Thermanaerovibrio acidaminovorans DSM 6589, complete genomeBFD domain protein (2Fe-2S)-binding domain protein2e-1274.3
NC_015172:1075592:110586111058611106631771Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeBFD domain protein (2Fe-2S)-binding domain protein7e-1272.4
NC_009952:2217877:2243321224332122463233003Dinoroseobacter shibae DFL 12, complete genomesarcosine oxidase subunit alpha9e-1272
NC_013522:991649:1014925101492510160161092Thermanaerovibrio acidaminovorans DSM 6589, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase1e-1171.2
NC_013926:71186:8670186701881371437Aciduliprofundum boonei T469 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase5e-1169.7
NC_021184:2936244:294547029454702945820351Desulfotomaculum gibsoniae DSM 7213, complete genomeNAD(P)H-nitrite reductase9e-1168.6
NC_020291:5409587:542035454203545420683330Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeNAD(P)H-nitrite reductase2e-1067.4
NC_016641:2773757:2786959278695927881821224Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein3e-1067
NC_017955:3057592:3066050306605030689322883Modestobacter marinus, complete genomesarcosine oxidase subunit alpha1e-0861.6
NC_013926:71186:859268592686207282Aciduliprofundum boonei T469 chromosome, complete genomeBFD domain protein (2Fe-2S)-binding domain protein2e-0757.4
NC_003047:74986:97908979081008712964Sinorhizobium meliloti 1021, complete genomePUTATIVE SARCOSINE OXIDASE ALPHA SUBUNIT TRANSMEMBRANE PROTEIN3e-0757.4
NC_015559:2745570:2760284276028427632022919Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeglycine cleavage T protein (aminomethyl transferase)5e-0756.2
NC_000961:1532245:153419315341931534459267Pyrococcus horikoshii OT3, complete genomehypothetical protein1e-0655.1
NC_015474:301428:303364303364303627264Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein2e-0654.7
NC_016641:2773757:278620827862082786630423Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein2e-0654.3
NC_009328:3322802:333193233319323332267336Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein2e-0654.3
NC_017059:2739015:2739015273901527418732859Rhodospirillum photometricum DSM 122, complete genomeaminomethyltransferase2e-0653.9