Pre_GI: BLASTP Hits

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Query: NC_007948:3502843:3512992 Polaromonas sp. JS666, complete genome

Start: 3512992, End: 3513240, Length: 249

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016626:1781956:178195617819561782873918Burkholderia sp. YI23 plasmid byi_1p, complete sequenceLysR family transcriptional regulator9e-25112
NC_014311:1545175:155104715510471551979933Ralstonia solanacearum PSI07 chromosome, complete genomeLysR family transcriptional regulator4e-22103
NC_010508:2776283:279216327921632793125963Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family2e-1994.4
NC_007650:2901751:1250812508135151008Burkholderia thailandensis E264 chromosome II, complete sequencetranscriptional regulator, LysR family2e-1271.2
NC_009075:3113393:111171111712034918Burkholderia pseudomallei 668 chromosome II, complete sequenceputative HTH-type transcriptional regulator YeaT4e-1270.1
NC_009079:2339756:121751217513092918Burkholderia mallei NCTC 10247 chromosome I, complete sequencetranscriptional regulator, LysR family4e-1270.1
NC_006351:3159630:110281102811945918Burkholderia pseudomallei K96243 chromosome 2, complete sequenceLysR-family regulatory protein4e-1270.1
NC_006349:2311817:121751217513092918Burkholderia mallei ATCC 23344 chromosome 2, complete sequencetranscriptional regulator, LysR family4e-1270.1
NC_009078:3087759:110541105411971918Burkholderia pseudomallei 1106a chromosome II, complete sequencetranscriptional regulator, LysR family4e-1270.1
NC_006905:401154:421201421201422166966Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulator, LysR family2e-1167.8
NC_010102:2721374:273981327398132740778966Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1167.8
NC_011083:403022:423789423789424754966Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, LysR family2e-1167.8
NC_003197:367430:376663376663377628966Salmonella typhimurium LT2, complete genomeputative transcriptional regulator2e-1167.8
NC_011294:346915:355967355967356932966Salmonella enterica subsp. enterica serovar Enteritidis strLysR family transcriptional regulator2e-1167.8
NC_016810:366908:376141376141377106966Salmonella enterica subsp. enterica serovar Typhimurium strputative lysR family transcriptional regulator2e-1167.8
NC_016831:2627515:264694726469472647912966Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-1167.8
NC_016856:365665:377348377348378313966Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator2e-1167.8
NC_016857:366908:376141376141377106966Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator2e-1167.8
NC_016860:397138:418054418054419019966Salmonella enterica subsp. enterica serovar Typhimurium strLysR family transcriptional regulator2e-1167.8
NC_016863:367404:376637376637377602966Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator2e-1167.8
NC_017046:366905:376138376138377103966Salmonella enterica subsp. enterica serovar Typhimurium str. 798lysR family transcriptional regulator2e-1167.8
NC_015580:3779724:378802837880283788939912Novosphingobium sp. PP1Y, complete genomeLysR family transcriptional regulator2e-1167.4
NC_011205:371001:380053380053381018966Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853LysR family transcriptional regulator3e-1167
NC_014323:625155:644592644592645491900Herbaspirillum seropedicae SmR1 chromosome, complete genomeLysR family transcription regulator protein6e-1166.2
NC_015556:1188500:121386012138601214789930Pseudomonas fulva 12-X chromosome, complete genometranscriptional regulator, LysR family1e-1065.5
NC_011000:1262324:128948912894891290394906Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein1e-1065.5
NC_009092:2644164:266093626609362661850915Shewanella loihica PV-4, complete genometranscriptional regulator, LysR family1e-1065.1
NC_003305:1035342:105416810541681055082915Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, LysR family2e-1064.3
NC_003063:1019674:101967410196741020588915Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein2e-1064.3
NC_010524:4644587:466507146650714666003933Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family3e-1063.9
NC_015410:3093465:311390831139083114726819Pseudomonas mendocina NK-01 chromosome, complete genomeLysR family transcriptional regulator4e-1063.5
NC_009778:1222273:124138612413861242297912Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0962
NC_020260:1293860:131801713180171318928912Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-0962
NC_008752:415599:440503440503441480978Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family2e-0961.6
NC_014618:2989000:299040629904062991323918Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator2e-0961.6
NC_014306:3210311:321398632139863214903918Erwinia billingiae Eb661, complete genomeTranscriptional regulator, LysR family3e-0960.8
NC_012560:4350465:436488143648814365789909Azotobacter vinelandii DJ, complete genomeLysR family transcriptional regulator protein4e-0960.5
NC_021150:4350461:436487743648774365785909Azotobacter vinelandii CA6, complete genomeLysR family transcriptional regulator protein4e-0960.5
NC_017047:2079368:208807320880732088990918Rahnella aquatilis HX2 chromosome, complete genomeLysR family transcriptional regulator3e-0960.5
NC_008149:2366500:236775123677512368692942Yersinia pestis Nepal516, complete genomeputativeLlysR-family transcriptional regulatory protein7e-0959.3
NC_010159:1818500:182000518200051820946942Yersinia pestis Angola, complete genomesubstrate-binding transcriptional regulator, LysR family7e-0959.3
NC_004088:1851500:186526218652621866203942Yersinia pestis KIM, complete genometranscriptional regulator LYSR-type7e-0959.3
NC_003143:2804500:280596728059672806908942Yersinia pestis CO92, complete genomeputativeLlysR-family transcriptional regulatory protein7e-0959.3
NC_006155:2979500:299898729989872999928942Yersinia pseudotuberculosis IP 32953, complete genomeputativeLlysR-family transcriptional regulatory protein7e-0959.3
NC_010634:2894631:291693429169342917875942Yersinia pseudotuberculosis PB1/+, complete genomeLysR family transcriptional regulator7e-0959.3
NC_005810:2549680:257202125720212572962942Yersinia pestis biovar Microtus str. 91001, complete genomeLysR family transcriptional regulator7e-0959.3
NC_009381:2138625:215817421581742159115942Yersinia pestis Pestoides F chromosome, complete genomeLlysR family transcriptional regulatory protein7e-0959.3
NC_009708:1735903:175320517532051754146942Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeLysR family substrate binding transcriptional regulator7e-0959.3
NC_014029:2756500:275829027582902759231942Yersinia pestis Z176003 chromosome, complete genomeLysR family transcriptional regulator7e-0959.3
NC_017154:2804000:280544028054402806381942Yersinia pestis D106004 chromosome, complete genomeLysR family transcriptional regulator7e-0959.3
NC_017160:2787637:280267528026752803616942Yersinia pestis D182038 chromosome, complete genomeputative LlysR-family transcriptional regulatory protein7e-0959.3
NC_017168:2941938:295552829555282956469942Yersinia pestis A1122 chromosome, complete genomeLysR family transcriptional regulator7e-0959.3
NC_017265:1571305:158634315863431587284942Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,LysR family transcriptional regulator7e-0959.3
NC_014306:3102000:310329631032963104204909Erwinia billingiae Eb661, complete genomeTranscriptional regulator, LysR family7e-0959.3
NC_016514:1183356:118335611833561184267912Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YhjC8e-0958.9
NC_008313:959638:982142982142983050909Ralstonia eutropha H16 chromosome 1, complete sequencetranscriptional regulator, LysR-family1e-0858.5
NC_013421:1397841:140939014093901410295906Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, LysR family1e-0858.5
NC_008043:499399:501443501443502357915Silicibacter sp. TM1040 mega plasmid, complete sequencetranscriptional regulator, LysR family1e-0858.5
NC_011094:1584038:159814815981481599056909Salmonella enterica subsp. enterica serovar Schwarzengrund strLysR substrate binding domain-containing protein9e-0855.5
NC_011149:1578451:158418615841861585094909Salmonella enterica subsp. enterica serovar Agona str. SL483,LysR substrate binding domain protein1e-0755.1
NC_018691:3082000:308210430821043083027924Alcanivorax dieselolei B5 chromosome, complete genomeputative LysR-family transcriptional regulator2e-0754.3
NC_012913:772641:787491787491788399909Aggregatibacter aphrophilus NJ8700, complete genomeLysR protein2e-0754.3
NC_009997:415808:427983427983428882900Shewanella baltica OS195, complete genometranscriptional regulator, LysR family3e-0753.9
NC_008322:373531:376102376102376998897Shewanella sp. MR-7, complete genometranscriptional regulator, LysR family3e-0753.9
NC_015566:69190:898538985390764912Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator3e-0753.9
NC_015567:69190:898538985390764912Serratia sp. AS9 chromosome, complete genomeLysR family transcriptional regulator3e-0753.9
NC_016901:414670:426845426845427744900Shewanella baltica OS678 chromosome, complete genomeLysR family transcriptional regulator3e-0753.9
NC_011566:1016858:103807010380701038804735Shewanella piezotolerans WP3, complete genomeTranscriptional regulator, LysR family3e-0753.9
NC_009256:3056000:306680930668093067783975Burkholderia vietnamiensis G4 chromosome 1, complete sequenceLysR family transcriptional regulator4e-0753.5
NC_011761:2546081:255562825556282556551924Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeLysR family transcriptional regulator4e-0753.5
NC_011206:2447905:245745224574522458375924Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator, LysR family4e-0753.5
NC_007510:1959883:197844619784461979363918Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, LysR family4e-0753.5
NC_010102:2967464:301931430193143020225912Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-0752.8
NC_010170:4739925:4763884476388447649421059Bordetella petrii, complete genometranscriptional regulator, LysR-family7e-0752.8
NC_004347:4302768:432902443290244329935912Shewanella oneidensis MR-1, complete genometranscriptional regulator, LysR family6e-0752.8
NC_011094:2913500:295993329599332960844912Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, LysR family protein1e-0652.4
NC_015711:7905360:790987079098707910784915Myxococcus fulvus HW-1 chromosome, complete genomeLysR family transcriptional regulator9e-0752.4
NC_016832:2859491:287821828782182879129912Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,LysR-family transcriptional regulator9e-0752.4
NC_014640:3808639:382405038240503824958909Achromobacter xylosoxidans A8 chromosome, complete genomeLysR family transcriptional regulator9e-0752.4
NC_011083:3009760:302920130292013030112912Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, LysR family9e-0752.4
NC_016860:3029272:307802630780263078937912Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator9e-0752.4
NC_017046:3027161:307591230759123076823912Salmonella enterica subsp. enterica serovar Typhimurium str. 798LysR-family transcriptional regulator9e-0752.4
NC_003198:2856596:290504229050422905974933Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible LysR-family transcriptional regulator9e-0752.4
NC_004631:2872192:289090028909002891832933Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible LysR-family transcriptional regulator9e-0752.4
NC_011080:2982346:303284430328443033755912Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, LysR family8e-0752.4
NC_016863:2974333:302306430230643023996933Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator8e-0752.4
NC_016857:3028421:307715130771513078083933Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator8e-0752.4
NC_016856:3026426:307481230748123075744933Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator8e-0752.4
NC_016810:3028421:307715130771513078083933Salmonella enterica subsp. enterica serovar Typhimurium strLysR family transcriptional regulator8e-0752.4
NC_003197:3005842:305457530545753055507933Salmonella typhimurium LT2, complete genomeputative transcriptional regulator8e-0752.4
NC_011274:2909799:293013829301382931070933Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91LysR family transcriptional regulator1e-0652
NC_014118:1528851:1542140154214015431651026Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, LysR family1e-0652
NC_011294:2919906:293933429393342940266933Salmonella enterica subsp. enterica serovar Enteritidis strLysR family transcriptional regulator1e-0652
NC_009076:779407:7794077794077806541248Burkholderia pseudomallei 1106a chromosome I, complete sequencetranscriptional regulator, LysR family1e-0652
NC_004337:3590323:364250236425023643473972Shigella flexneri 2a str. 301, complete genomeputative transcriptional regulator LYSR-type1e-0651.6
NC_007434:1001514:1001514100151410028001287Burkholderia pseudomallei 1710b chromosome I, complete sequenceLysR family transcriptional regulator1e-0651.6
NC_004337:3621985:364250236425023643473972Shigella flexneri 2a str. 301, complete genomeputative transcriptional regulator LYSR-type1e-0651.6
NC_017328:3655876:367735936773593678330972Shigella flexneri 2002017 chromosome, complete genomeputative transcriptional regulator LYSR-type1e-0651.6
NC_016831:2867766:291661929166192917530912Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative LysR-family transcriptional regulator1e-0651.6
NC_011147:2814664:286314028631402864051912Salmonella enterica subsp. enterica serovar Paratyphi A strLysR family transcriptional regulator2e-0651.2
NC_006511:2819128:286760428676042868515912Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible LysR-family transcriptional regulator2e-0651.2
NC_012125:2938519:298858029885802989512933Salmonella enterica subsp. enterica serovar Paratyphi C strainLysR family transcriptional regulator2e-0651.2
NC_011002:772243:7747107747107757261017Burkholderia cenocepacia J2315 chromosome 3, complete sequenceLysR family regulatory protein3e-0650.8
NC_011149:2912219:296475229647522965663912Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator, LysR family3e-0650.4
NC_012968:1945614:194632519463251947209885Methylotenera mobilis JLW8, complete genometranscriptional regulator, LysR family3e-0650.4
NC_011000:1023800:103125810312581032232975Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein4e-0650.4
NC_014500:2019113:202921820292182030132915Dickeya dadantii 3937 chromosome, complete genomeLysR family transcriptional regulator5e-0650.1
NC_008800:3642679:364779436477943648690897Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LysR family transcriptional regulator4e-0650.1
NC_008149:3373229:337717333771733378081909Yersinia pestis Nepal516, complete genomeLysR-family transcriptional regulatory protein6e-0649.7
NC_006155:3596120:360008136000813600989909Yersinia pseudotuberculosis IP 32953, complete genomeLysR-family transcriptional regulatory protein6e-0649.7
NC_008150:513783:540580540580541488909Yersinia pestis Antiqua, complete genomeLysR-family transcriptional regulatory protein6e-0649.7
NC_010634:3509880:351384135138413514749909Yersinia pseudotuberculosis PB1/+, complete genomeLysR family transcriptional regulator6e-0649.7
NC_003143:875367:879311879311880219909Yersinia pestis CO92, complete genomeLysR-family transcriptional regulatory protein6e-0649.7
NC_004088:3505383:350932735093273510235909Yersinia pestis KIM, complete genometranscriptional regulator6e-0649.7
NC_010159:3448490:345345334534533454361909Yersinia pestis Angola, complete genomesubstrate-binding transcriptional regulator, LysR family6e-0649.7
NC_005810:3142384:317050331705033171411909Yersinia pestis biovar Microtus str. 91001, complete genomeLysR family transcriptional regulator6e-0649.7
NC_009708:1131500:115719311571931158101909Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeLysR family substrate binding transcriptional regulator6e-0649.7
NC_014029:1146900:117369811736981174606909Yersinia pestis Z176003 chromosome, complete genomeLysR-family transcriptional regulatory protein6e-0649.7
NC_010125:3854957:386840238684023869304903Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, LysR family6e-0649.7
NC_003295:2898998:2911930291193029130541125Ralstonia solanacearum GMI1000, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN6e-0649.7
NC_015224:1067390:109425310942531095149897Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LysR family transcriptional regulator6e-0649.7
NC_017265:1000342:102714310271431028051909Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,LysR-family transcriptional regulatory protein6e-0649.7
NC_017168:199381:225063225063225971909Yersinia pestis A1122 chromosome, complete genomeLysR-family transcriptional regulatory protein6e-0649.7
NC_017160:1092839:111851511185151119423909Yersinia pestis D182038 chromosome, complete genomeLysR-family transcriptional regulatory protein6e-0649.7
NC_017154:1089044:111584311158431116751909Yersinia pestis D106004 chromosome, complete genomeLysR-family transcriptional regulatory protein6e-0649.7
NC_010465:1118147:114564811456481146556909Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, LysR family6e-0649.3
NC_012912:2800884:280584128058412806743903Dickeya zeae Ech1591, complete genometranscriptional regulator, LysR family7e-0649.3
NC_020064:3998715:408849740884974089402906Serratia marcescens FGI94, complete genometranscriptional regulator8e-0649.3