Pre_GI: BLASTP Hits

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Query: NC_007947:2447635:2479188 Methylobacillus flagellatus KT, complete genome

Start: 2479188, End: 2481122, Length: 1935

Host Lineage: Methylobacillus flagellatus; Methylobacillus; Methylophilaceae; Methylophilales; Proteobacteria; Bacteria

General Information: This strain was isolated from activated sludge found at the wastewater treatment plant in Moscow, Russia and is the fastest growing methylotroph discovered. Methanol-degrading bacterium. Methylobacillus flagellatus is a methylotroph, able to grow on compounds such as methanol and methyamines. These organisms play a role in the environmental cycling of carbon and nitrogen.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012969:2476318:2508883250888325107991917Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD0734
NC_014733:2363838:2377778237777823796941917Methylovorus sp. MP688 chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod0734
NC_012968:2228943:2243624224362422455641941Methylotenera mobilis JLW8, complete genomeRNA polymerase, sigma 70 subunit, RpoD0681
NC_013959:2449315:2470861247086124728251965Sideroxydans lithotrophicus ES-1 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD7e-174610
NC_014323:961825:9651409651409676922553Herbaspirillum seropedicae SmR1 chromosome, complete genomeRNA polymerase sigma-70 factor transcription regulator protein3e-164579
NC_015856:1182974:1198779119877912012742496Collimonas fungivorans Ter331 chromosome, complete genomeRNA polymerase sigma factor8e-163574
NC_010805:530876:5350295350295374432415Burkholderia multivorans ATCC 17616 chromosome 2, completeRNA polymerase primary sigma factor3e-162572
NC_010086:1907959:1937861193786119402752415Burkholderia multivorans ATCC 17616 chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD3e-162572
NC_012721:1986436:2004708200470820071252418Burkholderia glumae BGR1 chromosome 2, complete genomeRNA polymerase, sigma 70 subunit, RpoD family protein7e-162571
NC_009075:2428248:2436729243672924389392211Burkholderia pseudomallei 668 chromosome II, complete sequenceRNA polymerase sigma factor RpoD1e-161570
NC_009659:543000:5459655459655484452481Janthinobacterium sp. Marseille chromosome, complete genomeRNA polymerase primary sigma factor1e-161570
NC_016625:1259778:1274704127470412769172214Burkholderia sp. YI23 chromosome 2, complete sequenceRNA polymerase sigma-70 subunit RpoD1e-161570
NC_007650:722961:7258447258447282462403Burkholderia thailandensis E264 chromosome II, complete sequenceRNA polymerase sigma factor RpoD1e-161570
NC_009078:2351046:2359522235952223617322211Burkholderia pseudomallei 1106a chromosome II, complete sequenceRNA polymerase sigma factor RpoD1e-161570
NC_007435:1077792:1089393108939310917952403Burkholderia pseudomallei 1710b chromosome II, complete sequenceRNA polymerase sigma factor1e-161570
NC_006351:2398403:2406884240688424089262043Burkholderia pseudomallei K96243 chromosome 2, complete sequenceRNA polymerase sigma factor2e-161569
NC_010552:752007:7562057562057586222418Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD1e-160567
NC_009255:1071868:1076072107607210785012430Burkholderia vietnamiensis G4 chromosome 2, complete sequenceRNA polymerase sigma factor RpoD1e-160566
NC_008752:1523768:1541468154146815438132346Acidovorax avenae subsp. citrulli AAC00-1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-151537
NC_015138:1582458:1597787159778716001292343Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRNA polymerase sigma-70 subunit RpoD9e-152537
NC_013016:1441424:1443383144338314453111929Neisseria meningitidis alpha14 chromosome, complete genomeRNA polymerase sigma factor RpoD3e-151535
NC_017518:1610803:1612761161276116146891929Neisseria meningitidis NZ-05/33 chromosome, complete genomeRNA polymerase sigma factor rpoD5e-151535
NC_017511:602000:6167016167016186291929Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeRNA polymerase sigma factor RpoD5e-151535
NC_011761:2067695:2080861208086120827351875Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRNA polymerase sigma factor RpoD6e-151535
NC_007005:5500196:5502219550221955040691851Pseudomonas syringae pv. syringae B728a, complete genomeRNA polymerase sigma factor5e-149528
NC_014837:3739408:3746389374638937482331845Pantoea sp. At-9b chromosome, complete genomeRNA polymerase,sigma 70 subunit,RpoD5e-148525
NC_016816:674171:6861796861796880231845Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor RpoD3e-148525
NC_015663:770485:7723817723817742251845Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRNA polymerase sigma factor RpoD1e-147523
NC_004578:568236:5888465888465906961851Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor1e-147523
NC_009831:1255995:1273107127310712749451839Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-147522
NC_014618:690056:7265327265327283761845Enterobacter cloacae SCF1 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD1e-146520
NC_015379:6226661:6226661622666162285081848Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,RNA polymerase sigma factor (sigma-70)2e-146519
NC_009439:4404942:4404942440494244067891848Pseudomonas mendocina ymp, complete genomeRNA polymerase sigma factor RpoD4e-146518
NC_008800:4013298:4019198401919840210361839Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,RNA polymerase sigma factor RpoD2e-145516
NC_015224:3892972:3894878389487838967161839Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,RNA polymerase sigma factor RpoD2e-145516
NC_009434:796878:8138468138468155551710Pseudomonas stutzeri A1501, complete genomeRNA polymerase sigma factor RpoD9e-145514
NC_008149:587689:6087836087836106211839Yersinia pestis Nepal516, complete genomeRNA polymerase sigma factor RpoD8e-145514
NC_009708:633054:6495746495746514121839Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRNA polymerase sigma factor RpoD8e-145514
NC_014029:729675:7507627507627526001839Yersinia pestis Z176003 chromosome, complete genomeRNA polymerase sigma factor RpoD8e-145514
NC_017154:671816:6929146929146947521839Yersinia pestis D106004 chromosome, complete genomeRNA polymerase sigma factor RpoD8e-145514
NC_008463:632869:6471916471916490441854Pseudomonas aeruginosa UCBPP-PA14, complete genomesigma factor RpoD3e-144512
NC_009512:469000:4860034860034878531851Pseudomonas putida F1, complete genomeRNA polymerase, sigma 70 subunit, RpoD1e-143510
NC_016602:3122700:3127558312755831294441887Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD1e-143510
NC_017160:676249:6950996950996961571059Yersinia pestis D182038 chromosome, complete genomeRNA polymerase sigma factor RpoD4e-143508
NC_015733:443122:4575524575524594021851Pseudomonas putida S16 chromosome, complete genomeRNA polymerase sigma factor RpoD7e-143508
NC_002971:1523065:1541273154127315433692097Coxiella burnetii RSA 493, complete genomeRNA polymerase sigma factor RpoD4e-142505
NC_009727:357206:3772503772503793462097Coxiella burnetii Dugway 7E9-12, complete genomeRNA polymerase sigma factor RpoD4e-142505
NC_016445:2938887:2961443296144329633201878Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRNA polymerase primary sigma factor2e-141503
NC_002505:514732:5504075504075522841878Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRNA polymerase sigma factor2e-141503
NC_007912:909112:9259819259819278221842Saccharophagus degradans 2-40, complete genomeputative transcriptional regulator, Fis family2e-141503
NC_012668:62500:6800568005699331929Vibrio cholerae MJ-1236 chromosome 1, complete sequenceRNA polymerase sigma factor RpoD6e-141501
NC_016513:1761830:1782400178240017842501851Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA-directed RNA polymerase sigma subunit RpoD5e-139495
NC_013416:1429881:1448118144811814499681851Aggregatibacter actinomycetemcomitans D11S-1, complete genomeRNA polymerase sigma factor RpoD (Sigma-70)6e-139494
NC_007645:6407370:6411603641160364135221920Hahella chejuensis KCTC 2396, complete genomeRNA polymerase sigma-70 factor RpoD2e-138493
NC_017033:276741:2903512903512922311881Frateuria aurantia DSM 6220 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-138493
NC_010939:1633000:1651959165195916538181860Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeRNA polymerase sigma factor 704e-138492
NC_010278:1625695:1649248164924816511071860Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,RNA polymerase sigma factor RpoD4e-138492
NC_008260:2340824:2350147235014723520481902Alcanivorax borkumensis SK2, complete genomeRNA polymerase sigma factor RpoD1e-137491
NC_004545:15650:5831358313601421830Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeRNA polymerase sigma factor RpoD6e-138491
NC_009053:1668500:1688201168820116900601860Actinobacillus pleuropneumoniae L20, complete genomeRNA polymerase sigma factor 705e-138491
NC_007509:644000:6590416590416610742034Burkholderia sp. 383 chromosome 3, complete sequencesigma 70 (RpoD)1e-135484
NC_007508:4476726:4490897449089744927741878Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeRNA polymerase sigma factor2e-132473
NC_003902:4430621:4442015444201544438891875Xanthomonas campestris pv. campestris str. ATCC 33913, completeRNA polymerase sigma factor RpoD8e-132471
NC_007086:4489153:4499598449959845014721875Xanthomonas campestris pv. campestris str. 8004, complete genomeRNA polymerase sigma factor8e-132471
NC_015947:3991696:4005239400523940070921854Burkholderia sp. JV3 chromosome, complete genomeRNA polymerase sigma-70 subunit RpoD6e-131468
NC_011071:4000620:4024096402409640259521857Stenotrophomonas maltophilia R551-3, complete genomeRNA polymerase, sigma 70 subunit, RpoD5e-131468
NC_014118:2316000:2320588232058823225851998Burkholderia sp. CCGE1002 chromosome chromosome 2, completeRNA polymerase, sigma 70 subunit, RpoD2e-129463
NC_018677:111500:1414281414281431641737Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRNA polymerase sigma factor RpoD7e-129461
NC_010676:2869936:2882060288206028840571998Burkholderia phytofirmans PsJN chromosome 2, complete sequenceRNA polymerase, sigma 70 subunit, RpoD6e-124445
NC_009952:2381601:2381601238160123835951995Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase sigma factor4e-120432
NC_009465:90000:1217341217341235451812Candidatus Vesicomyosocius okutanii HA, complete genomeDNA-directed RNA polymerase sigma-70 factor5e-115415
NC_014623:7331860:7336519733651973386392121Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma factor rpod1e-111404
NC_016626:1669477:1686194168619416881401947Burkholderia sp. YI23 plasmid byi_1p, complete sequenceRNA polymerase sigma-70 subunit RpoD5e-105382
NC_016629:3396500:3420075342007534218591785Desulfovibrio africanus str. Walvis Bay chromosome, completeRpoD subfamily RNA polymerase sigma-70 subunit1e-101371
NC_012034:802453:8024538024538037061254Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily4e-97355
NC_007644:626992:6482906482906493751086Moorella thermoacetica ATCC 39073, complete genomesigma 38 (RpoS)5e-94345
NC_006322:2592176:2607296260729626084171122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor8e-94345
NC_008054:1030994:1053267105326710543851119Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor RpoD (Sigma-A)2e-93343
NC_006270:2591317:2606437260643726075581122Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sigma factor2e-93343
NC_008529:1042220:1071584107158410727021119Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)3e-92340
NC_010424:531727:5317275317275328091083Candidatus Desulforudis audaxviator MP104C, complete genomeRNA polymerase, sigma 70 subunit, RpoD family8e-92338
NC_014220:1670000:1685266168526616863511086Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-91337
NC_013171:1194500:1219236121923612210441809Anaerococcus prevotii DSM 20548, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-90334
NC_021182:2219286:2228867222886722299881122Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family1e-90334
NC_014314:755166:7722247722247737321509Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeRNA polymerase sigma 70 subunit RpoD subfamily2e-89330
NC_003366:2286083:2298082229808222992031122Clostridium perfringens str. 13, complete genomeRNA polymerase sigma factor2e-89330
NC_008262:2169262:2181235218123521823351101Clostridium perfringens SM101, complete genomeRNA polymerase sigma factor RpoD2e-89330
NC_011126:1430608:1443052144305214447881737Hydrogenobaculum sp. Y04AAS1, complete genomeRNA polymerase, sigma 70 subunit, RpoD family6e-89328
NC_015555:863173:8722008722008732731074Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-88327
NC_019970:1991944:1999871199987120009441074Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRNA polymerase, sigma 70 subunit, RpoD2e-88327
NC_014393:1782811:1798057179805717991481092Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-88327
NC_015587:1414304:1423388142338814251241737Hydrogenobaculum sp. SHO chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-88327
NC_015557:1412917:1423520142352014252561737Hydrogenobaculum sp. 3684 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-88327
NC_010723:915697:9156979156979168211125Clostridium botulinum E3 str. Alaska E43, complete genomeRNA polymerase sigma factor RpoD9e-88325
NC_014484:1163576:1170458117045811722001743Spirochaeta thermophila DSM 6192 chromosome, complete genomeRNA polymerase sigma factor4e-87323
NC_015713:2453409:2453409245340924550731665Simkania negevensis Z chromosome gsn.131, complete genomerNA polymerase sigma factor rpoD9e-87321
NC_013192:1993718:1993718199371819948961179Leptotrichia buccalis DSM 1135, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-86321
NC_013517:3082279:3083339308333930845021164Sebaldella termitidis ATCC 33386, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily4e-85316
NC_015318:249445:2540152540152554901476Hippea maritima DSM 10411 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-84313
NC_009850:1011293:1014453101445310163331881Arcobacter butzleri RM4018, complete genomeRNA polymerase sigma 70 factor4e-84313
NC_016787:1350676:1402928140292814045201593Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor A1e-82308
NC_016782:1385800:1411361141136114129411581Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor A1e-82308
NC_016783:1397975:1431953143195314335331581Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor A1e-82308
NC_016785:1357500:1389513138951313910931581Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor A1e-82308
NC_016786:1359064:1411626141162614132061581Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor A1e-82308
NC_016799:1439000:1463172146317214647521581Corynebacterium diphtheriae 31A chromosome, complete genomeRNA polymerase sigma factor A1e-82308
NC_016801:1422500:1453156145315614547361581Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor A1e-82308
NC_016802:1317365:1396152139615213977321581Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor A1e-82308
NC_017303:1297793:1320477132047713220301554Corynebacterium pseudotuberculosis I19 chromosome, complete genomeRNA polymerase sigma factor rpoD1e-82307
NC_016781:1297782:1320469132046913220221554Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRNA polymerase sigma factor rpoD1e-82307
NC_016800:1411000:1439503143950314410831581Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor A2e-82307
NC_016788:1376000:1406465140646514079851521Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor A3e-82306
NC_016790:1345638:1379067137906713805871521Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor A3e-82306
NC_002935:1378566:1423091142309114245991509Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor3e-82306
NC_013510:1849751:1870803187080318724821680Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily5e-82305
NC_009921:5202607:5225702522570252269041203Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma 70 subunit, RpoD family9e-82305
NC_016789:1432000:1456893145689314584461554Corynebacterium diphtheriae PW8 chromosome, complete genomeRNA polymerase sigma factor A1e-81305
NC_013715:767722:7816667816667830481383Rothia mucilaginosa DY-18, complete genomeDNA-directed RNA polymerase, sigma subunit1e-80301
NC_010673:703816:7554327554327573241893Borrelia hermsii DAH, complete genomeRNA polymerase sigma factor RpoD1e-80301
NC_008710:703740:7526687526687545601893Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoD3e-80300
NC_011244:746801:7669497669497688411893Borrelia recurrentis A1, complete genomeRNA polymerase sigma factor RpoD2e-79297
NC_007974:1135863:1146392114639211482451854Ralstonia metallidurans CH34 chromosome 2, complete sequencesigma 70 (RpoD)5e-79296
NC_013515:550464:5673445673445684831140Streptobacillus moniliformis DSM 12112, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily2e-78294
NC_009380:1663545:1684802168480216864301629Salinispora tropica CNB-440 chromosome, complete genomeRNA polymerase sigma factor3e-78293
NC_014761:1321187:1321187132118713226411455Oceanithermus profundus DSM 14977 chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily9e-77288
NC_010003:795355:8370528370528382961245Petrotoga mobilis SJ95, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-75283
NC_015957:8677395:8696862869686286981061245Streptomyces violaceusniger Tu 4113 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit7e-74278
NC_011296:909558:9211909211909226291440Thermodesulfovibrio yellowstonii DSM 11347, complete genomeRNA polymerase sigma factor RpoD1e-73278
NC_010296:5002428:5008809500880950100591251Microcystis aeruginosa NIES-843, complete genomeRNA polymerase sigma factor RpoD7e-72272
NC_009380:1663545:166747116674711668469999Salinispora tropica CNB-440 chromosome, complete genomeRNA polymerase sigma factor SigB4e-70266
NC_016783:1397975:143905514390551440044990Corynebacterium diphtheriae INCA 402 chromosome, complete genomeRNA polymerase sigma factor B6e-69262
NC_016789:1432000:146396714639671464956990Corynebacterium diphtheriae PW8 chromosome, complete genomeRNA polymerase sigma factor B6e-69262
NC_002935:1378566:143012114301211431110990Corynebacterium diphtheriae NCTC 13129, complete genomeRNA polymerase sigma factor5e-69262
NC_016782:1385800:141846314184631419452990Corynebacterium diphtheriae 241 chromosome, complete genomeRNA polymerase sigma factor B5e-69262
NC_016785:1357500:139661513966151397604990Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeRNA polymerase sigma factor B5e-69262
NC_016786:1359064:141872814187281419717990Corynebacterium diphtheriae HC01 chromosome, complete genomeRNA polymerase sigma factor B5e-69262
NC_016787:1350676:141004114100411411030990Corynebacterium diphtheriae HC03 chromosome, complete genomeRNA polymerase sigma factor B5e-69262
NC_016802:1317365:140325414032541404243990Corynebacterium diphtheriae HC02 chromosome, complete genomeRNA polymerase sigma factor B5e-69262
NC_016801:1422500:146025714602571461246990Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeRNA polymerase sigma factor B5e-69262
NC_016800:1411000:144660414466041447593990Corynebacterium diphtheriae BH8 chromosome, complete genomeRNA polymerase sigma factor B5e-69262
NC_016790:1345638:138610813861081387097990Corynebacterium diphtheriae VA01 chromosome, complete genomeRNA polymerase sigma factor B5e-69262
NC_016788:1376000:141350614135061414495990Corynebacterium diphtheriae HC04 chromosome, complete genomeRNA polymerase sigma factor B5e-69262
NC_016932:1309644:131240113124011313390990Corynebacterium pseudotuberculosis 316 chromosome, complete genomeRNA polymerase sigma factor sigB2e-68260
NC_016781:1327516:132751613275161328505990Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRNA polymerase sigma factor sigB2e-68260
NC_016799:1439000:147027314702731471262990Corynebacterium diphtheriae 31A chromosome, complete genomeRNA polymerase sigma factor B2e-66254
NC_013525:1953920:1974765197476519765551791Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily7e-65249
NC_013510:2782240:2799999279999928013331335Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily4e-65249
NC_008054:1030994:1052095105209510532311137Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRNA polymerase sigma factor8e-65248
NC_008529:1042220:1070412107041210715481137Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)8e-65248
NC_008700:312099:3187643187643216732910Shewanella amazonensis SB2B, complete genomeDNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein3e-63243
NC_013165:2440883:245653524565352457479945Slackia heliotrinireducens DSM 20476, complete genomeRNA polymerase sigma factor, sigma-70 family3e-62240
NC_019748:4129500:4144777414477741460271251Stanieria cyanosphaera PCC 7437, complete genomeRNA polymerase, sigma subunit, RpsC/SigC2e-61237
NC_007651:72952:9341493414948651452Burkholderia thailandensis E264 chromosome I, complete sequenceRNA polymerase sigma factor RpoD6e-61236
NC_014355:399938:4011424011424024011260Candidatus Nitrospira defluvii, complete genomeRNA polymerase sigma-70 factor8e-61235
NC_014448:487381:5041035041035056771575Mycoplasma hyorhinis HUB-1 chromosome, complete genomeRNA polymerase sigma factor2e-60234
NC_009074:94000:1169431169431183911449Burkholderia pseudomallei 668 chromosome I, complete sequenceRNA polymerase sigma factor RpoD2e-60234
NC_007516:2383097:2407948240794824090811134Synechococcus sp. CC9605, complete genomepossible type II alternative RNA polymerase sigma factor3e-60233
NC_007413:1405817:1426867142686714281171251Anabaena variabilis ATCC 29413, complete genomeRNA polymerase sigma-like factor9e-60231
NC_007604:1586243:161346416134641614396933Synechococcus elongatus PCC 7942, complete genomeprincipal RNA polymerase sigma factor SigA3e-59229
NC_006576:12230:144341443415384951Synechococcus elongatus PCC 6301, complete genomegroup2 RNA polymerase sigma factor RpoD64e-59229
NC_009482:2109270:2130734213073421318461113Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor9e-59228
NC_008312:6801445:6821260682126068224141155Trichodesmium erythraeum IMS101, complete genomeRNA polymerase, sigma 28 subunit3e-58226
NC_008820:2595500:2614605261460526157351131Prochlorococcus marinus str. MIT 9303, complete genomePutative type II alternative RNA polymerase sigma factor9e-58225
NC_009483:3024115:3042895304289530439051011Geobacter uraniireducens Rf4 chromosome, complete genomeRpoD family RNA polymerase sigma factor2e-57224
NC_008268:1748635:1757720175772017592821563Rhodococcus sp. RHA1, complete genomesigma factor, sigma 70 type, probable group 23e-56220
NC_009482:87193:958219582196795975Synechococcus sp. RCC307 chromosome, complete genomesigma-70 family RNA polymerase sigma factor6e-56219
NC_005125:182701:1947391947391958091071Gloeobacter violaceus PCC 7421, complete genomegroup 2 sigma 70-type sigma factor6e-56219
NC_017277:1283477:1300488130048813015971110Synechocystis sp. PCC 6803, complete genomeRNA polymerase sigma factor7e-56219
NC_017052:1283720:1300686130068613017951110Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeRNA polymerase sigma factor7e-56219
NC_017039:1283732:1300698130069813018071110Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeRNA polymerase sigma factor7e-56219
NC_000911:1284552:1301671130167113027801110Synechocystis sp. PCC 6803, complete genomeRNA polymerase sigma factor7e-56219
NC_011146:3089297:3106852310685231078531002Geobacter bemidjiensis Bem, complete genomeRNA polymerase, sigma 70 subunit, RpoD family3e-55217
NC_012918:1814000:1815755181575518167561002Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit5e-55216
NC_007517:1561466:158865115886511589631981Geobacter metallireducens GS-15, complete genomesigma 28 (Flagella/Sporulation)2e-54214
NC_012806:105133:1119901119901135911602Mycoplasma conjunctivae, complete genomeRNA polymerase sigma factor2e-54214
NC_014657:914071:916231916231917052822Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma 70 subunit, rpod subfamily3e-53210
NC_009138:1843998:1860878186087818633042427Herminiimonas arsenicoxydans, complete genome9e-53208
NC_015496:2155816:215908021590802159943864Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-52207
NC_007498:1666242:1677244167724416782871044Pelobacter carbinolicus DSM 2380, complete genomeDNA-directed RNA polymerase, sigma 70/sigma 32 subunit2e-52207
NC_010694:2971170:299977329997733000765993Erwinia tasmaniensis, complete genomeRNA polymerase sigma factor RpoS5e-52206
NC_013961:851044:852228852228853220993Erwinia amylovora, complete genomeRNA polymerase sigma factor rpoS5e-52206
NC_014562:2563466:260248826024882603480993Pantoea vagans C9-1 chromosome, complete genomeRNA polymerase sigma factor rpoD1e-51205
NC_015167:724934:728042728042728905864Cellulophaga lytica DSM 7489 chromosome, complete genomeRpoD subfamily RNA polymerase sigma 70 subunit2e-51204
NC_009831:1539159:154015015401501541121972Shewanella sediminis HAW-EB3, complete genomeRNA polymerase, sigma 70 subunit, RpoD family1e-51204
NC_005042:1719055:1722731172273117237501020Prochlorococcus marinus subsp. marinus str. CCMP1375, completeDNA-directed RNA polymerase sigma subunit1e-51204
NC_012918:2758775:279005027900502791027978Geobacter sp. M21 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit1e-51204
NC_013510:3065000:3081198308119830822801083Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily1e-51204
NC_016510:871000:877846877846878709864Flavobacterium columnare ATCC 49512 chromosome, complete genomeRpoD family RNA polymerase sigma factor1e-51204
NC_018607:1185195:118614611861461187072927Brachyspira pilosicoli B2904 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit4e-51203
NC_018604:1385788:138578813857881386714927Brachyspira pilosicoli WesB complete genomeRNA polymerase sigma factor RpoD4e-51203
NC_019908:748635:781082781082782008927Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma factor RpoD4e-51203
NC_014330:2457731:245868224586822459626945Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma factor RpoD4e-51203
NC_005070:2374850:239942623994262400412987Synechococcus sp. WH 8102, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family3e-51203
NC_016818:749673:750744750744751730987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRNA polymerase sigma factor RpoS6e-51202
NC_015638:591964:593277593277594140864Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit9e-51202
NC_010995:2547164:2553509255350925545161008Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma factor RpoS2e-50201
NC_015164:325212:344338344338345198861Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA polymerase, sigma 70 subunit, RpoD subfamily3e-50200
NC_009614:3476000:349491834949183495778861Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA polymerase sigma factor rpoD2e-50200
NC_009091:1598044:1616615161661516176341020Prochlorococcus marinus str. MIT 9301, complete genomeType II alternative RNA polymerase sigma factor, sigma-70 family2e-50200
NC_015138:5046921:5053585505358550562212637Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRpoD subfamily RNA polymerase sigma-70 subunit6e-50199
NC_015672:2236000:225557622555762256508933Flexistipes sinusarabici DSM 4947 chromosome, complete genomeRpoD subfamily RNA polymerase sigma-70 subunit8e-50198
NC_003228:3212500:321592932159293216789861Bacteroides fragilis NCTC 9343, complete genomeputative sigma factor A2e-49197
NC_004578:1719849:1727080172708017280871008Pseudomonas syringae pv. tomato str. DC3000, complete genomeRNA polymerase sigma factor3e-49196
NC_012751:1538500:1553846155384615548531008Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeRNA polymerase, sigma S (sigma 38) factor6e-47189
NC_008702:1153344:117263311726331173568936Azoarcus sp. BH72, complete genomeputative RNA polymerase sigma factor3e-43177
NC_015684:362236:3723743723743735401167Oligotropha carboxidovorans OM5 chromosome, complete genome3e-43177
NC_011386:136223:1551691551691563321164Oligotropha carboxidovorans OM5, complete genomeRNA polymerase sigma factor RpoD3e-43177
NC_014393:4352216:4355487435548743567701284Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma 32 subunit, RpoH4e-43176
NC_011661:1332309:1332309133230913335501242Dictyoglomus turgidum DSM 6724, complete genomeputative RNA polymerase, sigma 70 family subunit2e-42174
NC_009523:2769154:2779011277901127802071197Roseiflexus sp. RS-1 chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH5e-42173
NC_009930:4909:293182931830124807Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceRNA polymerase sigma-70 factor1e-40168
NC_007298:2689731:271902027190202719949930Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma factor2e-40167
NC_010118:207843:2067912067912078461056Candidatus Sulcia muelleri GWSS, complete genomeRNA polymerase sigma factor rpoD4e-40166
NC_014962:4479989:449534144953414496174834Isosphaera pallida ATCC 43644 chromosome, complete genomeRNA polymerase sigma-38 subunit RpoS5e-40166
NC_013894:1380564:140102114010211401953933Thermocrinis albus DSM 14484 chromosome, complete genomeputative RNA polymerase, sigma 70 family subunit8e-40165
NC_007410:112074:126026126026126970945Anabaena variabilis ATCC 29413 plasmid A, complete sequenceSigma-703e-39163
NC_019908:2496149:250468525046852505539855Brachyspira pilosicoli P43/6/78 chromosome, complete genomeDNA directed RNA polymerase sigma subunit9e-39162
NC_014330:697429:713067713067713921855Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA directed RNA polymerase sigma subunit9e-39162
NC_009929:58465:800918009180900810Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceRNA polymerase sigma-70 factor, putative6e-39162
NC_014311:1:77257725104482724Ralstonia solanacearum PSI07 chromosome, complete genomeRNA polymerase sigma factor7e-38159
NC_008686:2080770:2085415208541520876012187Paracoccus denitrificans PD1222 chromosome 1, complete sequenceRNA polymerase, sigma 32 subunit, RpoH2e-31137
NC_020908:1889759:1893970189397018961262157Octadecabacter arcticus 238, complete genomeputative RNA polymerase sima factor9e-28125
NC_007760:1415663:141749914174991418467969Anaeromyxobacter dehalogenans 2CP-C, complete genomesigma 32 (RpoH)1e-27125
NC_011891:3004000:301729530172953018263969Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma 32 subunit, RpoH5e-27123
NC_008710:819389:820347820347821150804Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoS1e-26122
NC_010814:155834:170098170098170940843Geobacter lovleyi SZ, complete genomeputative RNA polymerase, sigma 70 family subunit2e-22107
NC_011761:2067695:208789920878992088756858Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeRNA polymerase sigm-70 factor family4e-22107
NC_017249:2073558:207916620791662080077912Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein8e-22105
NC_008609:112340:130809130809131687879Pelobacter propionicus DSM 2379, complete genomeRNA polymerase, sigma 32 subunit, RpoH3e-21103
NC_020291:1389114:139335713933571394130774Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-G factor SigG1e-20102
NC_010725:4618000:462237446223744623246873Methylobacterium populi BJ001, complete genomeRNA polymerase, sigma 32 subunit, RpoH1e-20102
NC_008578:591357:595878595878596741864Acidothermus cellulolyticus 11B, complete genomeRNA polymerase, sigma 28 subunit3e-20100
NC_015275:1034230:104721210472121048036825Clostridium lentocellum DSM 5427 chromosome, complete genomeRNA polymerase, sigma 32 subunit, RpoH4e-20100
NC_011662:1160887:116325211632521164103852Thauera sp. MZ1T, complete genomeRNA polymerase, sigma 32 subunit, RpoH5e-20100
NC_013595:9149273:916531191653119166111801Streptosporangium roseum DSM 43021, complete genomeputative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily6e-2099.8
NC_010125:2295500:231102723110272312004978Gluconacetobacter diazotrophicus PAl 5, complete genomeputative RNA polymerase sigma-32 factor9e-2099
NC_009485:7021228:704376170437617044660900Bradyrhizobium sp. BTAi1 chromosome, complete genomeRNA polymerase factor sigma-329e-2099
NC_011365:502620:519355519355520242888Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeRNA polymerase factor sigma-321e-1998.6
NC_008783:119758:141073141073141984912Bartonella bacilliformis KC583, complete genomeRNA polymerase sigma-32 factor2e-1998.2
NC_014220:837926:842737842737843507771Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily3e-1997.4
NC_014623:4535544:457504845750484575938891Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA polymerase sigma-b factor3e-1997.4
NC_009445:1453132:145613414561341457033900Bradyrhizobium sp. ORS 278 chromosome, complete genomeRNA polymerase factor sigma-323e-1997.1
NC_008699:1816392:181882118188211819633813Nocardioides sp. JS614, complete genomesigma-70 region 2 domain protein5e-1996.7
NC_016109:5455060:5471736547173654728181083Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor5e-1996.7
NC_009675:2515669:251566925156692516394726Anaeromyxobacter sp. Fw109-5 chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH6e-1996.3
NC_010505:5967324:597047859704785971371894Methylobacterium radiotolerans JCM 2831, complete genomeRNA polymerase, sigma 32 subunit, RpoH7e-1996.3
NC_004310:1578918:160019816001981601109912Brucella suis 1330 chromosome I, complete sequenceRNA polymerase sigma factor8e-1995.9
NC_015857:1609670:163095016309501631861912Brucella pinnipedialis B2/94 chromosome chromosome 1, completeRNA polymerase factor sigma-328e-1995.9
NC_010103:1577750:159903115990311599942912Brucella canis ATCC 23365 chromosome I, complete sequencealternative sigma factor RpoH8e-1995.9
NC_013009:270000:291112291112291978867Neorickettsia risticii str. Illinois, complete genomeRNA polymerase sigma-32 factor (RpoH)1e-1895.5
NC_014366:2393702:239507623950762395933858Gamma proteobacterium HdN1, complete genomeRNA polymerase sigma factor1e-1895.5
NC_007404:359764:363361363361364206846Thiobacillus denitrificans ATCC 25259, complete genomesigma-70 factor1e-1895.5
NC_007618:1593886:161517016151701616081912Brucella melitensis biovar Abortus 2308 chromosome I, completeSigma-70 factor family:Sigma-70 region 2:Sigma-70 region 42e-1895.1
NC_006932:1596732:161801416180141618925912Brucella abortus biovar 1 str. 9-941 chromosome I, completeRNA polymerase sigma factor2e-1895.1
NC_010742:1595065:161634716163471617258912Brucella abortus S19 chromosome 1, complete sequenceSigma-70 factor family2e-1895.1
NC_007798:260324:279854279854280720867Neorickettsia sennetsu str. Miyayama, complete genomeRNA polymerase sigma-32 factor2e-1894.7
NC_016593:2370000:239025823902582391010753Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeRNA polymerase sigma-F factor3e-1894.4
NC_011969:3627980:365313136531313654000870Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sigg5e-1893.6
NC_007760:1806136:182872918287291829454726Anaeromyxobacter dehalogenans 2CP-C, complete genomesigma 32 (RpoH)6e-1893.2
NC_011145:2543321:254626525462652546990726Anaeromyxobacter sp. K, complete genomeRNA polymerase, sigma 32 subunit, RpoH6e-1893.2
NC_011891:2607812:261038326103832611108726Anaeromyxobacter dehalogenans 2CP-1, complete genomeRNA polymerase, sigma 32 subunit, RpoH6e-1893.2
NC_015589:3085442:308799830879983088780783Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRNA polymerase sigma-F factor1e-1792.4
NC_017195:2273216:229212822921282292895768Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRNA polymerase sigma-F factor1e-1792
NC_010172:1079127:107912710791271080020894Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor RpoH1e-1792
NC_009454:1246393:126549412654941266273780Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit2e-1791.7
NC_008601:1151653:115361411536141154492879Francisella tularensis subsp. novicida U112, complete genomeRNA polymerase sigma-32 factor2e-1791.3
NC_014313:2059933:206294420629442063834891Hyphomicrobium denitrificans ATCC 51888 chromosome, completeRNA polymerase, sigma 32 subunit, RpoH4e-1790.5
NC_014932:1387818:138931913893191390230912Bartonella clarridgeiae 73, complete genomeRNA polymerase sigma-32 factor4e-1790.1
NC_007354:569321:571776571776572678903Ehrlichia canis str. Jake, complete genomeSigma-70 region 2:Sigma-70 region 49e-1789.4
NC_009952:2752500:277254127725412773437897Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase8e-1789.4
NC_017262:623351:625601625601626509909Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completeRNA polymerase sigma-32 subunit RpoH3e-1687.4
NC_020911:349610:353922353922354782861Octadecabacter antarcticus 307, complete genomeRNA polymerase sigma 32 factor RpoH4e-1687
NC_014377:1227850:123522212352221235947726Thermosediminibacter oceani DSM 16646 chromosome, complete genomeRNA polymerase, sigma subunit, RpoX/SigF4e-1687
NC_007103:198500:211335211335212306972Bacillus cereus E33L plasmid pE33L466, complete sequenceRNA polymerase sigma factor (sigma-A) (sigma-43)5e-1686.7
NC_013960:2261487:227817022781702279033864Nitrosococcus halophilus Nc4 chromosome, complete genomeRNA polymerase sigma factor RpoH8e-1685.9
NC_021177:4221309:422711342271134228033921Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor1e-1585.5
NC_014172:53815:697826978270753972Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequenceRNA polymerase sigma-43 factor2e-1585.1
NC_012779:3570720:358928535892853590139855Edwardsiella ictaluri 93-146, complete genomealternative sigma factor RpoH, putative3e-1584.3
NC_010002:1879220:188397618839761884920945Delftia acidovorans SPH-1, complete genomeRNA polymerase, sigma 32 subunit, RpoH3e-1584
NC_011898:426951:452033452033452782750Clostridium cellulolyticum H10, complete genomeRNA polymerase, sigma 28 subunit, Sig B/F/G subfamily4e-1583.6
NC_009932:39348:5824858248595191272Acaryochloris marina MBIC11017 plasmid pREB7, complete sequenceRNA polymerase sigma-24 subunit7e-1582.8
NC_005295:689500:690509690509691399891Ehrlichia ruminantium str. Welgevonden, complete genomeRNA polymerase sigma-32 factor9e-1582.4
NC_007799:647514:670231670231671124894Ehrlichia chaffeensis str. Arkansas, complete genomeRNA polymerase sigma-32 factor1e-1482
NC_013595:3388000:338860033886003389376777Streptosporangium roseum DSM 43021, complete genomeputative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily1e-1482
NC_021177:4221309:422601242260124226878867Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor3e-1480.9
NC_009656:475465:480115480115480969855Pseudomonas aeruginosa PA7 chromosome, complete genomeRNA polymerase factor sigma-324e-1480.5
NC_004545:15650:266692666927532864Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeRNA polymerase sigma factor4e-1480.5
NC_015312:3675148:372328137232813724171891Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeSigB/F/G subfamily RNA polymerase sigma-28 subunit6e-1479.7
NC_018677:111500:115439115439116281843Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeRNA polymerase sigma factor RpoH2e-1378.2
NC_018507:115346:121872121872122714843Candidatus Portiera aleyrodidarum BT-B chromosome, complete genomeRNA polymerase sigma-32 subunit RpoH2e-1378.2
NC_011742:3799788:381378338137833814637855Escherichia coli S88 chromosome, complete genomeRNA polymerase factor sigma-323e-1377.4
NC_008563:3888232:389904338990433899897855Escherichia coli APEC O1, complete genomeRNA polymerase sigma factor3e-1377.4
NC_007946:3855445:386624838662483867102855Escherichia coli UTI89, complete genomecomponent of RNA polymerase, sigma 32 factor3e-1377.4
NC_013159:2913927:292880029288002929600801Saccharomonospora viridis DSM 43017, complete genomeRNA polymerase sigma factor, sigma-70 family4e-1377
NC_018664:1:9917991710708792Clostridium acidurici 9a chromosome, complete genomeRNA polymerase factor sigma-70 RpoD5e-1376.6
NC_015662:15641:174671746718342876Buchnera aphidicola (Cinara tujafilina) chromosome, completeRNA polymerase sigma-32 factor8e-1376.3
NC_006831:664000:666015666015666974960Ehrlichia ruminantium str. Gardel, complete genomeRNA polymerase sigma-32 factor8e-1376.3
NC_006832:668913:670354670354671316963Ehrlichia ruminantium str. Welgevonden, complete genomeRNA polymerase sigma-32 factor8e-1376.3
NC_016109:785819:791016791016791861846Kitasatospora setae KM-6054, complete genomeputative RNA polymerase sigma factor8e-1376.3
NC_016048:2734563:275766727576672758377711Oscillibacter valericigenes Sjm18-20, complete genomeputative RNA polymerase sigma factor7e-1376.3
NC_017243:1499757:151441615144161515243828Brachyspira intermedia PWS/A chromosome, complete genomeRNA polymerase sigma factor WhiG1e-1275.5
NC_015581:1791658:179242117924211793278858Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeRNA polymerase, sigma 32 subunit, RpoH2e-1275.1
NC_009012:3421000:342571634257163426474759Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma 28 subunit2e-1275.1
NC_006270:2657726:266171326617132662438726Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase sporulation-specific sigma factor (sigma-K) (C-terminal half)2e-1274.7
NC_006322:2658587:266257426625742663299726Bacillus licheniformis ATCC 14580, complete genomeSpoIIIC2e-1274.7
NC_009922:1:102491024911061813Alkaliphilus oremlandii OhILAs, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG family3e-1273.9
NC_014150:233194:241288241288242106819Brachyspira murdochii DSM 12563 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG4e-1273.9
NC_005125:2811986:283022128302212830985765Gloeobacter violaceus PCC 7421, complete genomesigma factor SigF4e-1273.9
NC_012225:377441:389172389172389999828Brachyspira hyodysenteriae WA1, complete genomeRNA polymerase sigma factor WhiG5e-1273.6
NC_020291:4903981:491882649188264919557732Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma factor for flagellar operon5e-1273.6
NC_014328:1135854:115073211507321151457726Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeRNA polymerase sigma factor for flagellar operon FliA7e-1273.2
NC_017195:2498113:250061925006192501347729Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeRNA polymerase sigma-K factor7e-1272.8
NC_014479:2505823:250902725090272509755729Bacillus subtilis subsp. spizizenii str. W23 chromosome, completesporulation sigma factor SigmaK7e-1272.8
NC_016047:2631511:263408426340842634812729Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeRNA polymerase sigma-K factor7e-1272.8
NC_008513:13484:161811618117056876Buchnera aphidicola str. Cc (Cinara cedri), complete genomeRNA polymerase sigma-32 factor1e-1172
NC_014614:6115:116041160412425822Clostridium sticklandii, complete genomeRNA polymerase sigma-37 factor (sigma-B)2e-1171.6
NC_009725:2517428:252185025218502522572723Bacillus amyloliquefaciens FZB42, complete genomeSpoIIIC2e-1171.6
NC_020410:2509057:251185125118512512573723Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase sigma-K factor2e-1171.6
NC_014551:2510000:251515725151572515879723Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase sporulation-specific sigma-K factor precursor (Sigma-27) (C-terminal fragment)2e-1171.6
NC_020272:1384525:140054414005441401266723Bacillus amyloliquefaciens IT-45, complete genomesporulation sigma factor SigK2e-1171.6
NC_009929:3923:2255322553238751323Acaryochloris marina MBIC11017 plasmid pREB4, complete sequenceRNA polymerase sigma factor2e-1171.6
NC_017188:2512357:251601825160182516743726Bacillus amyloliquefaciens TA208 chromosome, complete genomesporulation sigma factor SigK2e-1171.6
NC_017191:2514401:251805925180592518787729Bacillus amyloliquefaciens XH7 chromosome, complete genomesporulation sigma factor SigK2e-1171.6
UCMB5137:2054735:206023320602332060961729Bacillus atrophaeus UCMB-5137sporulation sigma factor SigK2e-1171.6
CP002207:2169277:217149621714962172224729Bacillus atrophaeus 1942, complete genomesporulation sigma factor SigK2e-1171.6
NC_014639:2169277:217149621714962172224729Bacillus atrophaeus 1942 chromosome, complete genomesporulation sigma factor SigK2e-1171.6
NC_014538:1311500:133260513326051333345741Thermoanaerobacter sp. X513 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily2e-1171.6
NC_015222:1127675:112857711285771129293717Nitrosomonas sp. AL212 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-1171.2
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome3e-1170.9
NC_008346:584305:613841613841614575735Syntrophomonas wolfei subsp. wolfei str. Goettingen, completesigma 28 (flagella/sporulation)4e-1170.5
NC_018604:1329228:133817613381761338988813Brachyspira pilosicoli WesB complete genomeRNA polymerase sigma factor5e-1170.1
NC_014330:2409559:242009924200992420911813Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma factor5e-1170.1
NC_019908:852230:859282859282860094813Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma factor WhiG5e-1170.1
NC_018607:1134900:114385311438531144665813Brachyspira pilosicoli B2904 chromosome, complete genomeRNA polymerase sigma factor5e-1170.1
NC_003155:883500:890067890067890906840Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma factor6e-1170.1
NC_007298:778723:816228816228816974747Dechloromonas aromatica RCB, complete genomeSigma-70 region 41e-1068.6
NC_007644:1603696:161628816162881616968681Moorella thermoacetica ATCC 39073, complete genomesigma 28 (Flagella/Sporulation)1e-0965.9
NC_009089:1:9857985710630774Clostridium difficile 630, complete genomeRNA polymerase sigma-B factor1e-0965.9
NC_013316:1:9857985710630774Clostridium difficile R20291, complete genomeRNA polymerase sigma-B factor1e-0965.9
NC_014219:567033:568900568900569706807Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, LuxR family1e-0965.5
NC_013956:2523955:252451025245102525232723Pantoea ananatis LMG 20103 chromosome, complete genomeFliA1e-0965.5
NC_016816:1912366:194426019442601944982723Pantoea ananatis LMG 5342, complete genomeRNA polymerase sigma factor for flagellar operon1e-0965.5
NC_019978:2036779:205421120542112054906696Halobacteroides halobius DSM 5150, complete genomeRNA polymerase sigma-K factor1e-0965.5
NC_014328:1307490:132611813261181326819702Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative RNA polymerase sigma-K factor2e-0965.1
NC_016514:2950860:295907129590712959790720Enterobacter cloacae EcWSU1 chromosome, complete genomeRNA polymerase sigma factor for flagellar operon2e-0964.7
NC_009930:152500:1724641724641737471284Acaryochloris marina MBIC11017 plasmid pREB5, complete sequencehypothetical protein2e-0964.7
NC_014220:837926:841866841866842591726Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily2e-0964.7
NC_020291:1389114:139256713925671393274708Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-E factor SigE4e-0963.9
NC_014033:395000:418221418221418937717Prevotella ruminicola 23 chromosome, complete genomeputative sigma factor4e-0963.5
NC_020409:168916:180363180363181148786Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeRNA polymerase sigma factor for flagellar operon6e-0963.2
NC_021508:775264:777368777368778156789Treponema pallidum subsp. pallidum SS14, complete genomeDNA-directed RNA polymerase sigma subunit WhiG7e-0963.2
NC_017268:775000:777138777138777926789Treponema pallidum subsp. pallidum str. Chicago chromosome,RNA polymerase sigma factor WhiG7e-0963.2
NC_016844:775334:777826777826778614789Treponema pallidum subsp. pallidum DAL-1 chromosome, completeDNA-directed RNA polymerase sigma subunit WhiG7e-0963.2
NC_010741:775000:777336777336778124789Treponema pallidum subsp. pallidum SS14, complete genomeRNA polymerase sigma-28 factor7e-0963.2
NC_000919:773784:775888775888776676789Treponema pallidum subsp. pallidum str. Nichols, complete genomesigma factor WhiG7e-0963.2
NC_012778:841934:853378853378854136759Eubacterium eligens ATCC 27750, complete genomephosphatidylserine decarboxylase9e-0962.8
NC_012440:659646:677627677627678256630Persephonella marina EX-H1, complete genomeRNA polymerase sigma factor for flagellar operon8e-0962.8
NC_007759:1356439:136476413647641365549786Syntrophus aciditrophicus SB, complete genomeRNA polymerase flagellar sigma factor9e-0962.4
NC_009930:152500:1650481650481664781431Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceRNA polymerase sigma factor domain protein1e-0862.4
NC_011969:3627980:365406836540683654787720Bacillus cereus Q1 chromosome, complete genomesporulation sigma factor sige1e-0862
NC_012912:1788308:181042918104291811151723Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-0861.6
NC_018704:347948:352252352252353040789Amphibacillus xylanus NBRC 15112, complete genomeRNA polymerase sigma-B factor2e-0861.6
NC_012880:1765920:184124818412481841970723Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-0861.6
NC_014721:2135500:214805921480592148679621Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeRNA polymerase, sigma 70 family subunit3e-0861.2
NC_004193:375416:655820655820656611792Oceanobacillus iheyensis HTE831, complete genomesigma factor B3e-0861.2
NC_014500:3023762:303527230352723035994723Dickeya dadantii 3937 chromosome, complete genomeRNA polymerase sigma-28 (sigma F) factor2e-0861.2
NC_006582:2944237:298160629816062982268663Bacillus clausii KSM-K16, complete genomeDNA-directed RNA polymerase sigma factor3e-0860.8
NC_004547:1970686:198611819861181986840723Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar biosynthesis sigma factor FliA4e-0860.5
NC_015714:768500:770767770767771555789Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeDNA-directed RNA polymerase sigma subunit WhiG4e-0860.5
NC_016842:775368:777472777472778260789Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeDNA-directed RNA polymerase sigma subunit WhiG4e-0860.5
NC_016843:775371:777659777659778447789Treponema pallidum subsp. pertenue str. Gauthier chromosome,DNA-directed RNA polymerase sigma subunit WhiG4e-0860.5
NC_016848:775822:777926777926778714789Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeDNA-directed RNA polymerase sigma subunit WhiG4e-0860.5
NC_021184:2238500:225056522505652251368804Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, FliA/WhiG family4e-0860.5
NC_013592:1730505:174909117490911749813723Dickeya dadantii Ech586, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily5e-0860.1
NC_011653:1728000:174502817450281745708681Thermosipho africanus TCF52B, complete genomeRNA polymerase sigma factor for flagellar operon9e-0859.3
NC_012559:731859:747206747206747949744Laribacter hongkongensis HLHK9, complete genomeFliA12e-0758.2
NC_006177:3192500:320519732051973205958762Symbiobacterium thermophilum IAM 14863, complete genomeRNA polymerase sigma factor related to flagellar biosynthesis2e-0758.2
NC_009654:3849774:387059938705993871336738Marinomonas sp. MWYL1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-0757.8
NC_010516:2676746:271203727120372712471435Clostridium botulinum B1 str. Okra, complete genomeRNA polymerase sigma-K factor2e-0757.8
NC_009928:23424:3871638716408092094Acaryochloris marina MBIC11017 plasmid pREB3, complete sequenceRNA polymerase sigma-2 subunit domain protein3e-0757.8
NC_017095:166896:191492191492192247756Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeRNA polymerase, sigma 28 subunit, SigD/FliA/WhiG3e-0757.8
NC_012779:2281700:229874322987432299465723Edwardsiella ictaluri 93-146, complete genomeRNA polymerase sigma factor for flagellar operon4e-0757.4
NC_016894:2931213:293121329312132932046834Acetobacterium woodii DSM 1030 chromosome, complete genomeRNA polymerase, sigma 28 subunit FliA3e-0757.4
NC_015224:2017781:203906520390652039787723Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar biosynthesis sigma factor3e-0757.4
NC_008800:2695977:271399427139942714716723Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar biosynthesis sigma factor3e-0757.4
NC_019842:484933:485381485381486169789Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,RNA polymerase sigma factor SigB5e-0757
NC_009725:496443:497217497217498005789Bacillus amyloliquefaciens FZB42, complete genomeSigB5e-0757
NC_020410:495184:495958495958496746789Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase sigma-B factor5e-0757
NC_014551:483773:484547484547485335789Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase sigma-37 factor (sigma(B))5e-0757
NC_017188:461177:461951461951462739789Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigB5e-0757
NC_017190:466236:466684466684467472789Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma-37 factor (sigma(B))5e-0757
NC_017191:467207:467981467981468769789Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigB5e-0757
NC_021177:6127431:614515861451586145994837Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase sigma factor WhiG4e-0757
NC_020911:2921925:295782329578232958542720Octadecabacter antarcticus 307, complete genomeRNA polymerase sigma factor for flagellar operon4e-0757
NC_010572:2216309:221630922163092217145837Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative RNA polymerase sigma factor WhiG6e-0756.6
NC_009926:34848:3484834848360501203Acaryochloris marina MBIC11017 plasmid pREB1, complete sequenceRNA polymerase sigma factor domain protein5e-0756.6
NC_012917:2921932:292819629281962928918723Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG7e-0756.2
NC_012121:1578190:159385115938511594621771Staphylococcus carnosus subsp. carnosus TM300, complete genomesigma factor B9e-0755.8
NC_014976:627935:631089631089631556468Bacillus subtilis BSn5 chromosome, complete genomesporulation sigma factor SigK1e-0655.8
NC_008346:983816:996574996574997356783Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeputative RNA polymerase sigma factor1e-0655.5
NC_019842:2575000:257786225778622578509648Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,sporulation sigma factor SigK1e-0655.5
NC_021182:2883716:289082828908282891553726Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, FliA/WhiG family2e-0655.1
NC_017986:4374979:439493843949384395678741Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis sigma factor2e-0654.7
NC_002947:4931476:493147649314764932216741Pseudomonas putida KT2440, complete genomeflagellar biosynthesis sigma factor FliA2e-0654.7
NC_009512:1691930:171188917118891712629741Pseudomonas putida F1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG2e-0654.7
NC_016047:637778:639621639621640409789Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeRNA polymerase sigma-B factor2e-0654.7
NC_007492:1735595:175314617531461753886741Pseudomonas fluorescens PfO-1, complete genomeflagellar biosynthesis sigma factor FliA3e-0654.3
NC_014976:2735423:273726627372662738054789Bacillus subtilis BSn5 chromosome, complete genomeRNA polymerase sigma factor SigB3e-0654.3
NC_000964:521975:522417522417523211795Bacillus subtilis subsp. subtilis str. 168, complete genomesigma factor B3e-0654.3
NC_014479:509919:510693510693511481789Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeRNA polymerase sigma factor SigB4e-0653.9
NC_010001:3266561:327511932751193275883765Clostridium phytofermentans ISDg, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG4e-0653.9
NC_019896:3491000:351722135172213518015795Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeRNA polymerase sigma factor SigB5e-0653.5
NC_011126:922182:921448921448922185738Hydrogenobaculum sp. Y04AAS1, complete genomeRNA polymerase, sigma 28 subunit, FliA/WhiG5e-0653.5
NC_006582:883922:886206886206886991786Bacillus clausii KSM-K16, complete genomesigma factor B4e-0653.5
NC_015687:2145452:216033421603342161074741Clostridium acetobutylicum DSM 1731 chromosome, complete genomeDNA-dependent RNA polymerase sigma subunit4e-0653.5
NC_017208:694500:706239706239706970732Bacillus thuringiensis serovar chinensis CT-43 chromosome, completesporulation sigma factor SigF7e-0653.1
NC_015573:1979202:198377519837751984194420Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeFliA/WhiG subfamily RNA polymerase sigma-28 subunit8e-0652.8
NC_004129:1848701:187106618710661871806741Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis sigma factor FliA9e-0652.8
NC_008209:761487:7828077828077858243018Roseobacter denitrificans OCh 114, complete genomeRNA polymerase sigma factor, putative1e-0552.4