Pre_GI: BLASTP Hits

Some Help

Query: NC_007925:4355413:4381145 Rhodopseudomonas palustris BisB18, complete genome

Start: 4381145, End: 4386100, Length: 4956

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007958:2370619:2376912237691223816694758Rhodopseudomonas palustris BisB5, complete genomeATPase3e-146520
NC_011004:2457778:2464559246455924693164758Rhodopseudomonas palustris TIE-1, complete genomeNERD domain protein3e-146520
NC_007949:121747:1311081311081359704863Polaromonas sp. JS666 plasmid 1, complete sequenceSuperfamily I DNA and RNA helicases and helicase subunits-like6e-129463
NC_014394:707305:7182267182267231904965Gallionella capsiferriformans ES-2 chromosome, complete genomeNERD domain-containing protein4e-121437
NC_016831:2667561:2698569269856927007282160Salmonella enterica subsp. enterica serovar Gallinarum/pullorumNERD domain-containing protein2e-89331
NC_011000:1397611:1428615142861514334864872Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein3e-83311
NC_007645:7136956:7154626715462671595904965Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase and helicase subunit5e-80300
NC_006370:1810842:1805869180586918108454977Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical protein4e-70267
NC_006370:1810842:1818063181806318230244962Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical protein2e-63246
NC_012731:600518:6093686093686143234956Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-57226
NC_012779:346998:3701113701113750724962Edwardsiella ictaluri 93-146, complete genomehypothetical protein8e-58226
NC_012691:2097287:2102959210295921079294971Tolumonas auensis DSM 9187, complete genomeNERD domain protein8e-54213
NC_012654:237175:2407082407082438603153Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequenceprotein kinase domain protein1e-21107
NC_014623:2962330:2976897297689729804153519Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeprotein kinase5e-20101
NC_015711:8964410:8988065898806589915833519Myxococcus fulvus HW-1 chromosome, complete genomeprotein kinase8e-20100
NC_008312:3923071:3938984393898439439454962Trichodesmium erythraeum IMS101, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-like6e-1997.8
NC_014228:3505320:350729335072933507757465Xenorhabdus nematophila ATCC 19061, complete genome2e-1895.9
NC_017068:1450049:1451482145148214550603579Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein4e-1688.6
NC_014933:3942156:3949999394999939519541956Bacteroides helcogenes P 36-108 chromosome, complete genomehelicase1e-1587
NC_014228:3505320:350787435078743508407534Xenorhabdus nematophila ATCC 19061, complete genome3e-1585.9
NC_008758:143907:1804521804521843063855Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completeSuperfamily I DNA and RNA helicases and helicase subunits-like protein1e-1483.6
NC_014640:2693060:2701831270183127035911761Achromobacter xylosoxidans A8 chromosome, complete genomesuperfamily I DNA and RNA helicases and helicase subunits-like protein3e-1482.4
NC_016776:1470596:1472902147290214768103909Bacteroides fragilis 638R, complete genomehypothetical protein4e-1482
NC_010170:4463000:4503816450381645071963381Bordetella petrii, complete genomehypothetical protein7e-1480.9
NC_010002:4572573:4589202458920245925823381Delftia acidovorans SPH-1, complete genomeAAA ATPase7e-1480.9
NC_015311:403281:4078594078594097781920Prevotella denticola F0289 chromosome, complete genomehypothetical protein2e-1379.3
NC_015277:3351504:3356971335697133588631893Sphingobacterium sp. 21 chromosome, complete genomeAAA ATPase4e-1378.6
NC_008757:111292:1320491320491353753327Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeSuperfamily I DNA and RNA helicases and helicase subunits-like protein6e-1377.8
NC_013720:1605240:1630319163031916322381920Pirellula staleyi DSM 6068, complete genomeAAA ATPase2e-1276.3
NC_009615:1305678:1305678130567813076001923Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase3e-1275.9
NC_006396:320853:3224483224483246732226Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceDNA binding protein eukaryotic-like4e-1275.1
NC_012108:1694817:1696283169628316996063324Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein3e-1172.4
NC_009953:3509229:3512609351260935154342826Salinispora arenicola CNS-205 chromosome, complete genomeputative helicase5e-1171.6
NC_000961:801902:8181038181038200731971Pyrococcus horikoshii OT3, complete genomeDNA-binding protein7e-1171.2
NC_013410:2691437:2701566270156627047123147Fibrobacter succinogenes subsp. succinogenes S85 chromosome,Superfamily I DNA and RNA helicase and helicase subunits-like protein2e-1069.7
NC_008698:903759:9088359088359107241890Thermofilum pendens Hrk 5, complete genomeAAA ATPase4e-1068.6
NC_015954:1437544:1437544143754414403212778Halophilic archaeon DL31 chromosome, complete genomeCRISPR-associated protein Cas45e-1068.6
NC_000915:453958:4650454650454661271083Helicobacter pylori 26695, complete genomehypothetical protein1e-0863.9
NC_018939:454000:4649874649874661321146Helicobacter pylori 26695 chromosome, complete genomehypothetical protein2e-0863.2
NC_003888:7337453:7348537734853773532104674Streptomyces coelicolor A3(2), complete genomeprotein kinase3e-0862
NC_014298:251783:270902270902271726825Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceDNA binding protein -like protein3e-0862