Pre_GI: BLASTP Hits

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Query: NC_007925:4294472:4296981 Rhodopseudomonas palustris BisB18, complete genome

Start: 4296981, End: 4297946, Length: 966

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014727:186000:186002186002186943942Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,ABC phosphate/phosphonate transporter, periplasmic component2e-0653.1
NC_018664:1:162511625117177927Clostridium acidurici 9a chromosome, complete genomeABC phosphonate transporter periplasmic phosphonate-binding protein1e-1067.4
NC_007760:535825:541082541082541933852Anaeromyxobacter dehalogenans 2CP-C, complete genomeABC phosphonate-binding periplasmic protein1e-1170.9
NC_009649:16907:358023580236665864Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,ABC-type phosphate/phosphonate transport system, periplasmic component6e-26118
NC_004193:375416:629961629961630923963Oceanobacillus iheyensis HTE831, complete genomealkylphosphonate ABC tranporter phosphate-binding protein2e-1480.1
NC_007907:4692336:471060247106024711510909Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0757.4
NC_007907:5185510:524762252476225248572951Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0860.8
NC_007613:4156841:4172539417253941735551017Shigella boydii Sb227, complete genomeperiplasmic binding protein component of Pn transporter2e-0860.1
NC_007384:4530000:4542148454214845431641017Shigella sonnei Ss046, complete genomeperiplasmic binding protein component of Pn transporter2e-0860.1
NC_007606:3842708:3848776384877638497921017Shigella dysenteriae Sd197, complete genomeperiplasmic binding protein component of Pn transporter2e-0860.1
NC_016822:4686971:4699075469907547000911017Shigella sonnei 53G, complete genomeperiplasmic binding protein component of Pn transporter2e-0860.1
NC_002695:5164819:5178183517818351791991017Escherichia coli O157:H7 str. Sakai, complete genomeperiplasmic binding protein component of Pn transporter1e-0860.8
NC_002655:5194804:5208168520816852091841017Escherichia coli O157:H7 EDL933, complete genomeperiplasmic binding protein component of Pn transporter1e-0860.8
NC_008253:4541915:4555934455593445569501017Escherichia coli 536, complete genomePhnD protein2e-0860.1
NC_008563:4656000:4669875466987546708911017Escherichia coli APEC O1, complete genomePhnD, subunit of alkylphosphonate ABC transporter2e-0860.1
NC_013939:1460142:147066214706621471519858Deferribacter desulfuricans SSM1, complete genomephosphate/phosphonate ABC transporter substrate-binding protein2e-1170.1
NC_009138:3153576:317292331729233173783861Herminiimonas arsenicoxydans, complete genomephosphite transport system binding protein ptxB precursor2e-22106
NC_011983:760113:760113760113761018906Agrobacterium radiobacter K84 chromosome 2, complete genomephosphonate ABC transporter8e-0754.7
NC_010511:3233884:323388432338843234813930Methylobacterium sp. 4-46 chromosome, complete genomephosphonate ABC transporter periplasmic phosphonate binding protein2e-0653.5
NC_011353:5240020:5253383525338352543991017Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephosphonate ABC transporter periplasmic phosphonate-binding protein1e-0860.8
NC_015422:2078618:208943220894322090292861Alicycliphilus denitrificans K601 chromosome, complete genomephosphonate ABC transporter periplasmic phosphonate-binding protein1e-24114
NC_015563:4773415:479700147970014797888888Delftia sp. Cs1-4 chromosome, complete genomephosphonate ABC transporter periplasmic phosphonate-binding protein2e-1686.7
NC_019902:831911:857637857637858536900Thioalkalivibrio nitratireducens DSM 14787, complete genomePhosphonate ABC transporter phosphate-binding periplasmic component7e-0961.6
NC_011415:4582388:4594610459461045956261017Escherichia coli SE11 chromosome, complete genomephosphonate ABC transporter substrate binding component2e-0860.1
NC_016902:4431235:4436246443624644372621017Escherichia coli KO11FL chromosome, complete genomephosphonate ABC transporter substrate-binding protein2e-0860.1
NC_013008:5196080:5209444520944452104601017Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephosphonate ABC transporter substrate-binding protein1e-0860.8
NC_012947:4106031:4110942411094241119581017Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephosphonate ABC transporter substrate-binding protein2e-0859.7
NC_013941:5013695:5027049502704950280651017Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphonate ABC transporter substrate-binding protein1e-0861.2
NC_010468:4305105:4309617430961743106331017Escherichia coli ATCC 8739, complete genomephosphonate ABC transporter, periplasmic phosphonate binding protein2e-0859.7
NC_014118:1331164:134478813447881345765978Burkholderia sp. CCGE1002 chromosome chromosome 2, completephosphonate ABC transporter, periplasmic phosphonate binding protein1e-0964.3
CP002516:4431235:4436246443624644372621017Escherichia coli KO11, complete genomephosphonate ABC transporter, periplasmic phosphonate binding protein2e-0860.1
NC_011830:1288984:129906312990631300052990Desulfitobacterium hafniense DCB-2, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-0757
NC_009720:4367584:438554843855484386516969Xanthobacter autotrophicus Py2, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein1e-133476
NC_010498:4656716:4668784466878446698001017Escherichia coli SMS-3-5, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-0859.7
NC_010002:2933909:294487329448732945751879Delftia acidovorans SPH-1, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein5e-25115
NC_008312:7635217:763521776352177636134918Trichodesmium erythraeum IMS101, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein5e-1272
NC_010501:4787963:480643248064324807286855Pseudomonas putida W619, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-0963.5
NC_009801:4643000:4655233465523346562491017Escherichia coli E24377A, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-0860.1
NC_009439:3535152:353617835361783537029852Pseudomonas mendocina ymp, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein7e-1168.6
NC_009800:4332229:4347854434785443488701017Escherichia coli HS, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-0860.1
NC_008740:1414926:143625514362551437118864Marinobacter aquaeolei VT8, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein5e-28125
NC_021150:1965264:196688519668851967736852Azotobacter vinelandii CA6, complete genomePhosphonate ABC transporter, substrate-binding protein7e-1168.2
NC_012560:1965251:196687219668721967723852Azotobacter vinelandii DJ, complete genomePhosphonate ABC transporter, substrate-binding protein7e-1168.2
NC_009659:3384997:340802434080243408884861Janthinobacterium sp. Marseille chromosome, complete genomephosphonate ABC-type transport system substrate-binding protein2e-22106
NC_007973:3240866:325173132517313252609879Ralstonia metallidurans CH34 chromosome 1, complete sequencePhosphonate-binding periplasmic protein5e-25115
NC_007492:2771021:278739127873912788242852Pseudomonas fluorescens PfO-1, complete genomePhosphonate-binding periplasmic protein3e-0859.7
NC_011751:4795928:4809389480938948104051017Escherichia coli UMN026 chromosome, complete genomephosphonate/organophosphate ester ABC transporter periplasmic binding protein2e-0860.1
NC_011750:4719477:4731623473162347326391017Escherichia coli IAI39 chromosome, complete genomephosphonate/organophosphate ester ABC transporter periplasmic binding protein2e-0859.7
NC_011741:4395156:4407196440719644082121017Escherichia coli IAI1 chromosome, complete genomephosphonate/organophosphate ester ABC transporter periplasmic-binding protein2e-0860.1
CP002185:4566150:4581774458177445827901017Escherichia coli W, complete genomephosphonate/organophosphate ester transporter subunit2e-0860.1
NC_012759:4247865:4260094426009442611101017Escherichia coli BW2952 chromosome, complete genomephosphonate/organophosphate ester transporter subunit2e-0860.1
NC_000913:4307471:4321359432135943223751017Escherichia coli K12, complete genomephosphonate/organophosphate ester transporter subunit2e-0860.1
NC_012967:4289929:4302150430215043031661017Escherichia coli B str. REL606 chromosome, complete genomephosphonate/organophosphate ester transporter subunit2e-0859.7
AC_000091:4313167:4328014432801443290301017Escherichia coli W3110 DNA, complete genomephosphonate/organophosphate ester transporter subunit2e-0860.1
NC_011748:4695932:4708082470808247090981017Escherichia coli 55989, complete genomephosphonate/organophosphate ester transporter subunit ; periplasmic binding component of ABC superfamily2e-0860.1
CU928160:4395156:4407196440719644082121017Escherichia coli IAI1 chromosome, complete genomephosphonate/organophosphate ester transporter subunit ; periplasmic binding component of ABC superfamily2e-0860.1
NC_011742:4569683:4584403458440345854191017Escherichia coli S88 chromosome, complete genomephosphonate/organophosphate ester transporter subunit ; periplasmic binding component of ABC superfamily2e-0860.1
CU928145:4695932:4708082470808247090981017Escherichia coli 55989 chromosome, complete genomephosphonate/organophosphate ester transporter subunit ; periplasmic binding component of ABC superfamily2e-0860.1
NC_013353:5022196:5034417503441750354331017Escherichia coli O103:H2 str. 12009, complete genomephosphonate/organophosphate ester transporter subunit PhnD2e-0860.1
AP010958:5022196:5034417503441750354331017Escherichia coli O103:H2 str. 12009 DNA, complete genomephosphonate/organophosphate ester transporter subunit PhnD2e-0860.1
NC_013364:5040268:5055937505593750569531017Escherichia coli O111:H- str. 11128, complete genomephosphonate/organophosphate ester transporter subunit PhnD2e-0860.1
NC_010473:4409492:4421721442172144227371017Escherichia coli str. K-12 substr. DH10B, complete genomephosphonate/organophosphate ester transporter subunit; periplasmic binding component of ABC superfamily2e-0860.1
NC_004431:4867648:4882368488236848833841017Escherichia coli CFT073, complete genomePhosphonates-binding periplasmic protein precursor2e-0860.1
NC_005070:1144777:116180611618061162726921Synechococcus sp. WH 8102, complete genomePutative phosphonate binding protein for ABC transporter5e-0755.5
NC_012811:1138897:114185211418521142724873Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative phosphonate transport system substrate-binding protein1e-1894
NC_015224:1641819:165641516564151657344930Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative substrate-binding periplasmic transport protein9e-0651.2
NC_008800:3123495:312934531293453130274930Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative substrate-binding periplasmic transport protein9e-0651.2