Pre_GI: BLASTP Hits

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Query: NC_007925:3933765:3937108 Rhodopseudomonas palustris BisB18, complete genome

Start: 3937108, End: 3939195, Length: 2088

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017082:6321124:6328590632859063306292040Bradyrhizobium sp. S23321, complete genomeATP-dependent OLD family endonuclease0810
NC_011768:79297:8994689946919612016Desulfatibacillum alkenivorans AK-01, complete genomeSMC domain protein2e-130467
NC_014507:906960:9169179169179188451929Methanoplanus petrolearius DSM 11571 chromosome, complete genomeSMC domain-containing protein9e-112404
NC_018868:619113:6601256601256620771953Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein3e-81303
NC_010465:3431500:3435097343509734371452049Yersinia pseudotuberculosis YPIII, complete genomeSMC (structural maintenance of chromosomes) family protein3e-80300
NC_016609:2150863:2167046216704621689921947Niastella koreensis GR20-10 chromosome, complete genomeATP-dependent OLD family endonuclease2e-54214
NC_016817:185000:2021482021482033381191Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequenceSMC (structural maintenance of chromosomes) family protein1e-41171
NC_008781:1038158:1047602104760210495151914Polaromonas naphthalenivorans CJ2, complete genomeATP-dependent endonuclease of the OLD family2e-35151
NC_013198:394000:4536564536564557462091Lactobacillus rhamnosus GG, complete genomepredicted ORF3e-29130
NS_000195:526983:5434625434625453511890Candidatus Cloacamonas acidaminovoranshypothetical protein3e-25117
NC_020260:603796:6273036273036287601458Cronobacter sakazakii Sp291, complete genomehypothetical protein6e-22106
NC_012691:1743038:1778403177840317803551953Tolumonas auensis DSM 9187, complete genomeRecF/RecN/SMC N domain protein2e-21104
NC_015416:621513:6320776320776339181842Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein7e-2099.8
NC_007760:3655433:3677752367775236795991848Anaeromyxobacter dehalogenans 2CP-C, complete genomeATP-dependent endonuclease of the OLD family-like9e-2099.4
NC_009659:1129066:1158048115804811598651818Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein1e-1998.6
NC_003064:22535:2460024600264681869Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein4e-1997.4
NC_003306:22228:2442824428261611734Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein3e-1997.4
NC_011740:2859933:2868232286823228702802049Escherichia fergusonii ATCC 35469, complete genomehypothetical protein4e-1997.1
NC_015660:3328595:3345598334559833475441947Geobacillus thermoglucosidasius C56-YS93 chromosome, completeSMC domain-containing protein4e-1997.1
NC_007760:3735749:3744893374489337471692277Anaeromyxobacter dehalogenans 2CP-C, complete genomeOLD family-like ATP-dependent endonuclease5e-1996.7
NC_007951:2087385:2102514210251421043551842Burkholderia xenovorans LB400 chromosome 1, complete sequencePredicted ATP-dependent endonuclease of the OLD family5e-1996.7
NC_003552:2634828:2644101264410126461702070Methanosarcina acetivorans C2A, complete genomehypothetical protein1e-1895.5
NC_003919:4618988:4636552463655246382341683Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-1894.7
NC_007907:5185510:5270756527075652728822127Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1791.7
NC_018645:3029785:3038101303810130402422142Desulfobacula toluolica Tol2, complete genomeDNA replication and repair protein, relted to recF2e-1791.7
NC_007974:2048000:2083641208364120854371797Ralstonia metallidurans CH34 chromosome 2, complete sequenceputative exonuclease8e-1789.4
NC_014311:3076519:3095153309515330969521800Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein2e-1688.2
NC_008435:4530797:4542885454288545446331749Rhodopseudomonas palustris BisA53, complete genomeATP-dependent endonuclease of the OLD family-like protein8e-1686.3
NC_016887:3201976:3214002321400232158101809Nocardia cyriacigeorgica GUH-2, complete genomeputative ATP-dependent endonuclease of the OLD family-like protein6e-1583.2
NC_013850:1753716:1761023176102317628071785Klebsiella variicola At-22 chromosome, complete genomehypothetical protein2e-1481.6
NC_020181:5130513:5143737514373751454881752Enterobacter aerogenes EA1509E, complete genomeATP-dependent endonuclease of the OLD family-like protein9e-1479.3
NC_016943:21364:2534925349270461698Blastococcus saxobsidens DD2, complete genomeputative exonuclease9e-1479.3
NC_011283:1178500:1185994118599411877451752Klebsiella pneumoniae 342 chromosome, complete genomeOLD family TOPRIM nucleotidyl transferase/hydrolase domain protein8e-1479.3
NC_013456:1843000:1849597184959718517412145Vibrio sp. Ex25 chromosome 1, complete genomepathogenesis related protein1e-1379
NC_021184:1484352:1502760150276015045771818Desulfotomaculum gibsoniae DSM 7213, complete genomeputative ATP-dependent endonuclease of the OLD family3e-1377.4
NC_010338:4108280:4127866412786641299412076Caulobacter sp. K31, complete genomeconserved hypothetical membrane spanning protein7e-1376.3
NC_012691:2614603:2652902265290226546891788Tolumonas auensis DSM 9187, complete genomehypothetical protein8e-1376.3
NC_002516:2113186:2120225212022521222221998Pseudomonas aeruginosa PAO1, complete genomehypothetical protein9e-1375.9
NC_013421:1780722:1780722178072217825121791Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-1274.7
NC_018866:1328623:1339251133925113413712121Dehalobacter sp. DCA chromosome, complete genomehypothetical protein3e-1274.3
NC_009075:15017:2882528825306091785Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein5e-1273.6
NC_015177:1822000:1839871183987118420122142Pedobacter saltans DSM 12145 chromosome, complete genomeSMC domain protein6e-1273.2
NC_009138:1974935:2008206200820620099901785Herminiimonas arsenicoxydans, complete genomehypothetical protein1e-1172.4
NC_010688:2781624:2832215283221528340021788Xanthomonas campestris pv. campestris, complete genomeHypothetical protein ybjD.1e-1172.4
NC_013131:7945280:7983002798300279850112010Catenulispora acidiphila DSM 44928, complete genomeATP-dependent OLD family endonuclease1e-1172
NC_008542:197500:2275572275572296262070Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceATP-dependent endonuclease of the OLD family-like protein1e-1172
NC_007929:1637261:1647690164769016497292040Lactobacillus salivarius subsp. salivarius UCC118, complete genomehypothetical protein7e-1169.7
NC_008752:725189:7360817360817382192139Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein8e-1169.7
NC_008609:1976403:2015460201546020175712112Pelobacter propionicus DSM 2379, complete genomehypothetical protein8e-1169.3
NC_019904:5308998:5319280531928053213012022Echinicola vietnamensis DSM 17526 chromosome, complete genomeOLD family ATP-dependent endonuclease1e-1068.6
NC_009792:3665369:3676649367664936787842136Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1068.2
NC_011206:262844:2789572789572812782322Acidithiobacillus ferrooxidans ATCC 53993, complete genomeATP-dependent endonuclease, OLD family3e-1067.8
NC_013132:5250385:5272842527284252751842343Chitinophaga pinensis DSM 2588, complete genomeATP-dependent endonuclease, OLD family4e-1067.4
NC_011901:2983555:2988278298827829903022025Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeATP-dependent OLD family endonuclease5e-1067
NC_007946:289425:2996222996223017692148Escherichia coli UTI89, complete genomehypothetical protein5e-1066.6
NC_017030:9818064:9827517982751798295202004Corallococcus coralloides DSM 2259 chromosome, complete genomeATP-dependent OLD family endonuclease1e-0965.5
NC_015138:2069739:2080545208054520829532409Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein2e-0965.1
NC_015422:2806832:2827485282748528295092025Alicycliphilus denitrificans K601 chromosome, complete genomeATP-dependent OLD family endonuclease4e-0963.9
NC_008463:5313527:5348012534801253504352424Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein5e-0963.5
NC_018867:10238:5389753897557921896Dehalobacter sp. CF chromosome, complete genomeputative ATP-dependent endonuclease of the OLD family5e-0963.5
NC_007651:3064530:3116914311691431192682355Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein2e-0861.6
NC_015379:908904:9647329647329669302199Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein2e-0861.6
NC_014803:709000:7142497142497160841836Pseudoalteromonas sp. SM9913 chromosome chromosome I, completehypothetical protein6e-0860.1
NC_008686:1383891:1409683140968314119172235Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein5e-0860.1
NC_009483:2136424:2142567214256721444891923Geobacter uraniireducens Rf4 chromosome, complete genomeATP-dependent OLD family endonuclease7e-0859.7
NC_014618:690056:7142527142527165672316Enterobacter cloacae SCF1 chromosome, complete genomeATP-dependent endonuclease7e-0859.7
NC_015733:3736104:3759442375944237617392298Pseudomonas putida S16 chromosome, complete genomehypothetical protein8e-0859.7
NC_017187:1564403:1579166157916615808781713Arcobacter butzleri ED-1, complete genomeputative endonuclease8e-0859.7
NC_010322:4623867:4639471463947146411951725Pseudomonas putida GB-1 chromosome, complete genomeSMC domain-containing protein2e-0758.5
NC_009076:3765441:3791874379187437935141641Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein2e-0758.2
NC_012880:3421500:3442349344234934443281980Dickeya dadantii Ech703, complete genomeputative exonuclease3e-0757.8
NC_015730:1918000:1924944192494419271842241Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein3e-0757.8
NC_015387:1091403:1098920109892011003771458Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeSMC domain protein4e-0757.4
NC_015977:935798:9475199475199492851767Roseburia hominis A2-183 chromosome, complete genomehypothetical protein5e-0757
NC_016901:3936944:3950612395061239523211710Shewanella baltica OS678 chromosome, complete genomehypothetical protein2e-0655.1
NC_009665:2219082:2229030222903022307391710Shewanella baltica OS185 chromosome, complete genomehypothetical protein2e-0655.1
NC_009997:3988980:4002648400264840043571710Shewanella baltica OS195, complete genomehypothetical protein2e-0655.1
NC_010617:774914:7909067909067929842079Kocuria rhizophila DC2201, complete genomehypothetical protein2e-0655.1
NC_007164:1434305:1467435146743514690661632Corynebacterium jeikeium K411, complete genomehypothetical protein2e-0655.1
NC_009801:3374501:3385117338511733869401824Escherichia coli E24377A, complete genomehypothetical protein2e-0654.7
NC_016902:44744:5839258392600921701Escherichia coli KO11FL chromosome, complete genomeSMC domain-containing protein4e-0653.9
CP002185:4035502:4045981404598140476811701Escherichia coli W, complete genomehypothetical protein4e-0653.9
CP002516:44744:5839258392600921701Escherichia coli KO11, complete genomeSMC domain-containing protein4e-0653.9
NC_007951:2904644:2921660292166029240082349Burkholderia xenovorans LB400 chromosome 1, complete sequencePredicted ATP-dependent endonuclease, OLD family5e-0653.5