Query: NC_007912:3921308 Saccharophagus degradans 2-40, complete genome
Start: 3921308, End: 3939099, Length: 17792
Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_007912:2958000* | 2958000 | 2981798 | 23799 | Saccharophagus degradans 2-40, complete genome | 0 | 3225 | BLASTN svg | BLASTP svg |
NC_007912:4396972* | 4396972 | 4421103 | 24132 | Saccharophagus degradans 2-40, complete genome | 0 | 3108 | BLASTN svg | BLASTP svg |
NC_007912:4840682 | 4840682 | 4859099 | 18418 | Saccharophagus degradans 2-40, complete genome | 0 | 2799 | BLASTN svg | BLASTP svg |
NC_007912:529500 | 529500 | 550402 | 20903 | Saccharophagus degradans 2-40, complete genome | 0 | 884 | BLASTN svg | BLASTP svg |
NC_007912:2303357 | 2303357 | 2327099 | 23743 | Saccharophagus degradans 2-40, complete genome | 6e-161 | 575 | BLASTN svg | BLASTP svg |
NC_007912:556000 | 556000 | 579122 | 23123 | Saccharophagus degradans 2-40, complete genome | 2e-160 | 573 | BLASTN svg | BLASTP svg |
NC_012997:4545875 | 4545875 | 4587876 | 42002 | Teredinibacter turnerae T7901, complete genome | 4e-51 | 210 | BLASTN svg | BLASTP svg |
NC_012997:1820734 | 1820734 | 1870805 | 50072 | Teredinibacter turnerae T7901, complete genome | 4e-48 | 200 | BLASTN svg | BLASTP svg |
NC_012997:4906423 | 4906423 | 4940599 | 34177 | Teredinibacter turnerae T7901, complete genome | 2e-43 | 184 | BLASTN svg | BLASTP svg |
NC_007912:335500 | 335500 | 359639 | 24140 | Saccharophagus degradans 2-40, complete genome | 1e-41 | 178 | BLASTN svg | BLASTP svg |
NC_012997:2254000 | 2254000 | 2281134 | 27135 | Teredinibacter turnerae T7901, complete genome | 5e-35 | 157 | BLASTN svg | BLASTP svg |
NC_007912:4125970 | 4125970 | 4151084 | 25115 | Saccharophagus degradans 2-40, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_007912:3828980 | 3828980 | 3854359 | 25380 | Saccharophagus degradans 2-40, complete genome | 4e-20 | 107 | BLASTN svg | BLASTP svg |
NC_013166:194614* | 194614 | 215724 | 21111 | Kangiella koreensis DSM 16069, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_012997:1335902 | 1335902 | 1359433 | 23532 | Teredinibacter turnerae T7901, complete genome | 9e-15 | 89.7 | BLASTN svg | BLASTP svg |
NC_015572:2713599 | 2713599 | 2736304 | 22706 | Methylomonas methanica MC09 chromosome, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_012997:541648* | 541648 | 567441 | 25794 | Teredinibacter turnerae T7901, complete genome | 3e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_012997:4152938 | 4152938 | 4179176 | 26239 | Teredinibacter turnerae T7901, complete genome | 3e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009997:2069894 | 2069894 | 2091599 | 21706 | Shewanella baltica OS195, complete genome | 3e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008700:1627401* | 1627401 | 1656122 | 28722 | Shewanella amazonensis SB2B, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |