Pre_GI: BLASTN Hits

Some Help

Query: NC_007912:3921308 Saccharophagus degradans 2-40, complete genome

Start: 3921308, End: 3939099, Length: 17792

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007912:2958000*2958000298179823799Saccharophagus degradans 2-40, complete genome03225BLASTN svgBLASTP svg
NC_007912:4396972*4396972442110324132Saccharophagus degradans 2-40, complete genome03108BLASTN svgBLASTP svg
NC_007912:48406824840682485909918418Saccharophagus degradans 2-40, complete genome02799BLASTN svgBLASTP svg
NC_007912:52950052950055040220903Saccharophagus degradans 2-40, complete genome0884BLASTN svgBLASTP svg
NC_007912:23033572303357232709923743Saccharophagus degradans 2-40, complete genome6e-161575BLASTN svgBLASTP svg
NC_007912:55600055600057912223123Saccharophagus degradans 2-40, complete genome2e-160573BLASTN svgBLASTP svg
NC_012997:45458754545875458787642002Teredinibacter turnerae T7901, complete genome4e-51210BLASTN svgBLASTP svg
NC_012997:18207341820734187080550072Teredinibacter turnerae T7901, complete genome4e-48200BLASTN svgBLASTP svg
NC_012997:49064234906423494059934177Teredinibacter turnerae T7901, complete genome2e-43184BLASTN svgBLASTP svg
NC_007912:33550033550035963924140Saccharophagus degradans 2-40, complete genome1e-41178BLASTN svgBLASTP svg
NC_012997:22540002254000228113427135Teredinibacter turnerae T7901, complete genome5e-35157BLASTN svgBLASTP svg
NC_007912:41259704125970415108425115Saccharophagus degradans 2-40, complete genome1e-20109BLASTN svgBLASTP svg
NC_007912:38289803828980385435925380Saccharophagus degradans 2-40, complete genome4e-20107BLASTN svgBLASTP svg
NC_013166:194614*19461421572421111Kangiella koreensis DSM 16069, complete genome2e-19105BLASTN svgBLASTP svg
NC_012997:13359021335902135943323532Teredinibacter turnerae T7901, complete genome9e-1589.7BLASTN svgBLASTP svg
NC_015572:27135992713599273630422706Methylomonas methanica MC09 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_012997:541648*54164856744125794Teredinibacter turnerae T7901, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_012997:41529384152938417917626239Teredinibacter turnerae T7901, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_009997:20698942069894209159921706Shewanella baltica OS195, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_008700:1627401*1627401165612228722Shewanella amazonensis SB2B, complete genome1e-0765.9BLASTN svgBLASTP svg