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Query: NC_007912:3828980 Saccharophagus degradans 2-40, complete genome

Start: 3828980, End: 3854359, Length: 25380

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007912:41259704125970415108425115Saccharophagus degradans 2-40, complete genome01239BLASTN svgBLASTP svg
NC_007912:45798734579873460015020278Saccharophagus degradans 2-40, complete genome3e-43184BLASTN svgBLASTP svg
NC_007912:29300632930063294834718285Saccharophagus degradans 2-40, complete genome3e-43184BLASTN svgBLASTP svg
NC_007912:33550033550035963924140Saccharophagus degradans 2-40, complete genome6e-26127BLASTN svgBLASTP svg
NC_007912:4396972*4396972442110324132Saccharophagus degradans 2-40, complete genome2e-22115BLASTN svgBLASTP svg
NC_007912:39213083921308393909917792Saccharophagus degradans 2-40, complete genome6e-20107BLASTN svgBLASTP svg