Pre_GI: BLASTP Hits

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Query: NC_007912:4661141:4681213 Saccharophagus degradans 2-40, complete genome

Start: 4681213, End: 4681485, Length: 273

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014366:354000:373619373619373861243Gamma proteobacterium HdN1, complete genomeDNA-directed RNA polymerase omega chain3e-1787
NC_013508:26348:324733247332748276Edwardsiella tarda EIB202, complete genomeDNA-directed RNA polymerase, subunit omega1e-1684.7
NC_005126:274000:290628290628290918291Photorhabdus luminescens subsp. laumondii TTO1, complete genomeDNA-directed RNA polymerase omega subunit2e-1684.7
NC_016816:127802:129931129931130206276Pantoea ananatis LMG 5342, complete genomeDNA-directed RNA polymerase subunit omega4e-1683.6
NC_013956:4326388:434453943445394344814276Pantoea ananatis LMG 20103 chromosome, complete genomeRpoZ4e-1683.6
NC_010694:63654:657976579766072276Erwinia tasmaniensis, complete genomeDNA-directed RNA polymerase omega chain5e-1683.2
NC_013961:73037:751807518075455276Erwinia amylovora, complete genomeDNA-directed RNA polymerase omega chain5e-1683.2
NC_013971:73037:751807518075455276Erwinia amylovora ATCC 49946 chromosome, complete genomeDNA-directed RNA polymerase subunit omega5e-1683.2
NC_004337:3590323:379242237924223792697276Shigella flexneri 2a str. 301, complete genomeDNA-directed RNA polymerase omega subunit1e-1582
NC_020260:4029951:404756340475634047838276Cronobacter sakazakii Sp291, complete genomeDNA-directed RNA polymerase subunit omega2e-1580.9
NC_009778:4014026:403162540316254031900276Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1580.9
NC_009648:4359875:437883943788394379114276Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA-directed RNA polymerase subunit omega2e-1580.9
NC_011094:3778000:381893838189383819213276Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-directed RNA polymerase subunit omega2e-1580.9
NC_011283:105245:105245105245105520276Klebsiella pneumoniae 342 chromosome, complete genomeDNA-directed RNA polymerase subunit omega2e-1580.9
NC_012731:5074000:509301950930195093294276Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeDNA-directed RNA polymerase subunit omega2e-1580.9
NC_016845:5162481:518149451814945181769276Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,DNA-directed RNA polymerase subunit omega2e-1580.9
NC_013716:4306695:439799943979994398274276Citrobacter rodentium ICC168, complete genomeDNA-directed RNA polymerase omega chain3e-1580.5
NC_014532:3967463:398471239847123984990279Halomonas elongata DSM 2581, complete genomeDNA-directed RNA polymerase subunit omega5e-1579.7
NC_009832:5369566:539112653911265391401276Serratia proteamaculans 568, complete genomeDNA-directed RNA polymerase, omega subunit6e-1579.7
NC_008800:36500:577415774158016276Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,DNA-directed RNA polymerase subunit omega1e-1479
NC_008309:1628939:165109316510931651365273Haemophilus somnus 129PT, complete genomeDNA-directed RNA polymerase, omega chain1e-1478.6
NC_020064:4751097:477141747714174771692276Serratia marcescens FGI94, complete genomeDNA-directed RNA polymerase, omega subunit2e-1478.2
NC_015381:992401:101896410189641019167204Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA-directed RNA polymerase subunit omega1e-1065.1
NC_009138:2110500:213021721302172130420204Herminiimonas arsenicoxydans, complete genomeDNA-directed RNA polymerase omega chain (RNAP omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit)9e-1062.4
NC_014752:617987:620224620224620430207Neisseria lactamica ST-640, complete genomeDNA-directed RNA polymerase omega chain2e-0961.2
NC_009483:3727490:373295637329563733165210Geobacter uraniireducens Rf4 chromosome, complete genomeDNA-directed RNA polymerase subunit omega3e-0960.5
NC_015722:4539:507750775448372Candidatus Midichloria mitochondrii IricVA chromosome, completeDNA-directed RNA polymerase subunit omega3e-0960.5
NC_007880:1456705:146332214633221463540219Francisella tularensis subsp. holarctica, complete genomeDNA-directed RNA polymerase omega subunit7e-0959.3
NC_011979:2352961:237947523794752379684210Geobacter sp. FRC-32, complete genomeDNA-directed RNA polymerase, omega subunit7e-0959.3
NC_008245:707984:721912721912722130219Francisella tularensis subsp. tularensis FSC 198, complete genomeDNA-directed RNA polymerase omega subunit1e-0858.9
NC_006570:707280:721960721960722178219Francisella tularensis subsp. tularensis Schu 4, complete genomeDNA-directed RNA polymerase omega subunit1e-0858.9
NC_008601:631504:645826645826646044219Francisella tularensis subsp. novicida U112, complete genomeDNA-directed RNA polymerase, subunit K/omega1e-0858.9
NC_016933:783938:797866797866798084219Francisella tularensis TIGB03 chromosome, complete genomeDNA-directed RNA polymerase subunit omega1e-0858.9
NC_016937:707279:721959721959722177219Francisella tularensis subsp. tularensis TI0902 chromosome,DNA-directed RNA polymerase subunit omega1e-0858.9
NC_007517:2632233:263444326344432634652210Geobacter metallireducens GS-15, complete genomeRNA polymerase, omega subunit1e-0858.5
NC_007498:1491223:150726115072611507467207Pelobacter carbinolicus DSM 2380, complete genomeDNA-directed RNA polymerase, omega subunit2e-0858.2
NC_015696:1749863:175984117598411760059219Francisella sp. TX077308 chromosome, complete genomeDNA-directed RNA polymerase subunit omega3e-0857.4
NC_010336:213148:240634240634240852219Francisella philomiragia subsp. philomiragia ATCC 25017, completeDNA-directed RNA polymerase, subunit K/omega5e-0856.6