Pre_GI: BLASTP Hits

Some Help

Query: NC_007912:4661141:4666419 Saccharophagus degradans 2-40, complete genome

Start: 4666419, End: 4667285, Length: 867

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013456:212150:216801216801217667867Vibrio sp. Ex25 chromosome 1, complete genomeprotein YicC1e-78293
NC_007645:6461267:647640864764086477274867Hahella chejuensis KCTC 2396, complete genomeuncharacterized stress-induced protein4e-77288
NC_016602:173314:178052178052178918867Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein1e-75283
NC_020064:4751097:475272447527244753587864Serratia marcescens FGI94, complete genomeTIGR00255 family protein2e-75282
NC_008322:373531:390942390942391805864Shewanella sp. MR-7, complete genomehypothetical protein5e-75281
NC_008700:367949:386521386521387450930Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein7e-75280
NC_016901:414670:431614431614432477864Shewanella baltica OS678 chromosome, complete genomeYicC-like domain-containing protein4e-74278
NC_009997:415808:432752432752433615864Shewanella baltica OS195, complete genomeYicC domain protein4e-74278
NC_008577:4533574:453824345382434539106864Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein6e-74277
NC_007963:3574000:357414435741443575007864Chromohalobacter salexigens DSM 3043, complete genomeconserved hypothetical protein 2551e-73276
NC_012880:135508:149849149849150712864Dickeya dadantii Ech703, complete genomeYicC domain protein1e-72273
NC_014532:3967463:397006739700673970930864Halomonas elongata DSM 2581, complete genomehypothetical protein2e-72272
NC_016816:127802:139590139590140453864Pantoea ananatis LMG 5342, complete genomeYicC domain-containing protein6e-72271
NC_012917:4646491:465062746506274651490864Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeYicC domain protein2e-71269
NC_009792:4658909:468199846819984682861864Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-71268
NC_007954:334795:356660356660357523864Shewanella denitrificans OS217, complete genomeconserved hypothetical protein 2554e-71268
NC_003197:3902500:392752139275213928384864Salmonella typhimurium LT2, complete genomeputative stress-induced protein5e-71268
NC_011094:3778000:380360738036073804470864Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein7e-71267
NC_013961:73037:957369573696599864Erwinia amylovora, complete genomeProtein yicC5e-71267
NC_013971:73037:957369573696599864Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein5e-71267
NC_011415:4040211:406486740648674065730864Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-70265
NC_004337:3590323:378699137869913787854864Shigella flexneri 2a str. 301, complete genomeputative alpha helix protein3e-70265
NC_010694:63654:783127831279175864Erwinia tasmaniensis, complete genomePredicted uncharacterized stress-induced protein3e-70265
NC_004547:138500:150683150683151546864Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-70264
NC_014500:4691915:469696946969694697832864Dickeya dadantii 3937 chromosome, complete genomehypothetical protein2e-69262
NC_009648:4359875:437116843711684372031864Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein8e-69260
NC_012731:5074000:508534850853485086211864Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein8e-69260
NC_016845:5162481:517382451738245174687864Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,K+-transporting ATPase8e-69260
NC_013850:109500:115536115536116399864Klebsiella variicola At-22 chromosome, complete genomeYicC domain protein7e-69260
NC_011283:105245:110340110340111203864Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein7e-69260
NC_003112:719490:741980741980742864885Neisseria meningitidis MC58, complete genomehypothetical protein7e-58224
NC_014307:1271121:129194712919471292882936Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein3e-52205
NC_009138:2110500:212856121285612129463903Herminiimonas arsenicoxydans, complete genomehypothetical protein8e-51200
NC_015381:992401:101730110173011018224924Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-49196
NC_016893:694587:712378712378713238861Wigglesworthia glossinidia endosymbiont of Glossina morsitansYicC family protein2e-44179
NC_020134:2193900:220135722013572202235879Clostridium stercorarium subsp. stercorarium DSM 8532, completeYicC-like protein9e-44177
NC_014410:1527405:152740515274051528280876Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,YicC domain protein5e-44177
NC_019970:1457794:146285614628561463731876Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeTIGR00255 family protein2e-43176
NC_009012:1595498:159964315996431600527885Clostridium thermocellum ATCC 27405, complete genomehypothetical protein5e-43174
NC_020291:1389114:140937714093771410258882Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeTIGR00255 family protein4e-41168
NC_004344:672550:690979690979691842864Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein4e-40165
NC_016148:1175999:118395811839581184878921Thermovirga lienii DSM 17291 chromosome, complete genomehypothetical protein6e-40164
NC_016627:3205333:320810332081033208981879Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein4e-39161
NC_007517:2632233:263543026354302636308879Geobacter metallireducens GS-15, complete genomehypothetical protein4e-38158
NC_011992:863174:885821885821886729909Acidovorax ebreus TPSY, complete genomedomain of unknown function DUF17327e-38157
NC_017138:980696:100195510019551002845891Bacillus megaterium WSH-002 chromosome, complete genomestress-induced protein1e-36153
NC_014109:27500:275062750628390885Candidatus Riesia pediculicola USDA chromosome, complete genomehypothetical protein3e-35149
NC_002570:2616899:263318926331892634073885Bacillus halodurans C-125, complete genomehypothetical protein4e-35148
NC_013891:1861294:186129418612941862169876Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomehypothetical protein5e-35148
NC_015873:1933036:193681819368181937705888Megasphaera elsdenii DSM 20460, complete genomehypothetical protein8e-35147
NC_008555:1874878:187706818770681877943876Listeria welshimeri serovar 6b str. SLCC5334, complete genomehypothetical protein2e-34146
NC_014657:914071:938012938012938893882Caldicellulosiruptor owensensis OL chromosome, complete genomehypothetical protein2e-34146
NC_021171:1354000:137340413734041374279876Bacillus sp. 1NLA3E, complete genomehypothetical protein2e-34146
NC_016011:1910638:191063819106381911513876Listeria ivanovii subsp. ivanovii PAM 55, complete genomehypothetical protein3e-34145
NC_011660:724711:740227740227741102876Listeria monocytogenes HCC23 chromosome, complete genomehypothetical protein6e-34144
NC_002973:1877905:188249618824961883371876Listeria monocytogenes str. 4b F2365, complete genomeconserved hypothetical protein TIGR002559e-34144
NC_009483:3727490:373392737339273734805879Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein2e-33142
NC_011979:2352961:237785623778562378734879Geobacter sp. FRC-32, complete genomeYicC domain protein2e-33142
NC_007498:1491223:150564715056471506564918Pelobacter carbinolicus DSM 2380, complete genomeconserved hypothetical protein TIGR002554e-33141
NC_013768:1983711:198830219883021989177876Listeria monocytogenes 08-5923, complete genomehypothetical protein5e-33141
NC_012796:3600630:368292936829293683810882Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-32140
NC_015682:205900:208508208508209389882Thermodesulfobacterium sp. OPB45 chromosome, complete genomehypothetical protein1e-31137
NC_011653:331986:337450337450338325876Thermosipho africanus TCF52B, complete genomehypothetical protein3e-30132
NC_013223:343344:365270365270366151882Desulfohalobium retbaense DSM 5692, complete genomedomain of unknown function DUF17323e-30132
NC_009616:99647:103880103880104752873Thermosipho melanesiensis BI429 chromosome, complete genomehypothetical protein8e-27120
NC_012785:1960500:198079019807901981662873Kosmotoga olearia TBF 19.5.1, complete genomedomain of unknown function DUF17321e-25117
NC_016751:1623756:162578016257801626655876Marinitoga piezophila KA3 chromosome, complete genomehypothetical protein3e-24112
NC_015846:493388:495334495334496176843Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein5e-24111
NC_004663:2509433:252423125242312525097867Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein2e-23109
NC_010830:718614:729576729576730466891Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein4e-21102