Pre_GI: BLASTP Hits

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Query: NC_007912:4125970:4139754 Saccharophagus degradans 2-40, complete genome

Start: 4139754, End: 4147295, Length: 7542

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007912:3828980:3846071384607138543598289Saccharophagus degradans 2-40, complete genomehypothetical protein0983
NC_007954:138410:1538731538731613667494Shewanella denitrificans OS217, complete genomeIntegrins alpha chain1e-172608
NC_010995:671389:6787986787986859977200Cellvibrio japonicus Ueda107, complete genomecarbohydrate binding protein, putative, cbp35B7e-167589
NC_018691:1864796:1897263189726319044537191Alcanivorax dieselolei B5 chromosome, complete genomeRhs family protein1e-77293
NC_015276:3321277:3325351332535133313265976Marinomonas mediterranea MMB-1 chromosome, complete genomeRHS repeat-associated core domain4e-72275
NC_010162:10676864:1068574910685749106924026654Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-63245
NC_009784:2129069:2145912214591221531987287Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein7e-61238
NC_008322:4611000:4622187462218746290386852Shewanella sp. MR-7, complete genomeYD repeat protein8e-57224
NC_017030:5785681:5790705579070557970856381Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein1e-49200
NC_002936:1319266:1326822132682213323265505Dehalococcoides ethenogenes 195, complete genomeNHL/RHS/YD repeat protein2e-49199
NC_015711:3193774:3203507320350732105297023Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein1e-48197
NC_014834:2264108:2281643228164322900998457Rhodopseudomonas palustris DX-1 chromosome, complete genomeYD repeat-containing protein7e-47191
NC_014041:3229867:3250910325091032573356426Zunongwangia profunda SM-A87 chromosome, complete genomeprotein containing RHS Repeat7e-47191
NC_004460:1313468:1321919132191913278495931Vibrio vulnificus CMCP6 chromosome II, complete sequenceRhs family protein1e-46190
NC_009615:3638451:3644261364426136504316171Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein3e-44182
NC_015571:168617:1721271721271784506324Porphyromonas gingivalis TDC60, complete genomehypothetical protein4e-41172
NC_010729:2038118:2041638204163820478956258Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein4e-41172
NC_017030:572871:5851885851885921386951Corallococcus coralloides DSM 2259 chromosome, complete genomeRhs family-like protein5e-40168
NC_015276:3321277:3332172333217233333231152Marinomonas mediterranea MMB-1 chromosome, complete genomeRHS repeat-associated core domain4e-32142
NC_015276:3321277:3333902333390233352631362Marinomonas mediterranea MMB-1 chromosome, complete genomeRHS repeat-associated core domain2e-32142
NC_016610:1974527:1974527197452719764611935Tannerella forsythia ATCC 43037 chromosome, complete genomeRHS repeat-associated core domain-containing protein3e-28129
NC_016610:1974527:1977357197735719792431887Tannerella forsythia ATCC 43037 chromosome, complete genomeRHS repeat-associated core domain-containing protein3e-28129
NC_016610:1974527:1981875198187519837791905Tannerella forsythia ATCC 43037 chromosome, complete genomeRHS repeat-associated core domain-containing protein2e-27126
NC_003552:2502689:2534487253448725411406654Methanosarcina acetivorans C2A, complete genomehypothetical protein6e-25118
NC_016109:1305368:1309850130985013168697020Kitasatospora setae KM-6054, complete genomehypothetical protein6e-23111
NC_014210:4188448:4196635419663542030726438Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,YD repeat protein3e-21105
NC_014507:1610409:1610409161040916144524044Methanoplanus petrolearius DSM 11571 chromosome, complete genomeYD repeat protein9e-21104
NC_004342:1744000:1756282175628217632476966Leptospira interrogans serovar Lai str. 56601 chromosome I,Rhs family protein1e-20103
NC_009380:1177316:1194880119488012017406861Salinispora tropica CNB-440 chromosome, complete genomeYD repeat-containing protein4e-20102
NC_010572:8352462:8384268838426883909006633Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein9e-20101
NC_007355:4358074:4358074435807443643646291Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein1e-19100
NC_011566:1016858:103128210312821031830549Shewanella piezotolerans WP3, complete genomeYD repeat protein4e-1999
NC_010729:2038118:2049047204904720504441398Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein5e-1998.6
NC_015571:168617:1799901799901813901401Porphyromonas gingivalis TDC60, complete genomeputative integrin subunit alpha6e-1998.6
NC_013093:5791961:5799746579974658066186873Actinosynnema mirum DSM 43827, complete genomeYD repeat protein1e-1897.1
NC_016610:1974527:1979961197996119814121452Tannerella forsythia ATCC 43037 chromosome, complete genomeRHS repeat-associated core domain-containing protein2e-1896.7
NC_009483:1448552:1462966146296614648521887Geobacter uraniireducens Rf4 chromosome, complete genomeYD repeat-containing protein5e-1895.5
NC_013929:4549988:4570978457097845773856408Streptomyces scabiei 87.22 chromosome, complete genomeligand-binding protein5e-1792
NC_009483:1448552:1466680146668014706663987Geobacter uraniireducens Rf4 chromosome, complete genomeYD repeat-containing protein6e-1792
NC_018524:5748421:5761760576176057682066447Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeRHS repeat-associated core domain protein6e-1791.7
NC_009380:4184695:4193635419363541996586024Salinispora tropica CNB-440 chromosome, complete genomeYD repeat-containing protein3e-1689.7
NC_014815:1490957:1494626149462615014176792Micromonospora sp. L5 chromosome, complete genomeyd repeat-containing protein4e-1689
NC_016627:1723104:1755569175556917598014233Clostridium clariflavum DSM 19732 chromosome, complete genome5e-1689
NC_014391:1226922:1230591123059112373376747Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein1e-1587.8
NC_002939:47406:5392553925602786354Geobacter sulfurreducens PCA, complete genomesalmonella virulence plasmid 65kDa B protein /YD repeat protein1e-1587.4
NC_010572:1:77227722141386417Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein7e-1585.1
NC_010572:8493946:8531792853179285382086417Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein7e-1585.1
NC_010572:8493946:77227722141386417Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein7e-1585.1
NC_017186:6108676:6117923611792361248106888Amycolatopsis mediterranei S699 chromosome, complete genomeRHS repeat-containing protein2e-1483.6
NC_014318:6108633:6117880611788061247676888Amycolatopsis mediterranei U32 chromosome, complete genomeRHS repeat-containing protein2e-1483.6
NC_014815:6576983:6583940658394065908276888Micromonospora sp. L5 chromosome, complete genomeyd repeat protein3e-1482.8
NC_021177:2241647:2249173224917322557036531Streptomyces fulvissimus DSM 40593, complete genomeYD repeat protein3e-1482.8
NC_009012:1:3874387497025829Clostridium thermocellum ATCC 27405, complete genomeYD repeat containing protein5e-1482
NC_009012:3823879:3874387497025829Clostridium thermocellum ATCC 27405, complete genomeYD repeat containing protein5e-1482
NC_007645:5747721:57599405759940577152811589Hahella chejuensis KCTC 2396, complete genomeRhs family protein5e-1482
NC_009012:1:1255512555180775523Clostridium thermocellum ATCC 27405, complete genomeYD repeat containing protein9e-1481.3
NC_017025:1651870:1668382166838216767728391Flavobacterium indicum GPTSA100-9, complete genome2e-1380.5
NC_014541:2736641:274727427472742748170897Ferrimonas balearica DSM 9799 chromosome, complete genomeYD repeat-containing protein2e-1380.1
NC_013521:107937:1151231151231182843162Sanguibacter keddieii DSM 10542, complete genomeRhs family protein3e-1379.7
NC_016627:2870900:28730942873094288521612123Clostridium clariflavum DSM 19732 chromosome, complete genomeRHS repeat-associated core domain-containing protein4e-1379.3
NC_007645:2112622:21126222112622212455211931Hahella chejuensis KCTC 2396, complete genomeRhs family protein3e-1379.3
NC_011979:1128986:1135225113522511392714047Geobacter sp. FRC-32, complete genomeYD repeat protein7e-1378.6
NC_016627:1723104:1728338172833817372628925Clostridium clariflavum DSM 19732 chromosome, complete genomeRHS repeat-associated core domain-containing protein1e-1277.4
NC_013216:3061491:3079669307966930834843816Desulfotomaculum acetoxidans DSM 771, complete genomeYD repeat protein1e-1277.4
NC_009012:1663357:1671219167121916769725754Clostridium thermocellum ATCC 27405, complete genomeYD repeat protein2e-1276.6
NC_011979:4062000:4075522407552240787373216Geobacter sp. FRC-32, complete genomeYD repeat protein3e-1276.6
NC_010729:2038118:2052907205290720540941188Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein3e-1275.9
NC_008009:5044612:5044612504461250494984887Acidobacteria bacterium Ellin345, complete genomeYD repeat protein4e-1275.9
NC_013061:1236235:1236235123623512397083474Pedobacter heparinus DSM 2366, complete genomeYD repeat-containing protein5e-1275.5
NC_010162:11908749:1193712611937126119443497224Sorangium cellulosum 'So ce 56', complete genomeRhs family protein7e-1275.1
NC_002967:1589069:1600897160089716108599963Treponema denticola ATCC 35405, complete genomeYD repeat protein8e-1274.7
NC_010162:9727465:97442389744238975450910272Sorangium cellulosum 'So ce 56', complete genomeRhsA protein precursor1e-1174.3
NC_016791:2888319:2900361290036129086378277Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein1e-1173.9
NC_007912:4579873:458543545854354586199765Saccharophagus degradans 2-40, complete genomeHam1-like protein2e-1173.2
NC_018524:4599809:4619731461973146257336003Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeRHS repeat-associated core domain protein3e-1172.8
NC_009012:3823879:3832532383253238375415010Clostridium thermocellum ATCC 27405, complete genomeYD repeat protein4e-1172.4
NC_010162:10894592:1090663210906632109160819450Sorangium cellulosum 'So ce 56', complete genomeRhs family carbohydrate-binding protein6e-1172
NC_010995:1459831:1466825146682514685701746Cellvibrio japonicus Ueda107, complete genomeParB-like nuclease domain8e-1171.6
NC_003155:320979:3294523294523365467095Streptomyces avermitilis MA-4680, complete genomelarge secreted protein2e-1070.1
NC_013929:3986272:3992523399252339997947272Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-1069.7
NC_009380:336024:3450063450063548279822Salinispora tropica CNB-440 chromosome, complete genomeYD repeat-containing protein4e-1069.3
NC_015275:3680323:3686723368672336959299207Clostridium lentocellum DSM 5427 chromosome, complete genomeRHS repeat-associated core domain protein5e-1068.9
NC_013851:608089:6168016168016180721272Allochromatium vinosum DSM 180 chromosome, complete genomehypothetical protein6e-1068.6
NC_014738:1742654:1751947175194717610849138Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,yd repeat protein3e-0966.6
NC_020125:2080126:2097145209714521062829138Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein3e-0966.6
NC_016791:3851454:38636243863624387462411001Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein3e-0966.6
NC_008095:8198970:8206615820661582160559441Myxococcus xanthus DK 1622, complete genomehypothetical protein2e-0966.6
NC_011979:4062000:4081438408143840853043867Geobacter sp. FRC-32, complete genomeYD repeat-containing protein3e-0966.2
NC_016627:1723104:1751383175138317533501968Clostridium clariflavum DSM 19732 chromosome, complete genomeRHS repeat-associated core domain-containing protein4e-0965.9
NC_013440:3977097:39770973977097398746710371Haliangium ochraceum DSM 14365, complete genomeYD repeat protein6e-0965.5
NC_016791:1620858:1642953164295316484275475Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein5e-0965.5
NC_017045:1902582:1911875191187519163984524Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,yd repeat protein5e-0965.5
NC_013722:2784000:279629527962952797293999Xanthomonas albilineans, complete genomehypothetical protein8e-0965.1
NC_015589:2999735:3006147300614730112195073Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeYD repeat protein1e-0864.7
NC_016791:2888319:2896432289643228994403009Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein1e-0864.3
NC_020541:2850831:2859185285918528602401056Rhodanobacter sp. 2APBS1, complete genomeRHS repeat-associated core domain protein1e-0863.9
NC_016593:3116145:3122850312285031285165667Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein2e-0863.5
NC_007954:138410:150507150507151472966Shewanella denitrificans OS217, complete genomehypothetical protein2e-0863.5
NC_015383:368500:3855573855573917366180Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequenceRhs family protein3e-0863.2
NC_013722:2476236:2487015248701524923545340Xanthomonas albilineans, complete genomeputative rhs family protein3e-0863.2
NC_019892:429975:4299754299754371207146Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRHS repeat-associated core domain-containing protein3e-0863.2
NC_003296:556836:5961885961885984132226Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE RHS-RELATED TRANSMEMBRANE PROTEIN3e-0862.8
NC_015160:1786350:1789371178937117940324662Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRHS repeat-associated core domain4e-0862.8
NC_003919:1491001:1498356149835615019553600Xanthomonas axonopodis pv. citri str. 306, complete genomewall-associated protein4e-0862.4
NC_016631:773511:7781187781187837995682Granulicella mallensis MP5ACTX8 chromosome, complete genomeRHS repeat-associated core domain-containing protein4e-0862.4
NC_015311:145215:1466711466711559049234Prevotella denticola F0289 chromosome, complete genomeRHS repeat-associated core domain-containing protein5e-0862.4
NC_008358:2638245:2648277264827726527584482Hyphomonas neptunium ATCC 15444, complete genomeYD repeat/RHS repeat protein5e-0862
NC_010995:948041:976207976207977100894Cellvibrio japonicus Ueda107, complete genomeParB-like nuclease domain1e-0761.2
NC_015953:4908069:4916907491690749221445238Streptomyces sp. SirexAA-E chromosome, complete genomeYD repeat-containing protein1e-0761.2
NC_010995:3945339:3961652396165239683896738Cellvibrio japonicus Ueda107, complete genomeRHS Repeat family1e-0761.2
NC_010995:948041:9778569778569804142559Cellvibrio japonicus Ueda107, complete genomeputative lipoprotein1e-0761.2
NC_020418:1364943:1370168137016813746104443Morganella morganii subsp. morganii KT, complete genomePutative toxin subunit1e-0760.8
NC_014963:113015:119102119102120019918Terriglobus saanensis SP1PR4 chromosome, complete genomehypothetical protein1e-0760.8
NC_020541:2850831:285737228573722858283912Rhodanobacter sp. 2APBS1, complete genomeRHS repeat-associated core domain protein1e-0760.8
NC_009455:173374:178952178952179650699Dehalococcoides sp. BAV1 chromosome, complete genomehypothetical protein2e-0760.5
NC_015144:900000:9099219099219134303510Weeksella virosa DSM 16922 chromosome, complete genomeRHS repeat-associated core domain protein2e-0760.5
NC_008358:2638245:2669587266958726720522466Hyphomonas neptunium ATCC 15444, complete genomeputative wall-associated protein2e-0760.1
NC_014819:25765:3404234042363242283Asticcacaulis excentricus CB 48 plasmid pASTEX02, completeYD repeat protein3e-0759.7
NC_009973:178000:2033322033322104567125Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeYD repeat-containing protein4e-0759.3
NC_009012:1663357:1664451166445116703305880Clostridium thermocellum ATCC 27405, complete genomeYD repeat protein3e-0759.3
NC_010830:1794559:1800587180058718081917605Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-0758.9
NC_012491:1838432:1864188186418818696535466Brevibacillus brevis NBRC 100599, complete genomehypothetical protein7e-0758.5
NC_018691:2254566:2273435227343522807487314Alcanivorax dieselolei B5 chromosome, complete genomeYD repeat protein7e-0758.5
NC_019904:2292954:23045192304519231481110293Echinicola vietnamensis DSM 17526 chromosome, complete genomeRHS repeat-associated core domain-containing protein6e-0758.5
NC_010162:9351179:9367135936713593744157281Sorangium cellulosum 'So ce 56', complete genomeinsecticidal toxin complex-like protein6e-0758.5
NC_002967:1589069:1611590161159016149703381Treponema denticola ATCC 35405, complete genomeYD repeat protein8e-0758.2
NC_020829:5382500:538912653891265390046921Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein9e-0758.2
NC_007645:2112622:2135942213594221375431602Hahella chejuensis KCTC 2396, complete genomeRhs family protein9e-0758.2
NC_017030:9465809:9483023948302394895806558Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein1e-0657.8
NC_019978:1182056:1195795119579512013565562Halobacteroides halobius DSM 5150, complete genomeRHS repeat-associated core domain protein1e-0657.8
NC_007645:2112622:2131310213131021327551446Hahella chejuensis KCTC 2396, complete genomeRhs family protein1e-0657.8
NC_003296:1665569:1684492168449216868582367Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE RHS-RELATED PROTEIN1e-0657.8
NC_007511:719493:7243637243637287034341Burkholderia sp. 383 chromosome 2, complete sequenceRhs family protein1e-0657.8
NC_014311:3348102:3355070335507033573582289Ralstonia solanacearum PSI07 chromosome, complete genomerhs-like protein2e-0657
NC_018750:3859127:3864922386492238695744653Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein2e-0657
NC_011979:4062000:4071464407146440736232160Geobacter sp. FRC-32, complete genomeYD repeat protein2e-0657
NC_014393:4352216:43633464363346437395010605Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein2e-0657
NC_019673:2185005:2200555220055522068966342Saccharothrix espanaensis DSM 44229 complete genomeRHS repeat-containing protein3e-0656.6
NC_016510:2579127:2586091258609125958199729Flavobacterium columnare ATCC 49512 chromosome, complete genomeyd repeat protein2e-0656.6
NC_013722:2848366:2858130285813028635685439Xanthomonas albilineans, complete genomeputative rhs family protein2e-0656.6
NC_014311:1309562:1316598131659813189192322Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein2e-0656.6
NC_004342:1744000:1763159176315917647631605Leptospira interrogans serovar Lai str. 56601 chromosome I,hypothetical protein2e-0656.6
NC_020541:1510782:1519890151989015236963807Rhodanobacter sp. 2APBS1, complete genomeRHS repeat-associated core domain protein2e-0656.6
NC_003552:2502689:2532488253248825338101323Methanosarcina acetivorans C2A, complete genomehypothetical protein3e-0656.2
NC_010506:1835910:1841082184108218422571176Shewanella woodyi ATCC 51908, complete genomehypothetical protein3e-0656.2
NC_007645:2112622:2133647213364721354731827Hahella chejuensis KCTC 2396, complete genomeRhs family protein3e-0656.2
NC_015947:280095:2889822889822927343753Burkholderia sp. JV3 chromosome, complete genomeRHS repeat-associated core domain-containing protein4e-0656.2
NC_010602:420284:4323174323174341881872Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'hypothetical protein4e-0655.8
NC_010842:425854:4378874378874397581872Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomehypothetical protein4e-0655.8
NC_008095:7172047:7178687717868771840835397Myxococcus xanthus DK 1622, complete genomeRhs family protein6e-0655.5
NC_014039:261126:2741892741892769812793Propionibacterium acnes SK137 chromosome, complete genomeYD repeat protein7e-0655.1
NC_007498:134442:1584801584801627634284Pelobacter carbinolicus DSM 2380, complete genomeRhs family protein7e-0655.1
NC_007954:138410:1467831467831483451563Shewanella denitrificans OS217, complete genomehypothetical protein8e-0655.1
NC_018691:3525430:3546371354637135505164146Alcanivorax dieselolei B5 chromosome, complete genomeYD repeat protein8e-0655.1
NC_012491:1838432:1846237184623718516275391Brevibacillus brevis NBRC 100599, complete genomehypothetical protein8e-0654.7
NC_007645:2112622:2125309212530921268111503Hahella chejuensis KCTC 2396, complete genomeRhs family protein9e-0654.7
NC_015425:369225:384449384449385354906Clostridium botulinum BKT015925 chromosome, complete genomeputative wall-associated protein9e-0654.7