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Query: NC_007912:3828980:3835207 Saccharophagus degradans 2-40, complete genome

Start: 3835207, End: 3836481, Length: 1275

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007912:2930063:2932444293244429339791536Saccharophagus degradans 2-40, complete genomehypothetical protein1e-95350
NC_015949:1301004:1306701130670113080441344Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomePectate lyase6e-31135
NC_012034:1925983:1932088193208819334701383Anaerocellum thermophilum DSM 6725, complete genomePectate lyase7e-30132
NC_014392:1769803:1773638177363817749691332Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomePectate lyase2e-29130
NC_003902:1416000:142846314284631429452990Xanthomonas campestris pv. campestris str. ATCC 33913, completeHrpW protein6e-2099
NC_013093:2895511:289551128955112896290780Actinosynnema mirum DSM 43827, complete genomePectate lyase7e-2098.6
NC_010688:3515885:351906535190653520054990Xanthomonas campestris pv. campestris, complete genomeglycosylhydrolase-like type III secretion system protein7e-2098.6
NC_013093:4890557:4915343491534349166351293Actinosynnema mirum DSM 43827, complete genomePectate lyase4e-1582.8
NC_013093:2895511:290321729032172904017801Actinosynnema mirum DSM 43827, complete genomePectate lyase1e-1481.3
NC_009480:31412:527085270853559852Clavibacter michiganensis subsp. michiganensis NCPPB 382, completehypothetical protein2e-0757.8
NC_009480:31412:690856908569936852Clavibacter michiganensis subsp. michiganensis NCPPB 382, completehypothetical protein2e-0757.4