Pre_GI: BLASTN Hits

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Query: NC_007793:606500 Staphylococcus aureus subsp. aureus USA300, complete genome

Start: 606500, End: 625565, Length: 19066

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010079:60700060700062610719108Staphylococcus aureus subsp. aureus USA300_TCH1516, complete08219BLASTN svgBLASTP svg
NC_007622:56750056750058887821379Staphylococcus aureus RF122, complete genome07735BLASTN svgBLASTP svg
NC_002952:61046261046263067520214Staphylococcus aureus subsp. aureus MRSA252, complete genome07884BLASTN svgBLASTP svg
NC_002745:59794759794761962721681Staphylococcus aureus subsp. aureus N315, complete genome08126BLASTN svgBLASTP svg
NC_002758:62200062200064387421875Staphylococcus aureus subsp. aureus Mu50, complete genome08126BLASTN svgBLASTP svg
NC_002953:58843758843761403425598Staphylococcus aureus subsp. aureus MSSA476, complete genome08155BLASTN svgBLASTP svg
NC_003923:59100059100061534324344Staphylococcus aureus subsp. aureus MW2, complete genome08155BLASTN svgBLASTP svg
NC_002951:62346162346164703323573Staphylococcus aureus subsp. aureus COL, complete genome08219BLASTN svgBLASTP svg
NC_007795:54178354178356019718415Staphylococcus aureus subsp. aureus NCTC 8325, complete genome08219BLASTN svgBLASTP svg
NC_013893:2373730*2373730239918425455Staphylococcus lugdunensis HKU09-01 chromosome, complete genome7e-96359BLASTN svgBLASTP svg
NC_007168:24153612415361243618320823Staphylococcus haemolyticus JCSC1435, complete genome1e-47198BLASTN svgBLASTP svg
NC_002952:88450088450090389519396Staphylococcus aureus subsp. aureus MRSA252, complete genome1e-44188BLASTN svgBLASTP svg
NC_002745:84084884084886459823751Staphylococcus aureus subsp. aureus N315, complete genome9e-43182BLASTN svgBLASTP svg
NC_002951:49535495357109921565Staphylococcus aureus subsp. aureus COL, complete genome5e-38167BLASTN svgBLASTP svg
NC_002976:15407941540794156113820345Staphylococcus epidermidis RP62A, complete genome2e-37165BLASTN svgBLASTP svg
NC_011567:1*13972539725Anoxybacillus flavithermus WK1, complete genome4e-23117BLASTN svgBLASTP svg
NC_014976:2231984*2231984225555323570Bacillus subtilis BSn5 chromosome, complete genome9e-0660BLASTN svgBLASTP svg