Pre_GI: BLASTP Hits

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Query: NC_007793:1574456:1588081 Staphylococcus aureus subsp. aureus USA300, complete genome

Start: 1588081, End: 1588410, Length: 330

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017338:1517723:155542315554231555752330Staphylococcus aureus subsp. aureus JKD6159 chromosome, completebacteriophage transcriptional regulator3e-54209
NC_017337:321155:324512324512324841330Staphylococcus aureus subsp. aureus ED133 chromosome, completephage repressor3e-54209
NC_009782:920272:921713921713922042330Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein3e-54209
NC_010079:1564327:160202816020281602357330Staphylococcus aureus subsp. aureus USA300_TCH1516, completepossible bacteriophage transcriptional regulator3e-54209
NC_002758:918827:920268920268920597330Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein3e-54209
NC_014251:243700:260223260223260963741Streptococcus pneumoniae TCH8431/19A chromosome, complete genomebifunctional S24 family peptidase/transcriptional regulator5e-0959.7
NC_016048:751000:769269769269769643375Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein3e-0753.9
NC_015558:1389369:140974514097451410500756Streptococcus parauberis KCTC 11537 chromosome, complete genomephage repressor-like protein4e-0753.5
NC_014551:865254:871752871752872057306Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein8e-0752.4
NC_014925:578759:585077585077585781705Staphylococcus pseudintermedius HKU10-03 chromosome, completePhage repressor3e-0650.4
NC_010079:2102856:212387321238732124586714Staphylococcus aureus subsp. aureus USA300_TCH1516, completepossible bifunctional S24 family peptidase/transcriptional regulator4e-0650.1
NC_014727:1832144:185419718541971854565369Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,transcriptional regulator (xre family)1e-0548.9